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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3qtxX43Cyclin-dependent kinase 22.7.11.22

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3qtxX43Cyclin-dependent kinase 22.7.11.221.000
2xmyCDKCyclin-dependent kinase 22.7.11.220.634
3rak03ZCyclin-dependent kinase 22.7.11.220.629
3rpv26ZCyclin-dependent kinase 22.7.11.220.624
3ral04ZCyclin-dependent kinase 22.7.11.220.619
3s1h56ZCyclin-dependent kinase 22.7.11.220.615
4ez30S0Cyclin-dependent kinase 22.7.11.220.610
3qxpX64Cyclin-dependent kinase 22.7.11.220.608
3rm719ZCyclin-dependent kinase 22.7.11.220.608
3qtqX35Cyclin-dependent kinase 22.7.11.220.605
3rmf20ZCyclin-dependent kinase 22.7.11.220.599
2w06FRVCyclin-dependent kinase 22.7.11.220.595
3r9dX6BCyclin-dependent kinase 22.7.11.220.594
4fko20KCyclin-dependent kinase 22.7.11.220.592
3r9hZ67Cyclin-dependent kinase 22.7.11.220.589
3rk909ZCyclin-dependent kinase 22.7.11.220.589
4fkv61KCyclin-dependent kinase 22.7.11.220.589
3qtuX44Cyclin-dependent kinase 22.7.11.220.587
4acm7YGCyclin-dependent kinase 22.7.11.220.585
4fkw62KCyclin-dependent kinase 22.7.11.220.585
2c6iDT1Cyclin-dependent kinase 22.7.11.220.579
3rni21ZCyclin-dependent kinase 22.7.11.220.574
3sw418KCyclin-dependent kinase 22.7.11.220.572
3rk708ZCyclin-dependent kinase 22.7.11.220.570
1ke6LS2Cyclin-dependent kinase 22.7.11.220.569
2w05FRTCyclin-dependent kinase 22.7.11.220.569
1ke5LS1Cyclin-dependent kinase 22.7.11.220.568
3sqq99ZCyclin-dependent kinase 22.7.11.220.564
2r3lSCWCyclin-dependent kinase 22.7.11.220.563
1ke7LS3Cyclin-dependent kinase 22.7.11.220.561
2fvdLIACyclin-dependent kinase 22.7.11.220.559
3unj0BXCyclin-dependent kinase 22.7.11.220.558
1di8DTQCyclin-dependent kinase 22.7.11.220.556
3ezvEZVCyclin-dependent kinase 22.7.11.220.555
4ek816KCyclin-dependent kinase 22.7.11.220.555
1gih1PUCyclin-dependent kinase 22.7.11.220.554
1p2a5BNCyclin-dependent kinase 22.7.11.220.554
3unk0BYCyclin-dependent kinase 22.7.11.220.550
3py0SU9Cyclin-dependent kinase 22.7.11.220.549
1urwI1PCyclin-dependent kinase 22.7.11.220.547
1y91CT9Cyclin-dependent kinase 22.7.11.220.547
3qtzX42Cyclin-dependent kinase 22.7.11.220.547
3sw719KCyclin-dependent kinase 22.7.11.220.547
3qxoX65Cyclin-dependent kinase 22.7.11.220.546
1ke8LS4Cyclin-dependent kinase 22.7.11.220.545
2vtjLZ4Cyclin-dependent kinase 22.7.11.220.544
4fkq42KCyclin-dependent kinase 22.7.11.220.543
1oitHDTCyclin-dependent kinase 22.7.11.220.542
4bgh3I6Cyclin-dependent kinase 22.7.11.220.542
3qu0X40Cyclin-dependent kinase 22.7.11.220.541
3r7vZ02Cyclin-dependent kinase 22.7.11.220.541
3r6xX84Cyclin-dependent kinase 22.7.11.220.540
1pxmCK5Cyclin-dependent kinase 22.7.11.220.539
1y8yCT7Cyclin-dependent kinase 22.7.11.220.539
2btsU32Cyclin-dependent kinase 22.7.11.220.539
4fkr45KCyclin-dependent kinase 22.7.11.220.538
1ykr628Cyclin-dependent kinase 22.7.11.220.537
2vtiLZ3Cyclin-dependent kinase 22.7.11.220.534
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.533
3raiX85Cyclin-dependent kinase 22.7.11.220.533
3rk507ZCyclin-dependent kinase 22.7.11.220.533
3r73X87Cyclin-dependent kinase 22.7.11.220.532
2c6o4SPCyclin-dependent kinase 22.7.11.220.530
2w17I19Cyclin-dependent kinase 22.7.11.220.529
3qzgX67Cyclin-dependent kinase 22.7.11.220.529
2iw84SPCyclin-dependent kinase 22.7.11.220.528
3qtrX36Cyclin-dependent kinase 22.7.11.220.528
3r7yZ04Cyclin-dependent kinase 22.7.11.220.528
3rjc06ZCyclin-dependent kinase 22.7.11.220.528
2b52D42Cyclin-dependent kinase 22.7.11.220.525
2uznC96Cyclin-dependent kinase 22.7.11.220.524
3qqfX07Cyclin-dependent kinase 22.7.11.220.524
4fkt48KCyclin-dependent kinase 22.7.11.220.524
1g5sI17Cyclin-dependent kinase 22.7.11.220.523
1v1k3FPCyclin-dependent kinase 22.7.11.220.522
2w1hL0FCyclin-dependent kinase 22.7.11.220.522
2xnbY8LCyclin-dependent kinase 22.7.11.220.522
4fx360KCyclin-dependent kinase 22.7.11.220.522
2uzoC62Cyclin-dependent kinase 22.7.11.220.520
3r7uX96Cyclin-dependent kinase 22.7.11.220.520
2bhhRYUCyclin-dependent kinase 22.7.11.220.519
3r71X86Cyclin-dependent kinase 22.7.11.220.519
1oguST8Cyclin-dependent kinase 22.7.11.220.518
3qqkX02Cyclin-dependent kinase 22.7.11.220.518
2j9mPY8Cyclin-dependent kinase 22.7.11.220.517
3r1sX73Cyclin-dependent kinase 22.7.11.220.517
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.516
4fks46KCyclin-dependent kinase 22.7.11.220.516
2r3kSCQCyclin-dependent kinase 22.7.11.220.515
1ke9LS5Cyclin-dependent kinase 22.7.11.220.514
2btrU73Cyclin-dependent kinase 22.7.11.220.514
3qx2X63Cyclin-dependent kinase 22.7.11.220.514
1w0xOLOCyclin-dependent kinase 22.7.11.220.513
3qzhX69Cyclin-dependent kinase 22.7.11.220.512
4qmpDKISerine/threonine-protein kinase 242.7.11.10.512
3r28XA0Cyclin-dependent kinase 22.7.11.220.511
2r3iSCFCyclin-dependent kinase 22.7.11.220.510
3rkb12ZCyclin-dependent kinase 22.7.11.220.510
3uli1N3Cyclin-dependent kinase 22.7.11.220.510
4lyn1YGCyclin-dependent kinase 22.7.11.220.509
1h1r6CPCyclin-dependent kinase 22.7.11.220.508
2r3p3SCCyclin-dependent kinase 22.7.11.220.508
2vv9IM9Cyclin-dependent kinase 22.7.11.220.508
1oiyN41Cyclin-dependent kinase 22.7.11.220.507
3lfnA27Cyclin-dependent kinase 22.7.11.220.507
1fvt106Cyclin-dependent kinase 22.7.11.220.505
1fvv107Cyclin-dependent kinase 22.7.11.220.505
1h1s4SPCyclin-dependent kinase 22.7.11.220.504
2bheBRYCyclin-dependent kinase 22.7.11.220.504
3ti1B49Cyclin-dependent kinase 22.7.11.220.504
4erwSTUCyclin-dependent kinase 22.7.11.220.504
1pxkCK3Cyclin-dependent kinase 22.7.11.220.503
4ek610KCyclin-dependent kinase 22.7.11.220.503
1pyePM1Cyclin-dependent kinase 22.7.11.220.501
3qruX19Cyclin-dependent kinase 22.7.11.220.501
1oi9N20Cyclin-dependent kinase 22.7.11.220.500
2vtnLZ7Cyclin-dependent kinase 22.7.11.220.500
3ddqRRCCyclin-dependent kinase 22.7.11.220.500
3rpy27ZCyclin-dependent kinase 22.7.11.220.500
3qqhX0ACyclin-dependent kinase 22.7.11.220.499
3r7iX9ICyclin-dependent kinase 22.7.11.220.497
3s0o50ZCyclin-dependent kinase 22.7.11.220.497
4fkpLS5Cyclin-dependent kinase 22.7.11.220.497
2vttLZDCyclin-dependent kinase 22.7.11.220.496
3qwjX6ACyclin-dependent kinase 22.7.11.220.495
3rm618ZCyclin-dependent kinase 22.7.11.220.494
1dm2HMDCyclin-dependent kinase 22.7.11.220.493
2a0cCK9Cyclin-dependent kinase 22.7.11.220.492
3ezrEZRCyclin-dependent kinase 22.7.11.220.492
4kikKSAInhibitor of nuclear factor kappa-B kinase subunit beta2.7.11.100.492
3r8zZ63Cyclin-dependent kinase 22.7.11.220.491
2iw94SPCyclin-dependent kinase 22.7.11.220.490
3iggEFQCyclin-dependent kinase 22.7.11.220.490
2vtsLZCCyclin-dependent kinase 22.7.11.220.489
1w8cN69Cyclin-dependent kinase 22.7.11.220.488
3r8lZ30Cyclin-dependent kinase 22.7.11.220.488
3rpo24ZCyclin-dependent kinase 22.7.11.220.487
1oiqHDUCyclin-dependent kinase 22.7.11.220.486
2uzdC85Cyclin-dependent kinase 22.7.11.220.486
4eor4SPCyclin-dependent kinase 22.7.11.220.486
2c6lDT4Cyclin-dependent kinase 22.7.11.220.485
3ig7EFPCyclin-dependent kinase 22.7.11.220.485
1pxlCK4Cyclin-dependent kinase 22.7.11.220.484
2r3mSCXCyclin-dependent kinase 22.7.11.220.484
3lfqA28Cyclin-dependent kinase 22.7.11.220.484
1pkdUCNCyclin-dependent kinase 22.7.11.220.483
2vu3LZECyclin-dependent kinase 22.7.11.220.483
3wblPDYCyclin-dependent kinase 22.7.11.220.483
1aq1STUCyclin-dependent kinase 22.7.11.220.482
3pj8404Cyclin-dependent kinase 22.7.11.220.482
2wxvWXVCyclin-dependent kinase 22.7.11.220.481
3ql8X01Cyclin-dependent kinase 22.7.11.220.481
4kd11QKCyclin-dependent kinase 22.7.11.220.481
2b55D31Cyclin-dependent kinase 22.7.11.220.480
4eok4SPCyclin-dependent kinase 22.7.11.220.480
2c6tDT5Cyclin-dependent kinase 22.7.11.220.479
2r64740Cyclin-dependent kinase 22.7.11.220.479
2c69CT8Cyclin-dependent kinase 22.7.11.220.478
2r3jSCJCyclin-dependent kinase 22.7.11.220.478
1oiuN76Cyclin-dependent kinase 22.7.11.220.477
2r3gSC9Cyclin-dependent kinase 22.7.11.220.477
2uzlC94Cyclin-dependent kinase 22.7.11.220.477
2b54D05Cyclin-dependent kinase 22.7.11.220.476
1pxpCK8Cyclin-dependent kinase 22.7.11.220.475
2nrySTUInterleukin-1 receptor-associated kinase 42.7.11.10.475
3r1yX76Cyclin-dependent kinase 22.7.11.220.475
3r8vZ62Cyclin-dependent kinase 22.7.11.220.475
2c6mDT5Cyclin-dependent kinase 22.7.11.220.473
2r3r6SCCyclin-dependent kinase 22.7.11.220.473
2wihP48Cyclin-dependent kinase 22.7.11.220.473
3pxyJWSCyclin-dependent kinase 22.7.11.220.473
3qwkX62Cyclin-dependent kinase 22.7.11.220.473
4bcpT3CCyclin-dependent kinase 22.7.11.220.473
1oirHDYCyclin-dependent kinase 22.7.11.220.472
2r3o2SCCyclin-dependent kinase 22.7.11.220.472
2x1nX1NCyclin-dependent kinase 22.7.11.220.472
3s2pPMUCyclin-dependent kinase 22.7.11.220.472
3sheI85MAP kinase-activated protein kinase 32.7.11.10.471
3tiz3TICyclin-dependent kinase 22.7.11.220.471
3roy22ZCyclin-dependent kinase 22.7.11.220.470
3r1qX75Cyclin-dependent kinase 22.7.11.220.469
1gij2PUCyclin-dependent kinase 22.7.11.220.468
1ckpPVBCyclin-dependent kinase 22.7.11.220.467
3rahO1ZCyclin-dependent kinase 22.7.11.220.467
1vyzN5BCyclin-dependent kinase 22.7.11.220.466
2i40BLZCyclin-dependent kinase 22.7.11.220.466
2wpa889Cyclin-dependent kinase 22.7.11.220.466
3r9oZ71Cyclin-dependent kinase 22.7.11.220.466
2a4lRRCCyclin-dependent kinase 22.7.11.220.464
3ddpRC8Cyclin-dependent kinase 22.7.11.220.464
3qtwX3ACyclin-dependent kinase 22.7.11.220.464
3s00Z60Cyclin-dependent kinase 22.7.11.220.464
1e9hINRCyclin-dependent kinase 22.7.11.220.462
2eufLQQCyclin-dependent kinase 62.7.11.220.462
3o0g3O0Cyclin-dependent-like kinase 52.7.11.10.462
3qzfX66Cyclin-dependent kinase 22.7.11.220.462
3r7eX88Cyclin-dependent kinase 22.7.11.220.462
3le62BZCyclin-dependent kinase 22.7.11.220.461
4ft0HK9Serine/threonine-protein kinase Chk12.7.11.10.460
1h0w207Cyclin-dependent kinase 22.7.11.220.459
2r3fSC8Cyclin-dependent kinase 22.7.11.220.459
1r78FMDCyclin-dependent kinase 22.7.11.220.458
2pvnP63Casein kinase II subunit alpha2.7.11.10.458
2x8iX8ISerine/threonine-protein kinase Chk12.7.11.10.458
1gii1PUCyclin-dependent kinase 22.7.11.220.457
2c6kDT2Cyclin-dependent kinase 22.7.11.220.457
3fz1B98Cyclin-dependent kinase 22.7.11.220.457
3ggfGVDSerine/threonine-protein kinase 26/0.457
2vthLZ2Cyclin-dependent kinase 22.7.11.220.456
3qziX72Cyclin-dependent kinase 22.7.11.220.456
3r8uZ31Cyclin-dependent kinase 22.7.11.220.456
3rzb02ZCyclin-dependent kinase 22.7.11.220.455
3my5RFZCyclin-dependent kinase 22.7.11.220.454
4kioG5KTyrosine-protein kinase ITK/TSK2.7.10.20.454
2vtrLZBCyclin-dependent kinase 22.7.11.220.453
3amaSKEcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.453
3i4bZ48Glycogen synthase kinase-3 beta2.7.11.260.453
3v5l0G1Tyrosine-protein kinase ITK/TSK2.7.10.20.453
3r83Z14Cyclin-dependent kinase 22.7.11.220.452
3r8pZ46Cyclin-dependent kinase 22.7.11.220.452
2cchATPCyclin-dependent kinase 22.7.11.220.451
3be9P04Casein kinase II subunit alpha2.7.11.10.451
4fkg4CKCyclin-dependent kinase 22.7.11.220.451
2p83MR0Beta-secretase 13.4.23.460.449
3rpr25ZCyclin-dependent kinase 22.7.11.220.449
3qcx3Q23-phosphoinositide-dependent protein kinase 12.7.11.10.448
2r3q5SCCyclin-dependent kinase 22.7.11.220.447
3f69XDRSerine/threonine-protein kinase PknB2.7.11.10.447
3qrtX14Cyclin-dependent kinase 22.7.11.220.447
4fkj11KCyclin-dependent kinase 22.7.11.220.447
1hckATPCyclin-dependent kinase 22.7.11.220.446
3dogNNNCyclin-dependent kinase 22.7.11.220.446
1pxoCK7Cyclin-dependent kinase 22.7.11.220.445
1vyw292Cyclin-dependent kinase 22.7.11.220.445
3i5zZ48Mitogen-activated protein kinase 12.7.11.240.445
3r9nZ68Cyclin-dependent kinase 22.7.11.220.445
4fr4STUSerine/threonine-protein kinase 32A2.7.11.10.444
4ftt6HKSerine/threonine-protein kinase Chk12.7.11.10.444
2uzbC75Cyclin-dependent kinase 22.7.11.220.443
2uzeC95Cyclin-dependent kinase 22.7.11.220.443
3qqlX03Cyclin-dependent kinase 22.7.11.220.443
4u9aSTUInterleukin-1 receptor-associated kinase 42.7.11.10.443
2duv371Cyclin-dependent kinase 22.7.11.220.442
4bbfO19Tyrosine-protein kinase JAK2/0.442
5dqrFAD7-hydroxymethyl chlorophyll a reductase, chloroplastic1.17.7.20.442
2cf6NAPCinnamyl alcohol dehydrogenase 51.1.1.1950.441
2hog710Serine/threonine-protein kinase Chk12.7.11.10.441
2iw6QQ2Cyclin-dependent kinase 22.7.11.220.440