1.850 Å
X-ray
2009-04-20
Name: | Alcohol dehydrogenase [NADP(+)] |
---|---|
ID: | AK1A1_PIG |
AC: | P50578 |
Organism: | Sus scrofa |
Reign: | Eukaryota |
TaxID: | 9823 |
EC Number: | 1.1.1.2 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 15.571 |
---|---|
Number of residues: | 27 |
Including | |
Standard Amino Acids: | 25 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 1 |
Cofactors: | NAP |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.228 | 334.125 |
% Hydrophobic | % Polar |
---|---|
58.59 | 41.41 |
According to VolSite |
HET Code: | FID |
---|---|
Formula: | C12H10FN3O4 |
Molecular weight: | 279.224 g/mol |
DrugBank ID: | DB02021 |
Buried Surface Area: | 70.5 % |
Polar Surface area: | 110.52 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 1 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 1 |
X | Y | Z |
---|---|---|
1.9015 | -27.9593 | -4.4147 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C8I | CH2 | TRP- 22 | 3.94 | 0 | Hydrophobic |
C13 | CG2 | ILE- 49 | 4.25 | 0 | Hydrophobic |
F17 | CG1 | ILE- 49 | 3.74 | 0 | Hydrophobic |
F17 | CD1 | TYR- 50 | 3.93 | 0 | Hydrophobic |
N4 | NE2 | HIS- 113 | 2.78 | 148.69 | H-Bond (Ligand Donor) |
C9 | CZ2 | TRP- 114 | 4.26 | 0 | Hydrophobic |
O6I | NE1 | TRP- 114 | 2.87 | 158.74 | H-Bond (Protein Donor) |
C8I | CG2 | ILE- 299 | 3.63 | 0 | Hydrophobic |
C8I | C4N | NAP- 2350 | 4.35 | 0 | Hydrophobic |