1.650 Å
X-ray
2001-06-01
| Name: | F420-dependent NADP reductase |
|---|---|
| ID: | FNO_ARCFU |
| AC: | O29370 |
| Organism: | Archaeoglobus fulgidus |
| Reign: | Archaea |
| TaxID: | 224325 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| B | 100 % |
| B-Factor: | 18.287 |
|---|---|
| Number of residues: | 22 |
| Including | |
| Standard Amino Acids: | 21 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 0 |
| Cofactors: | NAP |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.824 | 340.875 |
| % Hydrophobic | % Polar |
|---|---|
| 55.45 | 44.55 |
| According to VolSite | |

| HET Code: | F42 |
|---|---|
| Formula: | C29H32N5O18P |
| Molecular weight: | 769.561 g/mol |
| DrugBank ID: | DB03913 |
| Buried Surface Area: | 26.25 % |
| Polar Surface area: | 389.68 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 20 |
| H-Bond Donors: | 7 |
| Rings: | 3 |
| Aromatic rings: | 1 |
| Anionic atoms: | 4 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 3 |
| Rotatable Bonds: | 20 |
| X | Y | Z |
|---|---|---|
| -5.19162 | 28.4376 | -1.47474 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C8 | CB | PRO- 136 | 3.53 | 0 | Hydrophobic |
| C5A | CG2 | THR- 192 | 3.93 | 0 | Hydrophobic |
| C8 | CG2 | ILE- 195 | 3.99 | 0 | Hydrophobic |
| C1' | CD2 | LEU- 196 | 3.7 | 0 | Hydrophobic |
| C9 | CD2 | LEU- 196 | 3.93 | 0 | Hydrophobic |
| C9 | SD | MET- 199 | 4.12 | 0 | Hydrophobic |
| O3' | OE2 | GLU- 206 | 3.27 | 156.66 | H-Bond (Ligand Donor) |
| O8M | N | LEU- 207 | 2.83 | 146.31 | H-Bond (Protein Donor) |
| O8M | O | LEU- 207 | 2.67 | 160.35 | H-Bond (Ligand Donor) |
| O4 | O2D | NAP- 213 | 2.6 | 164.8 | H-Bond (Protein Donor) |
| O2' | O7N | NAP- 213 | 2.87 | 152.58 | H-Bond (Ligand Donor) |