1.850 Å
X-ray
2009-04-20
| Name: | Alcohol dehydrogenase [NADP(+)] |
|---|---|
| ID: | AK1A1_PIG |
| AC: | P50578 |
| Organism: | Sus scrofa |
| Reign: | Eukaryota |
| TaxID: | 9823 |
| EC Number: | 1.1.1.2 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 15.571 |
|---|---|
| Number of residues: | 27 |
| Including | |
| Standard Amino Acids: | 25 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 1 |
| Cofactors: | NAP |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.228 | 334.125 |
| % Hydrophobic | % Polar |
|---|---|
| 58.59 | 41.41 |
| According to VolSite | |

| HET Code: | FID |
|---|---|
| Formula: | C12H10FN3O4 |
| Molecular weight: | 279.224 g/mol |
| DrugBank ID: | DB02021 |
| Buried Surface Area: | 70.5 % |
| Polar Surface area: | 110.52 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 4 |
| H-Bond Donors: | 3 |
| Rings: | 3 |
| Aromatic rings: | 1 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 1 |
| X | Y | Z |
|---|---|---|
| 1.9015 | -27.9593 | -4.4147 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C8I | CH2 | TRP- 22 | 3.94 | 0 | Hydrophobic |
| C13 | CG2 | ILE- 49 | 4.25 | 0 | Hydrophobic |
| F17 | CG1 | ILE- 49 | 3.74 | 0 | Hydrophobic |
| F17 | CD1 | TYR- 50 | 3.93 | 0 | Hydrophobic |
| N4 | NE2 | HIS- 113 | 2.78 | 148.69 | H-Bond (Ligand Donor) |
| C9 | CZ2 | TRP- 114 | 4.26 | 0 | Hydrophobic |
| O6I | NE1 | TRP- 114 | 2.87 | 158.74 | H-Bond (Protein Donor) |
| C8I | CG2 | ILE- 299 | 3.63 | 0 | Hydrophobic |
| C8I | C4N | NAP- 2350 | 4.35 | 0 | Hydrophobic |