Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1wdt | GTP | Elongation factor G (EF-G-2) |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 1wdt | GTP | Elongation factor G (EF-G-2) | / | 1.000 | |
| 2q3f | GNP | Ras-related GTP-binding protein D | / | 0.535 | |
| 3mjh | GTP | Ras-related protein Rab-5A | / | 0.519 | |
| 4d0l | GSP | Ras-related protein Rab-11A | / | 0.510 | |
| 5ftc | ADP | TPR domain protein | / | 0.495 | |
| 5c46 | GSP | Ras-related protein Rab-11A | / | 0.494 | |
| 4f9f | GDP | Putative glycosyltransferase | / | 0.491 | |
| 2ic5 | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.488 | |
| 4gh5 | NAD | Short-chain dehydrogenase/reductase SDR | / | 0.488 | |
| 4o2r | GDP | GTP-binding protein Rheb | / | 0.487 | |
| 4j5r | A1R | O-acetyl-ADP-ribose deacetylase 1 | 3.5.1 | 0.485 | |
| 1rj9 | GCP | Signal recognition particle receptor FtsY | / | 0.484 | |
| 1zem | NAD | Xylitol dehydrogenase | / | 0.483 | |
| 2rc3 | NAD | CBS domain | / | 0.483 | |
| 4g01 | GDP | Ras-related protein RABF2b | / | 0.483 | |
| 1t0l | NAP | Isocitrate dehydrogenase [NADP] cytoplasmic | 1.1.1.42 | 0.482 | |
| 2fg5 | GNP | Ras-related protein Rab-31 | / | 0.482 | |
| 1tu3 | GNP | Ras-related protein Rab-5A | / | 0.481 | |
| 4pan | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.481 | |
| 1v8k | ANP | Kinesin-like protein KIF2C | / | 0.480 | |
| 1ky2 | GNP | GTP-binding protein YPT7 | / | 0.479 | |
| 1n6l | GTP | Ras-related protein Rab-5A | / | 0.479 | |
| 2qbu | SAH | Precorrin-2 methyltransferase | / | 0.479 | |
| 2uzu | L20 | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.477 | |
| 1o8c | NDP | Probable acrylyl-CoA reductase AcuI | 1.3.1.84 | 0.476 | |
| 2xtn | GTP | GTPase IMAP family member 2 | / | 0.476 | |
| 2nnl | NAP | Dihydroflavonol 4-reductase | 1.1.1.219 | 0.474 | |
| 2nry | STU | Interleukin-1 receptor-associated kinase 4 | 2.7.11.1 | 0.474 | |
| 4g1z | 0VP | Vitamin D3 receptor A | / | 0.474 | |
| 3t1t | GDP | Probable gliding protein mglA | / | 0.472 | |
| 4fid | GDP | G protein alpha subunit, putative | / | 0.472 | |
| 2fe4 | GDP | Ras-related protein Rab-6B | / | 0.471 | |
| 3etd | NDP | Glutamate dehydrogenase 1, mitochondrial | 1.4.1.3 | 0.471 | |
| 4g1d | 0VK | Vitamin D3 receptor A | / | 0.471 | |
| 1cs4 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.470 | |
| 3biy | 01K | Histone acetyltransferase p300 | / | 0.470 | |
| 3qbt | GNP | Ras-related protein Rab-8A | / | 0.470 | |
| 2ch6 | ADP | N-acetyl-D-glucosamine kinase | 2.7.1.59 | 0.469 | |
| 2p2l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.469 | |
| 3kkv | B99 | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.469 | |
| 4aa5 | NQB | Mitogen-activated protein kinase 14 | / | 0.467 | |
| 4iaf | ADP | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.467 | |
| 1cx4 | CMP | cAMP-dependent protein kinase type II-beta regulatory subunit | / | 0.466 | |
| 3nga | 3NG | Casein kinase II subunit alpha | 2.7.11.1 | 0.466 | |
| 4dbz | NDP | Putative ketoacyl reductase | 1.3.1 | 0.466 | |
| 4luc | GDP | GTPase KRas | / | 0.466 | |
| 4mq1 | 2C3 | Dual specificity tyrosine-phosphorylation-regulated kinase 1A | 2.7.12.1 | 0.466 | |
| 2oor | NAD | NAD(P) transhydrogenase subunit alpha part 1 | 1.6.1.2 | 0.465 | |
| 3iph | G11 | Mitogen-activated protein kinase 14 | / | 0.465 | |
| 4tuv | CPZ | Cytochrome P450 119 | 1.14 | 0.465 | |
| 4xnh | ACO | N-terminal acetyltransferase A complex subunit NAT5 | 2.3.1 | 0.465 | |
| 1jay | F42 | F420-dependent NADP reductase | / | 0.464 | |
| 1mh1 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.464 | |
| 1uu9 | BI3 | 3-phosphoinositide-dependent protein kinase 1 | 2.7.11.1 | 0.464 | |
| 3iae | D7K | Benzaldehyde lyase | / | 0.464 | |
| 1q4u | 4CA | 4-hydroxybenzoyl-CoA thioesterase | 3.1.2.23 | 0.463 | |
| 3atr | FDA | Conserved Archaeal protein | / | 0.462 | |
| 3lqf | NAD | Galactitol dehydrogenase | / | 0.462 | |
| 3ref | GDP | Rho family GTPase | / | 0.462 | |
| 3s87 | ADP | Ribonucleoside-diphosphate reductase large chain 1 | 1.17.4.1 | 0.462 | |
| 3wfj | NAD | 2-dehydropantoate 2-reductase | / | 0.462 | |
| 3jvv | ACP | Twitching mobility protein | / | 0.461 | |
| 4kwh | NAP | Reductase homolog | / | 0.461 | |
| 5l3r | GCP | Cell division protein FtsY homolog, chloroplastic | / | 0.461 | |
| 2c29 | NAP | Dihydroflavonol 4-reductase | / | 0.460 | |
| 2ic5 | GNP | Ras-related C3 botulinum toxin substrate 3 | / | 0.460 | |
| 2ww4 | ADP | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase | 2.7.1.148 | 0.460 | |
| 3gy0 | NAP | NAD(P)-dependent oxidoreductase | / | 0.460 | |
| 3o7l | ANP | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.460 | |
| 3r9x | GNP | GTPase Era | / | 0.460 | |
| 3vhx | GTP | ADP-ribosylation factor 6 | / | 0.460 | |
| 4rf2 | NAP | NADPH dependent R-specific alcohol dehydrogenase | / | 0.460 | |
| 4uj3 | GNP | Ras-related protein Rab-11A | / | 0.460 | |
| 5d3q | GDP | Dynamin-1 | 3.6.5.5 | 0.460 | |
| 5di3 | GNP | ADP-ribosylation factor-like protein 3 | / | 0.460 | |
| 1azt | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.459 | |
| 1u7t | NAD | 3-hydroxyacyl-CoA dehydrogenase type-2 | 1.1.1.35 | 0.459 | |
| 2yvg | NAD | Ferredoxin reductase | / | 0.459 | |
| 3cph | GDP | Ras-related protein SEC4 | / | 0.459 | |
| 4dpw | AGS | Mevalonate diphosphate decarboxylase | / | 0.459 | |
| 4ia1 | BIV | Vitamin D3 receptor A | / | 0.459 | |
| 4mdh | NAD | Malate dehydrogenase, cytoplasmic | 1.1.1.37 | 0.459 | |
| 4z5w | ILE_THR_GLN_TYS_TYS | Phytosulfokine receptor 1 | 2.7.11.1 | 0.459 | |
| 1gil | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.458 | |
| 1w06 | W05 | Isopenicillin N synthase | 1.21.3.1 | 0.458 | |
| 2f7z | 6EA | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.458 | |
| 2giv | ACO | Histone acetyltransferase KAT8 | / | 0.458 | |
| 3phi | NDP | Shikimate dehydrogenase (NADP(+)) | / | 0.458 | |
| 3sfe | FAD | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial | / | 0.458 | |
| 4bkz | 1WS | Maternal embryonic leucine zipper kinase | 2.7.11.1 | 0.458 | |
| 4fg7 | ATP | Calcium/calmodulin-dependent protein kinase type 1 | 2.7.11.17 | 0.458 | |
| 4l7f | 1V5 | Mitogen-activated protein kinase 8 | 2.7.11.24 | 0.458 | |
| 4n3c | UD1 | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit | / | 0.458 | |
| 2uzf | CAA | 1,4-dihydroxy-2-naphthoyl-CoA synthase | / | 0.457 | |
| 3pe2 | E1B | Casein kinase II subunit alpha | 2.7.11.1 | 0.457 | |
| 5lc1 | NAD | L-threonine 3-dehydrogenase | / | 0.457 | |
| 1adf | TAD | Alcohol dehydrogenase E chain | 1.1.1.1 | 0.456 | |
| 3q4z | ANP | Serine/threonine-protein kinase PAK 1 | 2.7.11.1 | 0.456 | |
| 4gl4 | NAI | Alcohol dehydrogenase class-3 | / | 0.456 | |
| 4xvr | GNP | GTPase HRas | / | 0.456 | |
| 1w4z | NAP | Putative ketoacyl reductase | 1.3.1 | 0.455 | |
| 2rgo | FAD | Alpha-Glycerophosphate Oxidase | / | 0.455 | |
| 3k4c | FAD | Pyranose 2-oxidase | / | 0.455 | |
| 2fsv | NAD | NAD(P) transhydrogenase subunit alpha part 1 | 1.6.1.2 | 0.454 | |
| 4dfg | 0JV | Gag-Pol polyprotein | 3.4.23.16 | 0.454 | |
| 4gkv | NAD | Alcohol dehydrogenase, propanol-preferring | 1.1.1.1 | 0.454 | |
| 4gyy | 12V | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit | / | 0.454 | |
| 4h8n | NDP | NADPH-dependent conjugated polyketone reductase C2 | / | 0.454 | |
| 1e3w | NAD | 3-hydroxyacyl-CoA dehydrogenase type-2 | 1.1.1.35 | 0.453 | |
| 1pr9 | NAP | L-xylulose reductase | 1.1.1.10 | 0.453 | |
| 1ptj | SND | NAD(P) transhydrogenase subunit alpha part 1 | 1.6.1.2 | 0.453 | |
| 2gvd | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.453 | |
| 2v1x | ADP | ATP-dependent DNA helicase Q1 | 3.6.4.12 | 0.453 | |
| 3bxz | ADP | Protein translocase subunit SecA | / | 0.453 | |
| 3rv6 | VAE | Salicylate synthase | / | 0.453 | |
| 3tgp | GNP | GTPase HRas | / | 0.453 | |
| 3ums | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.453 | |
| 3wd9 | QPC | cAMP-specific 3',5'-cyclic phosphodiesterase 4B | 3.1.4.53 | 0.453 | |
| 4fog | C2F | Thymidylate synthase ThyA | / | 0.453 | |
| 4iqg | NAP | Short-chain dehydrogenase/reductase SDR | / | 0.453 | |
| 4ite | TEY | Vitamin D3 receptor | / | 0.453 | |
| 4p53 | NAI | 2-epi-5-epi-valiolone synthase | / | 0.453 | |
| 4q03 | GDP | GTPase KRas | / | 0.453 | |
| 5e8w | STU | TGF-beta receptor type-1 | 2.7.11.30 | 0.453 | |
| 5l3s | GNP | Signal recognition particle receptor FtsY | / | 0.453 | |
| 1uae | UD1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | / | 0.452 | |
| 1x14 | NAD | NAD(P) transhydrogenase subunit alpha | 1.6.1.2 | 0.452 | |
| 1ybm | NAP | Uncharacterized protein At5g02240 | / | 0.452 | |
| 2c1b | CQP | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.452 | |
| 2cmj | NAP | Isocitrate dehydrogenase [NADP] cytoplasmic | 1.1.1.42 | 0.452 | |
| 2g0n | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.452 | |
| 2vpr | TDC | Tetracycline repressor protein class H | / | 0.452 | |
| 2ztm | NAD | D(-)-3-hydroxybutyrate dehydrogenase | / | 0.452 | |
| 3pcr | GTP | ADP-ribosylation factor 6 | / | 0.452 | |
| 3qe0 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.452 | |
| 3tjz | GNP | ADP-ribosylation factor 1 | / | 0.452 | |
| 4opg | FDA | Conserved Archaeal protein | / | 0.452 | |
| 1am4 | GNP | Cell division control protein 42 homolog | / | 0.451 | |
| 1pd9 | CO4 | Dihydrofolate reductase | 1.5.1.3 | 0.451 | |
| 1xkv | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.451 | |
| 2q29 | ACO | Oxalyl-CoA decarboxylase | 4.1.1.8 | 0.451 | |
| 3d8b | ADP | Fidgetin-like protein 1 | 3.6.4 | 0.451 | |
| 3jyn | NDP | Quinone oxidoreductase | / | 0.451 | |
| 3mt8 | 17T | Glycogen phosphorylase, muscle form | 2.4.1.1 | 0.451 | |
| 3suf | SUE | Polyprotein | / | 0.451 | |
| 4z61 | ILE_THR_GLN_TYS_TYS | Phytosulfokine receptor 1 | 2.7.11.1 | 0.451 | |
| 4z87 | 5GP | Inosine-5'-monophosphate dehydrogenase | / | 0.451 | |
| 1xe5 | 5FE | Plasmepsin-2 | 3.4.23.39 | 0.450 | |
| 2qfx | NDP | Isocitrate dehydrogenase [NADP], mitochondrial | 1.1.1.42 | 0.450 | |
| 2w06 | FRV | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.450 | |
| 3nxx | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.450 | |
| 4b5b | BBE | Glucose-1-phosphate thymidylyltransferase | / | 0.450 | |
| 4d5g | FAD | Cyclohexane-1,2-dione hydrolase | 3.7.1.11 | 0.450 | |
| 4hbn | CMP | Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 | / | 0.450 | |
| 1kol | NAD | Glutathione-independent formaldehyde dehydrogenase | / | 0.449 | |
| 1okk | GCP | Signal recognition particle protein | / | 0.449 | |
| 1okk | GCP | Signal recognition particle receptor FtsY | / | 0.449 | |
| 2bu2 | ATP | [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial | 2.7.11.2 | 0.449 | |
| 2chz | 093 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform | 2.7.1.153 | 0.449 | |
| 2q2v | NAD | Beta-D-hydroxybutyrate dehydrogenase | / | 0.449 | |
| 2ql6 | ADP | Nicotinamide riboside kinase 1 | / | 0.449 | |
| 2xck | MH4 | 3-phosphoinositide-dependent protein kinase 1 | 2.7.11.1 | 0.449 | |
| 2zb3 | NDP | Prostaglandin reductase 2 | 1.3.1.48 | 0.449 | |
| 3aty | FMN | Prostaglandin F2a synthase | / | 0.449 | |
| 3c0i | 3AM | Peripheral plasma membrane protein CASK | 2.7.11.1 | 0.449 | |
| 3oib | FDA | Putative acyl-CoA dehydrogenase | / | 0.449 | |
| 3qrw | NDP | Putative ketoacyl reductase | 1.3.1 | 0.449 | |
| 3vt7 | VDX | Vitamin D3 receptor | / | 0.449 | |
| 4fsr | HKC | Serine/threonine-protein kinase Chk1 | 2.7.11.1 | 0.449 | |
| 4u97 | STU | Interleukin-1 receptor-associated kinase 4 | 2.7.11.1 | 0.449 | |
| 5jsf | NAD | 17-beta-hydroxysteroid dehydrogenase 14 | 1.1.1 | 0.449 | |
| 1bv9 | XV6 | Gag-Pol polyprotein | 3.4.23.16 | 0.448 | |
| 1fwk | ADP | Homoserine kinase | 2.7.1.39 | 0.448 | |
| 1g1a | NAD | dTDP-glucose 4,6-dehydratase | / | 0.448 | |
| 1het | NAD | Alcohol dehydrogenase E chain | 1.1.1.1 | 0.448 | |
| 2ddo | ATP | Pyridoxine/pyridoxal/pyridoxamine kinase | / | 0.448 | |
| 2igo | FAD | Pyranose 2-oxidase | / | 0.448 | |
| 2ojj | 82A | Mitogen-activated protein kinase 1 | 2.7.11.24 | 0.448 | |
| 3aw9 | NAD | NAD-dependent epimerase/dehydratase | / | 0.448 | |
| 3ndr | NAD | Pyridoxal 4-dehydrogenase | 1.1.1.107 | 0.448 | |
| 3qfa | FAD | Thioredoxin reductase 1, cytoplasmic | 1.8.1.9 | 0.448 | |
| 4aa4 | QC0 | Mitogen-activated protein kinase 14 | / | 0.448 | |
| 4dd8 | BAT | Disintegrin and metalloproteinase domain-containing protein 8 | 3.4.24 | 0.448 | |
| 4dlb | NAD | S-(hydroxymethyl)glutathione dehydrogenase | / | 0.448 | |
| 4is3 | NAD | 3alpha-hydroxy bile acid-CoA-ester 3-dehydrogenase 2 | 1.17.98.1 | 0.448 | |
| 4z3d | NDP | Carbonyl reductase [NADPH] 1 | 1.1.1.184 | 0.448 | |
| 1bxk | NAD | dTDP-glucose 4,6-dehydratase 2 | / | 0.447 | |
| 1ojt | FAD | Dihydrolipoyl dehydrogenase | / | 0.447 | |
| 1z7y | AA5 | Cysteine synthase 1 | 2.5.1.47 | 0.447 | |
| 2c27 | ACO | Mycothiol acetyltransferase | 2.3.1.189 | 0.447 | |
| 2vhx | NAD | Alanine dehydrogenase | 1.4.1.1 | 0.447 | |
| 2vna | NAP | Prostaglandin reductase 2 | 1.3.1.48 | 0.447 | |
| 2xtz | GSP | Guanine nucleotide-binding protein alpha-1 subunit | / | 0.447 | |
| 3c14 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.447 | |
| 3gxl | QIG | TGF-beta receptor type-1 | 2.7.11.30 | 0.447 | |
| 3kjs | NAP | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.447 | |
| 3of4 | FMN | Nitroreductase | / | 0.447 | |
| 3r83 | Z14 | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.447 | |
| 4c7k | NAP | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.447 | |
| 4l3l | 5FI | Ribosomal protein S6 kinase beta-1 | 2.7.11.1 | 0.447 | |
| 5cb3 | APR | O-acetyl-ADP-ribose deacetylase | / | 0.447 | |
| 5fkl | TDC | Tetracycline repressor protein class D | / | 0.447 | |
| 1cbq | RE9 | Cellular retinoic acid-binding protein 2 | / | 0.446 | |
| 1emd | NAD | Malate dehydrogenase | / | 0.446 | |
| 1h47 | C5P | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | 4.6.1.12 | 0.446 | |
| 1orr | NAD | CDP-paratose 2-epimerase | / | 0.446 | |
| 1t2a | NDP | GDP-mannose 4,6 dehydratase | 4.2.1.47 | 0.446 | |
| 2ad5 | ADP | CTP synthase | / | 0.446 | |
| 2cgp | CMP | cAMP-activated global transcriptional regulator CRP | / | 0.446 | |
| 2jj2 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.446 | |
| 3a5o | ATP | Major actin | / | 0.446 | |
| 3b6z | CO7 | Enoyl reductase LovC | 1 | 0.446 | |
| 3flw | FLW | Mitogen-activated protein kinase 14 | / | 0.446 | |
| 3r37 | 4CO | 4-hydroxybenzoyl-CoA thioesterase | 3.1.2.23 | 0.446 | |
| 4g1y | 0VO | Vitamin D3 receptor A | / | 0.446 | |
| 4jx1 | CAH | Camphor 5-monooxygenase | 1.14.15.1 | 0.446 | |
| 4y0v | GDP | ADP-ribosylation factor 1, putative | / | 0.446 | |
| 5uvi | ZMA | Adenosine receptor A2a | / | 0.446 | |
| 1mvs | DTM | Dihydrofolate reductase | 1.5.1.3 | 0.445 | |
| 1qm5 | PLP | Maltodextrin phosphorylase | 2.4.1.1 | 0.445 | |
| 1tj2 | FAD | Bifunctional protein PutA | 1.5.5.2 | 0.445 | |
| 1z7e | ATP | Bifunctional polymyxin resistance protein ArnA | / | 0.445 | |
| 2ivp | ATP | tRNA N6-adenosine threonylcarbamoyltransferase | / | 0.445 | |
| 3e2s | FAD | Bifunctional protein PutA | 1.5.5.2 | 0.445 | |
| 3fsk | RO6 | Mitogen-activated protein kinase 14 | / | 0.445 | |
| 3mje | NDP | AmphB | / | 0.445 | |
| 3veu | 0GO | Beta-secretase 1 | 3.4.23.46 | 0.445 | |
| 4a2a | ATP | Cell division protein FtsA | / | 0.445 | |
| 4fv7 | E94 | Mitogen-activated protein kinase 1 | 2.7.11.24 | 0.445 | |
| 4ia3 | BIV | Vitamin D3 receptor A | / | 0.445 | |
| 4px9 | ADP | ATP-dependent RNA helicase DDX3X | 3.6.4.13 | 0.445 | |
| 4qai | FMN | NADPH dehydrogenase | / | 0.445 | |
| 4tvb | NAD | Homospermidine synthase | 2.5.1.44 | 0.445 | |
| 5a88 | ADP | Riboflavin biosynthesis protein RibF | 2.7.1.26 | 0.445 | |
| 5dp2 | NAP | CurF | / | 0.445 | |
| 1hon | GNH | Adenylosuccinate synthetase | / | 0.444 | |
| 1w7h | 3IP | Mitogen-activated protein kinase 14 | / | 0.444 | |
| 2c12 | FAD | Nitroalkane oxidase | 1.7.3.1 | 0.444 | |
| 2j3k | NAP | NADPH-dependent oxidoreductase 2-alkenal reductase | 1.3.1.74 | 0.444 | |
| 2qo9 | ANP | Ephrin type-A receptor 3 | 2.7.10.1 | 0.444 | |
| 2wdz | NAD | Galactitol dehydrogenase | / | 0.444 | |
| 3qlr | NDP | Dihydrofolate reductase | 1.5.1.3 | 0.444 | |
| 4s34 | ANP | Mitogen-activated protein kinase 1 | 2.7.11.24 | 0.444 | |
| 1f28 | UMP | Thymidylate synthase | 2.1.1.45 | 0.443 | |
| 1mei | MOA | Inosine-5'-monophosphate dehydrogenase | / | 0.443 | |
| 1s22 | ATP | Actin, alpha skeletal muscle | / | 0.443 | |
| 1txi | TX5 | Vitamin D3 receptor | / | 0.443 | |
| 1xts | GTP | GTP-binding protein Rheb | / | 0.443 | |
| 2an9 | GDP | Guanylate kinase | 2.7.4.8 | 0.443 | |
| 2c0c | NAP | Prostaglandin reductase 3 | 1 | 0.443 | |
| 2exm | ZIP | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.443 | |
| 2q4b | NAP | Uncharacterized protein At5g02240 | / | 0.443 | |
| 2qo5 | CHD | Fatty acid-binding protein 10-A, liver basic | / | 0.443 | |
| 2uzw | SS4 | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.443 | |
| 2wyv | NAD | Enoyl-[acyl-carrier-protein] reductase [NADH] | / | 0.443 | |
| 3b20 | NAD | Glyceraldehyde-3-phosphate dehydrogenase | / | 0.443 | |
| 3fly | FLY | Mitogen-activated protein kinase 14 | / | 0.443 | |
| 3ixj | 586 | Beta-secretase 1 | 3.4.23.46 | 0.443 | |
| 3r4b | 74T | Gag-Pol polyprotein | / | 0.443 | |
| 4dc0 | NDP | Putative ketoacyl reductase | 1.3.1 | 0.443 | |
| 4dc1 | NDP | Putative ketoacyl reductase | 1.3.1 | 0.443 | |
| 4ez8 | DHF | Thymidylate synthase | 2.1.1.45 | 0.443 | |
| 4fry | NAD | Putative signal-transduction protein with CBS domains | / | 0.443 | |
| 1db1 | VDX | Vitamin D3 receptor | / | 0.442 | |
| 1gia | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.442 | |
| 1ie8 | KH1 | Vitamin D3 receptor | / | 0.442 | |
| 1mes | DMP | Gag-Pol polyprotein | 3.4.23.16 | 0.442 | |
| 1xtr | GNP | GTP-binding protein Rheb | / | 0.442 | |
| 3baz | NAP | Hydroxyphenylpyruvate reductase | 1.1.1.237 | 0.442 | |
| 3bv2 | P38 | Mitogen-activated protein kinase 14 | / | 0.442 | |
| 3r0i | C0K | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 1.1.1.267 | 0.442 | |
| 3sxp | NAD | ADP-L-glycero-D-mannoheptose-6-epimerase | / | 0.442 | |
| 3uyl | TYD | Probable NDP-rhamnosyltransferase | / | 0.442 | |
| 4xb2 | NDP | 319aa long hypothetical homoserine dehydrogenase | / | 0.442 | |
| 4y8v | ADP | Acyl-CoA synthetase (NDP forming) | / | 0.442 | |
| 4yai | NAI | C alpha-dehydrogenase | / | 0.442 | |
| 5il1 | SAM | N6-adenosine-methyltransferase 70 kDa subunit | / | 0.442 | |
| 1kqc | FMN | Oxygen-insensitive NAD(P)H nitroreductase | / | 0.441 | |
| 1o0s | NAI | NAD-dependent malic enzyme, mitochondrial | 1.1.1.38 | 0.441 | |
| 1oix | GDP | Ras-related protein Rab-11A | / | 0.441 | |
| 1qlh | NAD | Alcohol dehydrogenase E chain | 1.1.1.1 | 0.441 | |
| 1u8v | FAD | 4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase | / | 0.441 | |
| 1w6h | TIT | Plasmepsin-2 | 3.4.23.39 | 0.441 | |
| 1xzq | FON | tRNA modification GTPase MnmE | 3.6.5 | 0.441 | |
| 1yu9 | GNP | Ras-related protein Rab-4A | / | 0.441 | |
| 2cgu | 3A3 | Serine/threonine-protein kinase Chk1 | 2.7.11.1 | 0.441 | |
| 2cl6 | CAG | GTPase HRas | / | 0.441 | |
| 2dgn | DOI | Adenylosuccinate synthetase isozyme 1 | / | 0.441 | |
| 2exl | GDM | Endoplasmin | / | 0.441 | |
| 2gn8 | NAP | UDP-N-acetylglucosamine 4,6-dehydratase (inverting) | 4.2.1.115 | 0.441 | |
| 2h2a | DND | Probable nicotinate-nucleotide adenylyltransferase | / | 0.441 | |
| 2hk9 | NAP | Shikimate dehydrogenase (NADP(+)) | / | 0.441 | |
| 2xlr | FAD | Putative flavin-containing monooxygenase | / | 0.441 | |
| 2xy9 | 3ES | Angiotensin-converting enzyme | 3.2.1 | 0.441 | |
| 2y3s | TIR | TamL | / | 0.441 | |
| 2zgz | GNP | Plasmid segregation protein ParM | / | 0.441 | |
| 3ll9 | ADP | Isopentenyl phosphate kinase | / | 0.441 | |
| 3rhd | NAP | Lactaldehyde dehydrogenase | 1.2.1.22 | 0.441 | |
| 3sqz | COA | Putative hydroxymethylglutaryl-CoA synthase | / | 0.441 | |
| 3v94 | WYQ | Phosphodiesterase | / | 0.441 | |
| 3wt0 | ATP | Cell division protein FtsA | / | 0.441 | |
| 1z2a | GDP | Ras-related protein Rab-23 | / | 0.440 | |
| 2oby | NAP | Quinone oxidoreductase PIG3 | 1 | 0.440 | |
| 2vo6 | M05 | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.440 | |
| 3dm6 | 757 | Beta-secretase 1 | 3.4.23.46 | 0.440 | |
| 3fln | 3FN | Mitogen-activated protein kinase 14 | / | 0.440 | |
| 3inm | NDP | Isocitrate dehydrogenase [NADP] cytoplasmic | 1.1.1.42 | 0.440 | |
| 3kko | GNP | Ras-related protein M-Ras | / | 0.440 | |
| 3q71 | AR6 | Poly [ADP-ribose] polymerase 14 | 2.4.2.30 | 0.440 | |
| 3r7w | GNP | GTP-binding protein GTR2 | / | 0.440 | |
| 4dh6 | 0KN | Beta-secretase 1 | 3.4.23.46 | 0.440 | |
| 4ike | ADP | Adenylate kinase | / | 0.440 | |
| 4jk3 | NAD | Uncharacterized protein | / | 0.440 | |
| 4ma6 | 28E | Ara h 8 allergen | / | 0.440 | |
| 4p13 | FAD | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial | 1.3.8.7 | 0.440 | |
| 4rhe | FMN | Flavin prenyltransferase UbiX | / | 0.440 | |
| 4z43 | FAD | Flavin-dependent tryptophan halogenase PrnA | 1.14.19.9 | 0.440 |