2.400 Å
X-ray
2009-04-14
Name: | Dihydropteroate synthase |
---|---|
ID: | Q81VW8_BACAN |
AC: | Q81VW8 |
Organism: | Bacillus anthracis |
Reign: | Bacteria |
TaxID: | 1392 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 100 % |
B-Factor: | 60.203 |
---|---|
Number of residues: | 21 |
Including | |
Standard Amino Acids: | 20 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.610 | 668.250 |
% Hydrophobic | % Polar |
---|---|
42.42 | 57.58 |
According to VolSite |
HET Code: | B62 |
---|---|
Formula: | C7H11N5O |
Molecular weight: | 181.195 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 60.79 % |
Polar Surface area: | 91.54 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 5 |
H-Bond Donors: | 4 |
Rings: | 2 |
Aromatic rings: | 0 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 0 |
X | Y | Z |
---|---|---|
-63.3916 | 59.7397 | 137.371 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
N10 | OD1 | ASP- 101 | 3.16 | 150.56 | H-Bond (Ligand Donor) |
N4 | ND2 | ASN- 120 | 3.24 | 142.27 | H-Bond (Protein Donor) |
N13 | OD1 | ASN- 120 | 2.71 | 168.67 | H-Bond (Ligand Donor) |
C9 | CG2 | ILE- 122 | 4.13 | 0 | Hydrophobic |
N2 | OD1 | ASP- 184 | 2.79 | 140.28 | H-Bond (Ligand Donor) |
N13 | OD1 | ASP- 184 | 2.82 | 139.01 | H-Bond (Ligand Donor) |
C8 | CZ | PHE- 189 | 3.71 | 0 | Hydrophobic |
O12 | NZ | LYS- 220 | 2.78 | 149.62 | H-Bond (Protein Donor) |
C11 | CE | LYS- 220 | 4.27 | 0 | Hydrophobic |
O12 | O | HOH- 279 | 3.05 | 165.38 | H-Bond (Protein Donor) |