1.750 Å
X-ray
2010-08-18
Name: | cAMP-dependent protein kinase catalytic subunit alpha |
---|---|
ID: | KAPCA_HUMAN |
AC: | P17612 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.11.11 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 97 % |
B | 3 % |
B-Factor: | 24.389 |
---|---|
Number of residues: | 37 |
Including | |
Standard Amino Acids: | 34 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 3 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.079 | 955.125 |
% Hydrophobic | % Polar |
---|---|
43.82 | 56.18 |
According to VolSite |
HET Code: | SKE |
---|---|
Formula: | C15H12F2N6O3S |
Molecular weight: | 394.356 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 67.8 % |
Polar Surface area: | 154.36 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 7 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 4 |
X | Y | Z |
---|---|---|
-29.6464 | 9.81559 | 6.62241 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C3 | CD1 | LEU- 49 | 4.18 | 0 | Hydrophobic |
C5 | CB | LEU- 49 | 4.04 | 0 | Hydrophobic |
C7 | CD2 | LEU- 49 | 3.99 | 0 | Hydrophobic |
F1 | CB | LEU- 49 | 3.3 | 0 | Hydrophobic |
C10 | CG1 | VAL- 57 | 4.35 | 0 | Hydrophobic |
C12 | CB | VAL- 57 | 4.4 | 0 | Hydrophobic |
F1 | CG1 | VAL- 57 | 3.58 | 0 | Hydrophobic |
F1 | CB | ALA- 70 | 4.34 | 0 | Hydrophobic |
N1 | O | GLU- 121 | 2.79 | 159.87 | H-Bond (Ligand Donor) |
N2 | N | ALA- 123 | 3.04 | 173.73 | H-Bond (Protein Donor) |
N3 | O | ALA- 123 | 2.81 | 151.8 | H-Bond (Ligand Donor) |
C14 | CG | GLU- 127 | 4.04 | 0 | Hydrophobic |
F2 | CD2 | LEU- 173 | 3.46 | 0 | Hydrophobic |
N4 | O | HOH- 433 | 2.75 | 150.68 | H-Bond (Ligand Donor) |