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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1pwmFIDAldose reductase1.1.1.21

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
1pwmFIDAldose reductase1.1.1.211.000
2pdyFIDAldose reductase1.1.1.210.785
2pdwFIDAldose reductase1.1.1.210.771
2is72CLAldose reductase1.1.1.210.690
1ef3FIDAldose reductase1.1.1.210.643
3s3gTLTAldose reductase1.1.1.210.619
3u2cSUZAldose reductase1.1.1.210.614
4gabFIDAldo-keto reductase family 1 member B101.1.10.612
2f2kTGGAldose reductase1.1.1.210.610
2pd9FIDAldose reductase1.1.1.210.607
2inzOHPAldose reductase1.1.1.210.604
2nvcITAAldose reductase1.1.1.210.581
2pdkSBIAldose reductase1.1.1.210.575
2pdmZSTAldose reductase1.1.1.210.571
3p2vDOYAldose reductase1.1.1.210.570
1ekoI84Aldose reductase1.1.1.210.563
1ah0SBIAldose reductase1.1.1.210.560
3v35NTIAldose reductase1.1.1.210.555
1el3I84Aldose reductase1.1.1.210.539
2hvoZSTAldose reductase1.1.1.210.530
5liu388Aldo-keto reductase family 1 member B101.1.10.525
2agtFIDAldose reductase1.1.1.210.524
2pdfZSTAldose reductase1.1.1.210.524
2pdj393Aldose reductase1.1.1.210.524
1az1ALRAldose reductase1.1.1.210.513
2duzZSTAldose reductase1.1.1.210.512
2hvnZSTAldose reductase1.1.1.210.505
1uhoVDNcGMP-specific 3',5'-cyclic phosphodiesterase/0.504
4g2wNI0cGMP-specific 3',5'-cyclic phosphodiesterase/0.504
2f3815MAldo-keto reductase family 1 member C3/0.496
2ikj393Aldose reductase1.1.1.210.494
3bv7NAP3-oxo-5-beta-steroid 4-dehydrogenase/0.494
2pdu393Aldose reductase1.1.1.210.493
1oynROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.490
1ry0PG2Aldo-keto reductase family 1 member C3/0.490
2i16LDTAldose reductase1.1.1.210.487
4kfjFOLDihydrofolate reductase1.5.1.30.487
4dbuBT9Aldo-keto reductase family 1 member C3/0.486
1s3uTQDDihydrofolate reductase1.5.1.30.485
4a959MTGlycylpeptide N-tetradecanoyltransferase/0.483
1mvtDTMDihydrofolate reductase1.5.1.30.482
1us0LDTAldose reductase1.1.1.210.480
2dhfDZFDihydrofolate reductase1.5.1.30.479
1hfrMOTDihydrofolate reductase1.5.1.30.478
3h4gFIDAlcohol dehydrogenase [NADP(+)]1.1.1.20.478
2yneYNEGlycylpeptide N-tetradecanoyltransferase/0.477
3u5ySCGRaucaffricine-O-beta-D-glucosidase3.2.1.1250.477
4bbhYBNGlycylpeptide N-tetradecanoyltransferase/0.477
2pdh47DAldose reductase1.1.1.210.476
4b117I1Glycylpeptide N-tetradecanoyltransferase/0.475
2jl1NAPTriphenylmethane reductase/0.474
1e1fPSG4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1, chloroplastic3.2.1.1820.473
1ry8RUTAldo-keto reductase family 1 member C3/0.472
1xorZARcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.472
4b13X25Glycylpeptide N-tetradecanoyltransferase/0.472
4b144XBGlycylpeptide N-tetradecanoyltransferase/0.472
4wevSUZAldo-keto reductase family 1 member B101.1.10.472
2bjsACVIsopenicillin N synthase1.21.3.10.471
2hzqSTRApolipoprotein D/0.471
4g2yNI5cGMP-specific 3',5'-cyclic phosphodiesterase/0.471
4gv4MEJPoly [ADP-ribose] polymerase 32.4.2.300.471
1rxjBNIStreptavidin/0.470
3g5eQ74Aldose reductase1.1.1.210.470
4m6kFOLDihydrofolate reductase1.5.1.30.470
1u70MTXDihydrofolate reductase1.5.1.30.469
2c9zQUEAnthocyanidin 3-O-glucosyltransferase 22.4.1.1150.469
3wavDWVEctonucleotide pyrophosphatase/phosphodiesterase family member 23.1.4.390.468
4oex5EOcGMP-specific 3',5'-cyclic phosphodiesterase/0.468
4fam0SZAldo-keto reductase family 1 member C3/0.467
2w3mFOLDihydrofolate reductase1.5.1.30.466
3ugrIMNAldo-keto reductase family 1 member C3/0.466
4dbw511Aldo-keto reductase family 1 member C3/0.466
1ohjCOPDihydrofolate reductase1.5.1.30.465
1sg0STLRibosyldihydronicotinamide dehydrogenase [quinone]/0.465
3u57DH8Raucaffricine-O-beta-D-glucosidase3.2.1.1250.465
4kebFOLDihydrofolate reductase1.5.1.30.465
1qjfACSIsopenicillin N synthase1.21.3.10.464
3ld5LDTAldose reductase1.1.1.210.464
3v94WYQPhosphodiesterase/0.464
4wo5324Serine/threonine-protein kinase B-raf2.7.11.10.464
1isgAGSADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 23.2.2.60.463
3r8hZOMAldo-keto reductase family 1 member C3/0.463
4oew5IOcGMP-specific 3',5'-cyclic phosphodiesterase/0.463
1ejbINJ6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.462
1ut6A8NAcetylcholinesterase3.1.1.70.462
1xomCIOcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.461
4i9z5BAcGMP-specific 3',5'-cyclic phosphodiesterase/0.461
5agkH4BNitric oxide synthase, brain1.14.13.390.461
1kmsLIHDihydrofolate reductase1.5.1.30.460
2h447CAcGMP-specific 3',5'-cyclic phosphodiesterase/0.460
2ipw2CLAldose reductase1.1.1.210.460
3g4gD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.460
1dlrMXADihydrofolate reductase1.5.1.30.459
1hb1OCVIsopenicillin N synthase1.21.3.10.459
1pqc444Oxysterols receptor LXR-beta/0.459
1zgbA1EAcetylcholinesterase3.1.1.70.459
1zq5E04Aldo-keto reductase family 1 member C3/0.459
2h42VIAcGMP-specific 3',5'-cyclic phosphodiesterase/0.459
2qw8NAPEugenol synthase 11.1.1.3180.459
3g4kROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.459
3zkyWT4Isopenicillin N synthase1.21.3.10.459
2jb4A14Isopenicillin N synthase1.21.3.10.458
2ouyCMPcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.458
2vi5Y196,7-dimethyl-8-ribityllumazine synthase2.5.1.780.458
3sl6JN8cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.458
3k4551PDihydrofolate reductase1.5.1.30.457
3nubUD0UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase2.6.1.980.457
3o73O73Ribosyldihydronicotinamide dehydrogenase [quinone]/0.457
4n3l2FNProthrombin3.4.21.50.457
1d3dBZTProthrombin3.4.21.50.456
1hb3SCVIsopenicillin N synthase1.21.3.10.456
1oc1ASVIsopenicillin N synthase1.21.3.10.456
1sjwNGVNogalonic acid methyl ester cyclase/0.456
1z3n3NAAldose reductase1.1.1.210.455
3w5eNVWcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.455
2fm5M99cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.454
2pdp393Aldose reductase1.1.1.210.454
2vbdV10Isopenicillin N synthase1.21.3.10.454
3nxvD2FDihydrofolate reductase1.5.1.30.454
3uzwNAP3-oxo-5-beta-steroid 4-dehydrogenase/0.454
4hf415HcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.454
1efyBZCPoly [ADP-ribose] polymerase 12.4.2.300.453
1udtVIAcGMP-specific 3',5'-cyclic phosphodiesterase/0.453
3r6iJMSAldo-keto reductase family 1 member C3/0.453
4ia05BBcGMP-specific 3',5'-cyclic phosphodiesterase/0.453
4qjcIXEDihydrofolate reductase1.5.1.30.453
1ohkCOPDihydrofolate reductase1.5.1.30.452
1y2e5DEcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.452
1z4iUMP5'(3')-deoxyribonucleotidase, mitochondrial3.1.30.452
2g226IGRenin3.4.23.150.452
3d3p20AcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.452
4ajdF04cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.452
4nwiCTN7-methylguanosine phosphate-specific 5'-nucleotidase/0.452
1u65CP0Acetylcholinesterase3.1.1.70.451
2qo4CHDFatty acid-binding protein 10-A, liver basic/0.451
3n0hTOPDihydrofolate reductase1.5.1.30.451
3qm4PN0Cytochrome P450 2D6/0.451
3r8gIZPAldo-keto reductase family 1 member C3/0.451
4fcb0T7cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.451
4mvh2F5cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.451
1eveE20Acetylcholinesterase3.1.1.70.450
1obnASVIsopenicillin N synthase1.21.3.10.450
1pd9CO4Dihydrofolate reductase1.5.1.30.450
1pwlBFIAldose reductase1.1.1.210.450
1xonPILcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.450
3aivHBO4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase, chloroplastic3.2.1.1820.450
3r43ID8Aldo-keto reductase family 1 member C3/0.450
1kyxCRM6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.449
1pq944BOxysterols receptor LXR-beta/0.449
1z71L17Prothrombin3.4.21.50.449
2fzbTOLAldose reductase1.1.1.210.449
3nn6HNK6-hydroxy-L-nicotine oxidase/0.449
3wd9QPCcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.449
4dbs0HVAldo-keto reductase family 1 member C3/0.449
4llkMEWcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.449
1fvpFMANon-fluorescent flavoprotein/0.448
1upw444Oxysterols receptor LXR-beta/0.448
2wsa646Glycylpeptide N-tetradecanoyltransferase/0.448
2xi4AFTAcetylcholinesterase3.1.1.70.448
3g58988cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.448
3jt3H4BNitric oxide synthase, brain1.14.13.390.448
3sni546cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.448
4b12C23Glycylpeptide N-tetradecanoyltransferase/0.448
4gv08MEPoly [ADP-ribose] polymerase 32.4.2.300.448
4hhz15SPoly [ADP-ribose] polymerase 12.4.2.300.448
1re0AFBADP-ribosylation factor 1/0.447
1re0AFBARF guanine-nucleotide exchange factor 1/0.447
1s3vTQDDihydrofolate reductase1.5.1.30.447
1zgv501Prothrombin3.4.21.50.447
2ouu35GcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.447
2vdyHCYCorticosteroid-binding globulin/0.447
2xlpNAPPutative flavin-containing monooxygenase/0.447
3arvSAUChitinase A/0.447
3dy8IBMHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.447
3hmvHBTcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.447
3sl8JN7cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.447
3zj6VM2Raucaffricine-O-beta-D-glucosidase3.2.1.1250.447
4fcd0T6cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.447
4gv25MEPoly [ADP-ribose] polymerase 32.4.2.300.447
1drfFOLDihydrofolate reductase1.5.1.30.446
1s36CEIObelin/0.446
2ipiAKYAclacinomycin-N/aclacinomycin-A oxidase/0.446
2obxINI6,7-dimethyl-8-ribityllumazine synthase 22.5.1.780.446
2z3uCRRCytochrome P450/0.446
3ppkFNISerine/threonine-protein kinase B-raf2.7.11.10.446
3ziaADPATP synthase subunit beta, mitochondrial3.6.3.140.446
3zo7K6HMuconolactone Delta-isomerase/0.446
4pabTHGDimethylglycine dehydrogenase, mitochondrial1.5.8.40.446
1ro6ROLcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.445
2hv5ZSTAldose reductase1.1.1.210.445
2ohhFMNType A flavoprotein FprA10.445
2ovvPFHcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.445
2vbpVB1Isopenicillin N synthase1.21.3.10.445
2zu9GDPMannosyl-3-phosphoglycerate synthase2.4.1.2170.445
3f3y4OABile salt sulfotransferase2.8.2.140.445
3k4s0MOcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.445
3n3zIBMHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.445
4lsaBLDProtein BRASSINOSTEROID INSENSITIVE 12.7.10.10.445
4phlPILPhosphodiesterase/0.445
1d3pBT3Prothrombin3.4.21.50.444
2d06ESTSulfotransferase 1A12.8.2.10.444
3m64393Aldose reductase1.1.1.210.444
3ug8IMNAldo-keto reductase family 1 member C3/0.444
3uweVJJAldo-keto reductase family 1 member C3/0.444
3zoiM2WIsopenicillin N synthase1.21.3.10.444
4bubADPUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligase/0.444
1kyvRBF6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.443
1pkfEPDEpothilone C/D epoxidase1.140.443
1xoqROFcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.443
1z6tADPApoptotic protease-activating factor 1/0.443
3zj7C1KStrictosidine-O-beta-D-glucosidase3.2.1.1050.443
4l341VGTankyrase-22.4.2.300.443
4muw2F4cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.443
4stdBFSScytalone dehydratase4.2.1.940.443
1blzACVIsopenicillin N synthase1.21.3.10.442
1digL37C-1-tetrahydrofolate synthase, cytoplasmic1.5.1.50.442
1p0pBCHCholinesterase3.1.1.80.442
1s2cFLFAldo-keto reductase family 1 member C3/0.442
1s9dAFBCytohesin-2/0.442
1s9dAFBADP-ribosylation factor 1/0.442
2b8jADNClass B acid phosphatase3.1.3.20.442
2fb8215Serine/threonine-protein kinase B-raf2.7.11.10.442
3csoXNIGenome polyprotein2.7.7.480.442
3g4iD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.442
3tvxPNXcAMP-specific 3',5'-cyclic phosphodiesterase 4A3.1.4.530.442
3wi2P98cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.442
4gvsF4MMethenyltetrahydromethanopterin cyclohydrolase3.5.4.270.442
1jumBERHTH-type transcriptional regulator QacR/0.441
1nquRDL6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.441
2dv0ZSTAldose reductase1.1.1.210.441
2pb1NFGGlucan 1,3-beta-glucosidase/0.441
2wo7ASVIsopenicillin N synthase1.21.3.10.441
2y0jAXCcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.441
2yg3FADPutrescine oxidase/0.441
3c72CX1Geranylgeranyl transferase type-2 subunit beta2.5.1.600.441
3uzzTES3-oxo-5-beta-steroid 4-dehydrogenase/0.441
4hmn16JAldo-keto reductase family 1 member C3/0.441
4j7hTRHPCZA361.3/0.441
4nqgCZHMitrocomin/0.441
1n9mBTNStreptavidin/0.440
1tbbROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.440
1uwhBAXSerine/threonine-protein kinase B-raf2.7.11.10.440
1w19T1P6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.440
2c94TSF6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.440
2jgsBTNAvidin/0.440
2pdlTOLAldose reductase1.1.1.210.440
2xltNA0Putative flavin-containing monooxygenase/0.440
3dysIBMHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.440
3g1rFIT3-oxo-5-beta-steroid 4-dehydrogenase/0.440
3nhlYTRRibosyldihydronicotinamide dehydrogenase [quinone]/0.440
4b65NDPL-ornithine N(5)-monooxygenase/0.440
4qohSTLRibosyldihydronicotinamide dehydrogenase [quinone]/0.440