sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 5l3s | GNP | Signal recognition particle receptor FtsY |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 5l3s | GNP | Signal recognition particle receptor FtsY | / | 1.321 | |
| 5l3r | GCP | Cell division protein FtsY homolog, chloroplastic | / | 1.149 | |
| 2j7p | GNP | Signal recognition particle protein | / | 1.096 | |
| 2j7p | GNP | Signal recognition particle receptor FtsY | / | 1.096 | |
| 1rj9 | GCP | Signal recognition particle receptor FtsY | / | 1.087 | |
| 1okk | GCP | Signal recognition particle protein | / | 1.012 | |
| 1okk | GCP | Signal recognition particle receptor FtsY | / | 1.012 | |
| 1cul | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.887 | |
| 2hf8 | GSP | Probable hydrogenase nickel incorporation protein HypB | / | 0.873 | |
| 3pit | GNP | Ras-related protein M-Ras | / | 0.855 | |
| 4g0n | GNP | GTPase HRas | / | 0.852 | |
| 2j0s | ANP | Eukaryotic initiation factor 4A-III | 3.6.4.13 | 0.847 | |
| 3a4l | ANP | L-seryl-tRNA(Sec) kinase | 2.7.1.164 | 0.843 | |
| 1w5t | ANP | ORC1-type DNA replication protein 2 | / | 0.840 | |
| 2qtv | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.840 | |
| 1esn | ANP | Pantothenate kinase | 2.7.1.33 | 0.838 | |
| 3rsl | GNP | GTPase HRas | / | 0.837 | |
| 3rs0 | GNP | GTPase HRas | / | 0.835 | |
| 4dlz | GNP | GTPase HRas | / | 0.835 | |
| 4l9w | GNP | GTPase HRas | / | 0.835 | |
| 3oiv | GNP | GTPase HRas | / | 0.833 | |
| 4dsn | GCP | GTPase KRas | / | 0.832 | |
| 3b1x | GNP | Ferrous iron transport protein B | / | 0.831 | |
| 3bc1 | GNP | Ras-related protein Rab-27A | / | 0.831 | |
| 4jsy | GTP | Metallophosphoesterase | / | 0.831 | |
| 3x1z | GNP | Ras-related protein Rap-1b | / | 0.828 | |
| 5dif | GNP | GTP-binding nuclear protein Ran | / | 0.825 | |
| 2xtz | GSP | Guanine nucleotide-binding protein alpha-1 subunit | / | 0.821 | |
| 3i3s | GNP | GTPase HRas | / | 0.821 | |
| 3lbn | GNP | GTPase HRas | / | 0.821 | |
| 3rab | GNP | Ras-related protein Rab-3A | / | 0.821 | |
| 3rs5 | GNP | GTPase HRas | / | 0.821 | |
| 3rs7 | GNP | GTPase HRas | / | 0.821 | |
| 4dlv | GNP | GTPase HRas | / | 0.821 | |
| 2rgc | GNP | GTPase HRas | / | 0.818 | |
| 3qbt | GNP | Ras-related protein Rab-8A | / | 0.818 | |
| 4xjx | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.818 | |
| 1n6l | GTP | Ras-related protein Rab-5A | / | 0.817 | |
| 4oi4 | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.817 | |
| 2qme | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.816 | |
| 3k9l | GNP | GTPase HRas | / | 0.814 | |
| 4xvq | GNP | GTPase HRas | / | 0.814 | |
| 4idn | GNP | Atlastin-1 | 3.6.5 | 0.813 | |
| 3adc | ANP | L-seryl-tRNA(Sec) kinase | 2.7.1.164 | 0.812 | |
| 5di3 | GNP | ADP-ribosylation factor-like protein 3 | / | 0.809 | |
| 3l8y | GNP | GTPase HRas | / | 0.806 | |
| 3oiw | GNP | GTPase HRas | / | 0.806 | |
| 2fg5 | GNP | Ras-related protein Rab-31 | / | 0.805 | |
| 2gil | GTP | Ras-related protein Rab-6A | / | 0.805 | |
| 3kko | GNP | Ras-related protein M-Ras | / | 0.805 | |
| 3lbh | GNP | GTPase HRas | / | 0.805 | |
| 4dlt | GNP | GTPase HRas | / | 0.805 | |
| 3tso | GNP | Ras-related protein Rab-25 | / | 0.804 | |
| 1bmf | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.803 | |
| 1bmf | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.803 | |
| 3e5h | GNP | Ras-related protein Rab-28 | / | 0.803 | |
| 4dlx | GNP | GTPase HRas | / | 0.803 | |
| 1xtr | GNP | GTP-binding protein Rheb | / | 0.802 | |
| 1w5s | ADP | ORC1-type DNA replication protein 2 | / | 0.801 | |
| 1zc3 | GNP | Ras-related protein Ral-A | / | 0.800 | |
| 2q3f | GNP | Ras-related GTP-binding protein D | / | 0.800 | |
| 3law | GNP | Ras-related protein Rab-7a | / | 0.800 | |
| 4qm6 | GTP | Metallophosphoesterase | / | 0.800 | |
| 1ayl | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.796 | |
| 3q9l | ATP | Septum site-determining protein MinD | / | 0.795 | |
| 4tl7 | ATP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.794 | |
| 2bme | GNP | Ras-related protein Rab-4A | / | 0.793 | |
| 4rkf | GNP | Ras-related protein Rab-3 | / | 0.793 | |
| 1vg8 | GNP | Ras-related protein Rab-7a | / | 0.792 | |
| 4lhv | GDP | Ras-related protein Rab-8A | / | 0.792 | |
| 1kmq | GNP | Transforming protein RhoA | / | 0.791 | |
| 1yzq | GNP | Ras-related protein Rab-6A | / | 0.790 | |
| 2gcp | GSP | Rho-related GTP-binding protein RhoC | / | 0.789 | |
| 4dls | GNP | GTPase HRas | / | 0.789 | |
| 2rgg | GNP | GTPase HRas | / | 0.788 | |
| 3wyf | GTP | GTP-binding nuclear protein | / | 0.788 | |
| 3rs4 | GNP | GTPase HRas | / | 0.787 | |
| 4nyi | GNP | GTPase HRas | / | 0.786 | |
| 3tgp | GNP | GTPase HRas | / | 0.785 | |
| 4qxa | GTP | Ras-related protein Rab-9A | / | 0.785 | |
| 1yu9 | GNP | Ras-related protein Rab-4A | / | 0.784 | |
| 2jlr | ANP | Genome polyprotein | 3.4.21.91 | 0.783 | |
| 4pao | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.783 | |
| 5dha | GNP | GTP-binding nuclear protein Ran | / | 0.783 | |
| 2j5x | GSP | ADP-ribosylation factor 6 | / | 0.782 | |
| 2ov2 | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.782 | |
| 4hdo | GNP | Ras-related protein Rap-1b | / | 0.782 | |
| 1cs4 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.780 | |
| 1mh1 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.779 | |
| 1zcb | GDP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.778 | |
| 2bc9 | GNP | Guanylate-binding protein 1 | / | 0.778 | |
| 2cls | GTP | Rho-related GTP-binding protein Rho6 | / | 0.778 | |
| 4lhw | GNP | Ras-related protein Rab-8A | / | 0.778 | |
| 1gia | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.777 | |
| 1u0h | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.776 | |
| 1zd9 | GDP | ADP-ribosylation factor-like protein 8A | / | 0.776 | |
| 4goj | GNP | ADP-ribosylation factor-like protein 3 | / | 0.775 | |
| 1ky2 | GNP | GTP-binding protein YPT7 | / | 0.772 | |
| 1loo | GTP | Adenylosuccinate synthetase isozyme 1 | / | 0.771 | |
| 3mjh | GTP | Ras-related protein Rab-5A | / | 0.771 | |
| 1gp2 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.770 | |
| 1ibr | GNP | GTP-binding nuclear protein Ran | / | 0.769 | |
| 3w3z | GTP | GTP-binding nuclear protein Ran | / | 0.769 | |
| 4ohv | ANP | Protein clpf-1 | / | 0.769 | |
| 4be7 | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.768 | |
| 1z2a | GDP | Ras-related protein Rab-23 | / | 0.766 | |
| 3onw | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.766 | |
| 4g5q | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.766 | |
| 4xvr | GNP | GTPase HRas | / | 0.766 | |
| 1h65 | GDP | Translocase of chloroplast 34 | 3.6.5 | 0.765 | |
| 3dt2 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.764 | |
| 3vhx | GTP | ADP-ribosylation factor 6 | / | 0.764 | |
| 3dt4 | GTP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.763 | |
| 1z2c | GNP | Rho-related GTP-binding protein RhoC | / | 0.762 | |
| 3c16 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.762 | |
| 4tlb | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.762 | |
| 4xvu | ATP | ATPase GET3 | / | 0.762 | |
| 1gqy | ACP | UDP-N-acetylmuramate--L-alanine ligase | 6.3.2.8 | 0.761 | |
| 3ea5 | GDP | GTP-binding nuclear protein Ran | / | 0.761 | |
| 4nyj | GNP | GTPase HRas | / | 0.761 | |
| 1jx2 | ADP | Myosin-2 heavy chain | / | 0.760 | |
| 2jiz | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.760 | |
| 4nh0 | ATP | ESX secretion system protein EccC | / | 0.759 | |
| 5aun | ADP | Iron-sulfur cluster carrier protein | / | 0.759 | |
| 1gil | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.758 | |
| 3tnf | GNP | Ras-related protein Rab-8A | / | 0.758 | |
| 1m2o | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.757 | |
| 2ic5 | GNP | Ras-related C3 botulinum toxin substrate 3 | / | 0.757 | |
| 2olq | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.757 | |
| 2ffq | GSP | Ras-related protein Rab-6B | / | 0.753 | |
| 3a58 | GNP | GTP-binding protein RHO1 | / | 0.752 | |
| 5jlj | GNP | GTP-binding nuclear protein Ran | / | 0.752 | |
| 3th5 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.750 | |
| 4o25 | GTP | GTP-binding protein Rheb | / | 0.750 | |
| 4v02 | ATP | Site-determining protein | / | 0.750 | |
| 3myk | ANP | Myosin-2 heavy chain | / | 0.749 | |
| 3q5d | GDP | Atlastin-1 | 3.6.5 | 0.749 | |
| 2rgb | GNP | GTPase HRas | / | 0.747 | |
| 2rge | GNP | GTPase HRas | / | 0.747 | |
| 3k8y | GNP | GTPase HRas | / | 0.747 | |
| 1azt | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.746 | |
| 3sbe | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.746 | |
| 4gp6 | ADP | Metallophosphoesterase | / | 0.746 | |
| 1e79 | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.745 | |
| 1e79 | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.745 | |
| 1oix | GDP | Ras-related protein Rab-11A | / | 0.744 | |
| 4dvg | GSP | Rho family GTPase | / | 0.743 | |
| 4idp | GNP | Atlastin-1 | 3.6.5 | 0.742 | |
| 1uad | GNP | Ras-related protein Ral-A | / | 0.740 | |
| 2ck3 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.740 | |
| 2ck3 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.740 | |
| 3i5x | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.739 | |
| 4ike | ADP | Adenylate kinase | / | 0.739 | |
| 2bku | GTP | GTP-binding nuclear protein Ran | / | 0.738 | |
| 3oeh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.738 | |
| 4bec | ATP | Type I restriction enzyme EcoR124II R protein | 3.1.21.3 | 0.738 | |
| 4g01 | GDP | Ras-related protein RABF2b | / | 0.738 | |
| 4jld | ADP | Adenylate kinase | / | 0.738 | |
| 3ftq | GNP | Septin-2 | / | 0.737 | |
| 4k81 | GTP | GTPase HRas | / | 0.736 | |
| 5c46 | GSP | Ras-related protein Rab-11A | / | 0.734 | |
| 2xtn | GTP | GTPase IMAP family member 2 | / | 0.733 | |
| 3lbi | GNP | GTPase HRas | / | 0.733 | |
| 2jj1 | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.732 | |
| 4cei | ANP | ATP-dependent helicase/deoxyribonuclease subunit B | 3.1 | 0.732 | |
| 4dxa | GSP | Ras-related protein Rap-1b | / | 0.732 | |
| 4pan | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.732 | |
| 1ank | ANP | Adenylate kinase | / | 0.731 | |
| 1k5d | GNP | GTP-binding nuclear protein Ran | / | 0.731 | |
| 2j0v | GDP | Rac-like GTP-binding protein ARAC7 | / | 0.731 | |
| 4ag5 | ADP | Type IV secretory pathway VirB4 components-like protein | / | 0.731 | |
| 4tl8 | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.731 | |
| 4tl9 | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.730 | |
| 5k5z | ANP | Uncharacterized protein | / | 0.730 | |
| 1mmg | AGS | Myosin-2 heavy chain | / | 0.729 | |
| 3bos | CDP | Regulatory inactivation of DnaA Hda protein | / | 0.729 | |
| 4l8g | GDP | GTPase KRas | / | 0.729 | |
| 4tld | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.729 | |
| 1e96 | GTP | Ras-related C3 botulinum toxin substrate 1 | / | 0.728 | |
| 1mma | ADP | Myosin-2 heavy chain | / | 0.727 | |
| 4ap0 | ADP | Kinesin-like protein KIF11 | / | 0.727 | |
| 4tla | ADP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.727 | |
| 3sbd | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.725 | |
| 4xoi | GTP | Transforming protein RhoA | / | 0.725 | |
| 4js0 | GNP | Cell division control protein 42 homolog | / | 0.724 | |
| 1g17 | GNP | Ras-related protein SEC4 | / | 0.723 | |
| 3ddc | GNP | GTPase HRas | / | 0.723 | |
| 1m7b | GTP | Rho-related GTP-binding protein RhoE | / | 0.722 | |
| 2jj2 | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.722 | |
| 4cid | ANP | EH domain-containing protein 2 | / | 0.722 | |
| 4epx | GDP | GTPase KRas | / | 0.722 | |
| 1ytm | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.721 | |
| 2y65 | ADP | Kinesin heavy chain | / | 0.720 | |
| 3ref | GDP | Rho family GTPase | / | 0.720 | |
| 3zfd | ANP | Chromosome-associated kinesin KIF4 | / | 0.720 | |
| 4jky | ADP | Adenylate kinase | / | 0.720 | |
| 1zbd | GTP | Ras-related protein Rab-3A | / | 0.719 | |
| 2gvd | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.719 | |
| 1lfd | GNP | GTPase HRas | / | 0.718 | |
| 3tkl | GTP | Ras-related protein Rab-1A | / | 0.718 | |
| 4c0b | ATP | mRNA cleavage and polyadenylation factor CLP1 | / | 0.718 | |
| 4dlw | GNP | GTPase HRas | / | 0.718 | |
| 4jl6 | ADP | Adenylate kinase | / | 0.718 | |
| 4l9s | GDP | GTPase HRas | / | 0.718 | |
| 4tlc | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.718 | |
| 4z54 | GDP | Neuronal-specific septin-3 | / | 0.718 | |
| 4dso | GSP | GTPase KRas | / | 0.717 | |
| 5bn3 | ADP | V-type ATP synthase alpha chain | / | 0.717 | |
| 5bn3 | ADP | NEQ263 | / | 0.717 | |
| 1aq2 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.716 | |
| 1t91 | GTP | Ras-related protein Rab-7a | / | 0.715 | |
| 2fna | ADP | Uncharacterized protein | / | 0.715 | |
| 3zia | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.715 | |
| 1dj3 | GDP | Adenylosuccinate synthetase, chloroplastic | / | 0.714 | |
| 2py7 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.714 | |
| 3fkq | ATP | NtrC-like two-domain protein | / | 0.714 | |
| 1svw | GTP | Probable GTP-binding protein EngB | / | 0.712 | |
| 4uj5 | GNP | Ras-related protein Rab-11A | / | 0.712 | |
| 1wa5 | GTP | GTP-binding nuclear protein Ran | / | 0.710 | |
| 2q9c | GNP | Signal recognition particle receptor FtsY | / | 0.710 | |
| 1cxz | GSP | Transforming protein RhoA | / | 0.709 | |
| 1w5t | ADP | ORC1-type DNA replication protein 2 | / | 0.709 | |
| 2hld | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.709 | |
| 2hld | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.709 | |
| 4bzq | ADP | Bifunctional enzyme CysN/CysC | 2.7.1.25 | 0.709 | |
| 4qbi | AP5 | Adenylate kinase | / | 0.709 | |
| 1gwn | GTP | Rho-related GTP-binding protein RhoE | / | 0.708 | |
| 1h8h | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.707 | |
| 1h8h | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.707 | |
| 4db1 | ANP | Myosin-7 | / | 0.707 | |
| 4dsu | GDP | GTPase KRas | / | 0.706 | |
| 1p3d | ANP | UDP-N-acetylmuramate--L-alanine ligase | 6.3.2.8 | 0.705 | |
| 1z0a | GDP | Ras-related protein Rab-2A | / | 0.705 | |
| 1a2b | GSP | Transforming protein RhoA | / | 0.704 | |
| 2p2l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.704 | |
| 3vx4 | ATP | Putative ABC transporter, ATP-binding protein ComA | / | 0.704 | |
| 4uj3 | GNP | Ras-related protein Rab-11A | / | 0.704 | |
| 4ys0 | ADP | Protein translocase subunit SecA | / | 0.704 | |
| 1oyy | AGS | ATP-dependent DNA helicase RecQ | 3.6.4.12 | 0.703 | |
| 1xts | GTP | GTP-binding protein Rheb | / | 0.703 | |
| 1got | GDP | Guanine nucleotide-binding protein G(t) subunit alpha-1 | / | 0.702 | |
| 4lv6 | GDP | GTPase KRas | / | 0.702 | |
| 1ake | AP5 | Adenylate kinase | / | 0.701 | |
| 2fe4 | GDP | Ras-related protein Rab-6B | / | 0.701 | |
| 3sqx | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.701 | |
| 2ce2 | GDP | GTPase HRas | / | 0.700 | |
| 2dwp | ACP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 | 2.7.1.105 | 0.700 | |
| 2w2x | GSP | Ras-related C3 botulinum toxin substrate 2 | / | 0.700 | |
| 4q02 | GDP | GTPase KRas | / | 0.700 | |
| 5ftc | ADP | TPR domain protein | / | 0.700 | |
| 1fmw | ATP | Myosin-2 heavy chain | / | 0.698 | |
| 4ol0 | GTP | GTP-binding nuclear protein Ran | / | 0.698 | |
| 1f5n | GNP | Guanylate-binding protein 1 | / | 0.697 | |
| 1zc4 | GNP | Ras-related protein Ral-A | / | 0.697 | |
| 2jj1 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.697 | |
| 2jj1 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.697 | |
| 3wyg | GTP | GTP-binding nuclear protein GSP1/CNR1 | / | 0.697 | |
| 1khb | GCP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.696 | |
| 4cym | GCP | Ras-related protein Rab-32 | / | 0.696 | |
| 1e79 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.695 | |
| 1e79 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.695 | |
| 2v7q | ATP | ATP synthase subunit alpha, mitochondrial | / | 0.695 | |
| 2v7q | ATP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.695 | |
| 1tu3 | GNP | Ras-related protein Rab-5A | / | 0.694 | |
| 4lja | ACP | Chaperone protein ClpB | / | 0.694 | |
| 4gzl | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.693 | |
| 3qi2 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.692 | |
| 3v4f | GNP | GTPase HRas | / | 0.692 | |
| 2dpx | GDP | GTP-binding protein RAD | / | 0.691 | |
| 3cob | ADP | Kinesin heavy chain-like protein | / | 0.691 | |
| 5b2z | GNP | GTPase HRas | / | 0.691 | |
| 4hdq | GNP | Ras-related protein Rap-1b | / | 0.689 | |
| 2g0n | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.688 | |
| 1z0d | GDP | Ras-related protein Rab-5C | / | 0.687 | |
| 4tle | AGS | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.687 | |
| 3sqw | ANP | ATP-dependent RNA helicase MSS116, mitochondrial | 3.6.4.13 | 0.686 | |
| 1p9w | ANP | Type II secretion system protein E | / | 0.685 | |
| 3r9x | GNP | GTPase Era | / | 0.685 | |
| 2fju | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.684 | |
| 2jiz | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.684 | |
| 4c30 | ANP | DNA helicase | / | 0.684 | |
| 1rrg | GDP | ADP-ribosylation factor 1 | / | 0.683 | |
| 2ic5 | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.683 | |
| 3hpr | AP5 | Adenylate kinase | / | 0.683 | |
| 4bzc | T8T | Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 | 3.1.5 | 0.683 | |
| 3eg5 | GNP | Cell division control protein 42 homolog | / | 0.682 | |
| 4fu0 | ADP | D-alanine--D-alanine ligase | / | 0.682 | |
| 1v8k | ANP | Kinesin-like protein KIF2C | / | 0.681 | |
| 4jlo | ADP | Adenylate kinase | / | 0.681 | |
| 2jj2 | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.680 | |
| 2jj2 | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.680 | |
| 3c15 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.680 | |
| 3fvq | ATP | Fe(3+) ions import ATP-binding protein FbpC | / | 0.680 | |
| 4kvg | GTP | Ras-related protein Rap-1A | / | 0.680 | |
| 4ql3 | GDP | GTPase KRas | / | 0.680 | |
| 1g16 | GDP | Ras-related protein SEC4 | / | 0.679 | |
| 1wdt | GTP | Elongation factor G (EF-G-2) | / | 0.679 | |
| 2db3 | ANP | ATP-dependent RNA helicase vasa, isoform A | 3.6.4.13 | 0.679 | |
| 2r9v | ATP | ATP synthase subunit alpha | / | 0.679 | |
| 3c14 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.678 | |
| 4qnr | ATP | Psp operon transcriptional activator | / | 0.678 | |
| 4yqf | GDP | Septin-9 | / | 0.678 | |
| 1bmf | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.677 | |
| 1bmf | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.677 | |
| 2ywv | ADP | Phosphoribosylaminoimidazole-succinocarboxamide synthase | / | 0.677 | |
| 3a6p | GTP | GTP-binding nuclear protein Ran | / | 0.677 | |
| 4pjk | ADP | Myosin-2 heavy chain | / | 0.677 | |
| 3kz1 | GSP | Transforming protein RhoA | / | 0.676 | |
| 3zia | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.676 | |
| 4zir | ANP | Energy-coupling factor transporter ATP-binding protein EcfA2 | 3.6.3 | 0.676 | |
| 4zir | ANP | Energy-coupling factor transporter ATP-binding protein EcfA1 | / | 0.676 | |
| 1mf0 | GDP | Adenylosuccinate synthetase isozyme 1 | / | 0.675 | |
| 1ohh | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.675 | |
| 1ohh | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.675 | |
| 2qf2 | GDP | Phosphoenolpyruvate carboxykinase, cytosolic [GTP] | 4.1.1.32 | 0.675 | |
| 4pjj | ADP | Unconventional myosin-VI | / | 0.675 | |
| 3tjz | GNP | ADP-ribosylation factor 1 | / | 0.674 | |
| 4d81 | ADP | AAA ATPase, central domain protein | / | 0.674 | |
| 5i67 | GDP | Phosphoenolpyruvate carboxykinase [GTP] | / | 0.674 | |
| 2dft | ADP | Shikimate kinase | 2.7.1.71 | 0.673 | |
| 2eck | ADP | Adenylate kinase | / | 0.673 | |
| 3ews | ADP | ATP-dependent RNA helicase DDX19B | 3.6.4.13 | 0.673 | |
| 3hu2 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.673 | |
| 3oee | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.673 | |
| 3oee | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.673 | |
| 3qe0 | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.673 | |
| 3ums | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.673 | |
| 2bif | ANP | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 | 2.7.1.105 | 0.672 | |
| 3m0e | ATP | Transcriptional regulator (NtrC family) | / | 0.672 | |
| 3oes | GNP | GTPase RhebL1 | / | 0.672 | |
| 3oiu | GNP | GTPase HRas | / | 0.672 | |
| 1s1c | GNP | Transforming protein RhoA | / | 0.671 | |
| 2gm1 | ADP | Kinesin-like protein KIF11 | / | 0.671 | |
| 4tnr | DTP | Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 | 3.1.5 | 0.671 | |
| 1nsf | ATP | Vesicle-fusing ATPase | 3.6.4.6 | 0.670 | |
| 2a5y | ATP | Cell death protein 4 | / | 0.670 | |
| 1mez | GDP | Adenylosuccinate synthetase isozyme 1 | / | 0.669 | |
| 2zts | ADP | Uncharacterized protein | / | 0.669 | |
| 4hut | ATP | Cob(I)yrinic acid a,c-diamide adenosyltransferase | 2.5.1.17 | 0.669 | |
| 2c9o | ADP | RuvB-like 1 | 3.6.4.12 | 0.668 | |
| 4gzm | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.668 | |
| 4itr | GDP | Cell division control protein 42 homolog | / | 0.668 | |
| 4ki0 | ANP | Maltose/maltodextrin import ATP-binding protein MalK | / | 0.668 | |
| 1bif | AGS | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 | 2.7.1.105 | 0.667 | |
| 3dm5 | GDP | Signal recognition particle 54 kDa protein | / | 0.667 | |
| 3zvm | ADP | Bifunctional polynucleotide phosphatase/kinase | 2.7.1.78 | 0.667 | |
| 4qos | ADP | Psp operon transcriptional activator | / | 0.667 | |
| 4ohw | ATP | Protein clpf-1 | / | 0.666 | |
| 2l0x | GDP | GTP-binding protein Rheb | / | 0.665 | |
| 2c5l | GTP | GTPase HRas | / | 0.662 | |
| 2olr | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.661 | |
| 2ql6 | ADP | Nicotinamide riboside kinase 1 | / | 0.661 | |
| 3hu3 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.661 | |
| 4ko8 | AGS | Transitional endoplasmic reticulum ATPase | 3.6.4.6 | 0.661 | |
| 4pfp | ADP | Unconventional myosin-VI | / | 0.661 | |
| 1os1 | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.659 | |
| 1sxj | AGS | Replication factor C subunit 1 | / | 0.659 | |
| 1am4 | GNP | Cell division control protein 42 homolog | / | 0.658 | |
| 1e1q | ANP | ATP synthase subunit alpha, mitochondrial | / | 0.658 | |
| 1e1q | ANP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.658 | |
| 4ajp | 88N | L-lactate dehydrogenase A chain | 1.1.1.27 | 0.658 | |
| 4fid | GDP | G protein alpha subunit, putative | / | 0.658 | |
| 4d0l | GSP | Ras-related protein Rab-11A | / | 0.657 | |
| 4ej7 | ATP | Aminoglycoside 3'-phosphotransferase AphA1-IAB | / | 0.656 | |
| 1b7t | ADP | Myosin heavy chain, striated muscle | / | 0.655 | |
| 3ea0 | ATP | ATPase, ParA family | / | 0.655 | |
| 3pcr | GTP | ADP-ribosylation factor 6 | / | 0.655 | |
| 1sq5 | ADP | Pantothenate kinase | 2.7.1.33 | 0.654 | |
| 1d5c | GDP | GTPase (Rab6) | / | 0.653 | |
| 1nly | AGS | Cag alpha | / | 0.653 | |
| 4c2u | ANP | DNA helicase | / | 0.653 | |
| 1h8h | ADP | ATP synthase subunit alpha, mitochondrial | / | 0.652 | |
| 1h8h | ADP | ATP synthase subunit beta, mitochondrial | 3.6.3.14 | 0.652 | |
| 1xkv | ATP | Phosphoenolpyruvate carboxykinase (ATP) | / | 0.652 | |
| 3cx8 | GSP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.652 | |
| 4mit | GTP | Rho-related protein racC | / | 0.652 | |
| 3bbp | GTP | Ras-related protein Rab-6A | / | 0.651 | |
| 3ez3 | ZOL | Farnesyl pyrophosphate synthase, putative | / | 0.651 | |
| 4cvl | ACP | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase | / | 0.651 | |
| 4wa7 | GDP | GTPase KRas | / | 0.651 | |
| 2xto | GDP | GTPase IMAP family member 2 | / | 0.650 | |
| 3tm0 | ANP | Aminoglycoside 3'-phosphotransferase | 2.7.1.95 | 0.650 | |
| 4oi2 | ADP | Protein clpf-1 | / | 0.650 | |
| 4yag | NAI | C alpha-dehydrogenase | / | 0.650 |