Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3flyFLYMitogen-activated protein kinase 14

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity
Align
3flyFLYMitogen-activated protein kinase 14/1.000
3fmh533Mitogen-activated protein kinase 14/0.811
3flzFLZMitogen-activated protein kinase 14/0.785
3fi4FI4Mitogen-activated protein kinase 14/0.725
3fln3FNMitogen-activated protein kinase 14/0.707
3flwFLWMitogen-activated protein kinase 14/0.706
3fklFKLMitogen-activated protein kinase 14/0.676
3fmkFMKMitogen-activated protein kinase 14/0.652
3iphG11Mitogen-activated protein kinase 14/0.643
3fskRO6Mitogen-activated protein kinase 14/0.634
3hl7I47Mitogen-activated protein kinase 14/0.630
3nww3NWMitogen-activated protein kinase 14/0.615
3dt1P40Mitogen-activated protein kinase 14/0.609
3mpt1GKMitogen-activated protein kinase 14/0.599
2balPQAMitogen-activated protein kinase 14/0.594
4lopSB4Mitogen-activated protein kinase 14/0.585
3hvcGG5Mitogen-activated protein kinase 14/0.572
3flsFLSMitogen-activated protein kinase 14/0.565
4aa5NQBMitogen-activated protein kinase 14/0.564
4aa4QC0Mitogen-activated protein kinase 14/0.563
3hllI45Mitogen-activated protein kinase 14/0.562
2ghlLIBMitogen-activated protein kinase 14/0.558
4kip1R9Mitogen-activated protein kinase 14/0.557
3fmlFMLMitogen-activated protein kinase 14/0.556
3fmn530Mitogen-activated protein kinase 14/0.554
1ouk084Mitogen-activated protein kinase 14/0.549
4looSB4Mitogen-activated protein kinase 14/0.545
3s4qNK0Mitogen-activated protein kinase 14/0.543
4aacAAVMitogen-activated protein kinase 14/0.543
4loqSB4Mitogen-activated protein kinase 14/0.533
2qd9LGFMitogen-activated protein kinase 14/0.532
2rg6287Mitogen-activated protein kinase 14/0.532
3fl4FL4Mitogen-activated protein kinase 14/0.525
1zz2B11Mitogen-activated protein kinase 14/0.523
2rg5279Mitogen-activated protein kinase 14/0.520
4kin1M8Mitogen-activated protein kinase 14/0.517
1bl6SB6Mitogen-activated protein kinase 14/0.516
3u8w09JMitogen-activated protein kinase 14/0.516
3mvl38PMitogen-activated protein kinase 14/0.512
4kiq1RAMitogen-activated protein kinase 14/0.512
1ouy094Mitogen-activated protein kinase 14/0.511
3fkoFKOMitogen-activated protein kinase 14/0.510
3gfeP37Mitogen-activated protein kinase 14/0.509
3roc29AMitogen-activated protein kinase 14/0.508
1ywrLI9Mitogen-activated protein kinase 14/0.507
1zyjBI5Mitogen-activated protein kinase 14/0.502
3uibSB2Putative mitogen-activated protein kinase/0.497
3l8xN4DMitogen-activated protein kinase 14/0.494
3mpaSB2Mitogen-activated protein kinase 14/0.494
4eh70OOMitogen-activated protein kinase 14/0.494
3ocgOCGMitogen-activated protein kinase 14/0.492
5ar4SB2Receptor-interacting serine/threonine-protein kinase 22.7.11.10.491
2nrySTUInterleukin-1 receptor-associated kinase 42.7.11.10.489
3b8r887Vascular endothelial growth factor receptor 22.7.10.10.488
3gw9VNILanosterol 14-alpha-demethylase/0.488
4c3f7KWTyrosine-protein kinase Lck2.7.10.20.488
1m7qDQOMitogen-activated protein kinase 14/0.486
2hdhNADHydroxyacyl-coenzyme A dehydrogenase, mitochondrial1.1.1.350.483
3hp552PMitogen-activated protein kinase 14/0.482
4nka2K7Fibroblast growth factor receptor 1/0.480
2zb0GK3Mitogen-activated protein kinase 14/0.479
4eh60ONMitogen-activated protein kinase 14/0.479
1fwkADPHomoserine kinase2.7.1.390.476
2vynNADGlyceraldehyde-3-phosphate dehydrogenase A/0.476
2j5xGSPADP-ribosylation factor 6/0.474
4l4xNDPAmphI/0.473
4nk92K5Fibroblast growth factor receptor 1/0.473
1bdlIM1Gag-Pol polyprotein3.4.23.160.472
3fmjFMJMitogen-activated protein kinase 14/0.472
4g3jVNTLanosterol 14-alpha-demethylase/0.472
4mf029ZTyrosine-protein kinase ITK/TSK2.7.10.20.472
4ewqMWLMitogen-activated protein kinase 14/0.471
2xikJ60Serine/threonine-protein kinase 252.7.11.10.470
3atzFMNProstaglandin F2a synthase/0.470
3fmmXI2Mitogen-activated protein kinase 14/0.470
3mvm39PMitogen-activated protein kinase 14/0.469
2cf6NAPCinnamyl alcohol dehydrogenase 51.1.1.1950.468
2qboCAMCamphor 5-monooxygenase1.14.15.10.468
3t113T1Gag-Pol polyprotein3.4.23.160.468
4bdiHAUSerine/threonine-protein kinase Chk22.7.11.10.468
4cd2FOLDihydrofolate reductase1.5.1.30.468
1s0xC3SNuclear receptor ROR-alpha/0.467
2q9fC3SCholesterol 24-hydroxylase/0.467
3t2zFADSulfide-quinone reductase/0.467
3cjgKIMVascular endothelial growth factor receptor 22.7.10.10.466
3kf7L9GMitogen-activated protein kinase 14/0.466
1yw2PGJMitogen-activated protein kinase 14/0.465
3ha85JZMitogen-activated protein kinase 14/0.465
3hdhNADHydroxyacyl-coenzyme A dehydrogenase, mitochondrial1.1.1.350.465
4u97STUInterleukin-1 receptor-associated kinase 42.7.11.10.465
3b70NAPEnoyl reductase LovC10.464
3bv3P39Mitogen-activated protein kinase 14/0.464
3itzP66Mitogen-activated protein kinase 14/0.464
1f17NAIHydroxyacyl-coenzyme A dehydrogenase, mitochondrial1.1.1.350.463
4bf2STUMitogen-activated protein kinase kinase kinase 52.7.11.250.463
4eplJAIJasmonic acid-amido synthetase JAR16.3.20.463
4fw8NAI3-oxoacyl-(Acyl-carrier-protein) reductase/0.463
4nky3QZSteroid 17-alpha-hydroxylase/17,20 lyase/0.463
2xa4AZ5Tyrosine-protein kinase JAK2/0.462
1vikBAYGag-Pol polyprotein/0.461
1z1rHBHGag-Pol polyprotein3.4.23.160.461
2q5kAB1Protease/0.461
3mwuBK3Calmodulin-domain protein kinase 1, putative/0.461
4hhz15SPoly [ADP-ribose] polymerase 12.4.2.300.461
1k6cMK1Gag-Pol polyprotein3.4.23.160.460
1ywnLIFVascular endothelial growth factor receptor 22.7.10.10.460
2p3b3TLV-1 PROTEASE protein/0.460
2p3b3TLV-1 protease/0.460
3hx4ANPCalmodulin-domain protein kinase 1/0.460
3kpkFADSulfide-quinone reductase/0.460
3lshFADPyranose 2-oxidase/0.460
3p6pA6BCamphor 5-monooxygenase1.14.15.10.460
3sp6IL2Peroxisome proliferator-activated receptor alpha/0.460
4anqVGHALK tyrosine kinase receptor2.7.10.10.460
4g74FADRotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial1.6.5.90.460
4hdbG52Gag-Pol polyprotein3.4.23.160.460
1iolESTEstradiol 17-beta-dehydrogenase 11.1.1.620.459
1nvtNAPShikimate dehydrogenase (NADP(+))/0.459
2ftoCB3Thymidylate synthase/0.459
2gfsPQBMitogen-activated protein kinase 14/0.459
3cblSTUTyrosine-protein kinase Fes/Fps2.7.10.20.459
4fod0UVALK tyrosine kinase receptor2.7.10.10.459
3vid4TTVascular endothelial growth factor receptor 22.7.10.10.458
3v8w0G2Tyrosine-protein kinase ITK/TSK2.7.10.20.457
1kboFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.456
1nooCAHCamphor 5-monooxygenase1.14.15.10.456
2iko7IGRenin3.4.23.150.456
3gstGPRGlutathione S-transferase Mu 12.5.1.180.456
3vyeVYERenin3.4.23.150.456
4hp8NAP2-deoxy-D-gluconate 3-dehydrogenase/0.456
1bmkSB5Mitogen-activated protein kinase 14/0.455
1n83CLRNuclear receptor ROR-alpha/0.455
1qbgFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.455
2zazGK1Mitogen-activated protein kinase 14/0.455
3ggpNADPrephenate dehydrogenase/0.455
3o8tBMUMitogen-activated protein kinase 14/0.455
3ukuC69Actin-related protein 3/0.455
4nfn2KCTau-tubulin kinase 12.7.11.10.455
1agwSU2Fibroblast growth factor receptor 1/0.454
1k6pXN3Gag-Pol polyprotein3.4.23.160.454
1msmJE2Gag-Pol polyprotein3.4.23.160.454
2ft9CHDFatty acid-binding protein 2, liver/0.454
2nruT12Interleukin-1 receptor-associated kinase 42.7.11.10.454
3ieuGDPGTPase Era/0.454
3ol5SAWCamphor 5-monooxygenase1.14.15.10.454
4kbc1QJCasein kinase I isoform delta2.7.11.10.454
4xumIMNPeroxisome proliferator-activated receptor gamma/0.454
1xl5190Gag-Pol polyprotein3.4.23.160.453
2igoFADPyranose 2-oxidase/0.453
3ma301ISerine/threonine-protein kinase pim-12.7.11.10.453
4c7kNAPCorticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.453
4ic7ANPMitogen-activated protein kinase 72.7.11.240.453
4qmxH8HSerine/threonine-protein kinase 242.7.11.10.453
1jpaANPEphrin type-B receptor 22.7.10.10.452
1szmBI4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.452
2uzlC94Cyclin-dependent kinase 22.7.11.220.452
3lqfNADGalactitol dehydrogenase/0.452
3o9gF53Gag-Pol polyprotein/0.452
3oogYTPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.452
3sabF78Protease/0.452
3u9n09HSerine/threonine-protein kinase Chk12.7.11.10.452
4aoxFADSteroid monooxygenase/0.452
4hbgNDP3-oxoacyl-[acyl-carrier-protein] reductase1.1.1.1000.452
4jx1CAMCamphor 5-monooxygenase1.14.15.10.452
1dhrNADDihydropteridine reductase1.5.1.340.451
1kbqFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.451
1lsoNADHydroxyacyl-coenzyme A dehydrogenase, mitochondrial1.1.1.350.451
1w06W05Isopenicillin N synthase1.21.3.10.451
3iaeD7KBenzaldehyde lyase/0.451
3mdvCL6Cholesterol 24-hydroxylase/0.451
1bxoPP7Penicillopepsin-13.4.23.200.450
1bygSTUTyrosine-protein kinase CSK/0.450
1rbzKT5Trifunctional purine biosynthetic protein adenosine-32.1.2.20.450
1re7FOLDihydrofolate reductase1.5.1.30.450
1t88CAMCamphor 5-monooxygenase1.14.15.10.450
1yqj6NPMitogen-activated protein kinase 14/0.450
2f1kNAPPrephenate dehydrogenase/0.450
3d91REMRenin3.4.23.150.450
4ei7GDPPlasmid replication protein RepX/0.450
4ez8DHFThymidylate synthase2.1.1.450.450
4ft7H3KSerine/threonine-protein kinase Chk12.7.11.10.450
5cpbNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.450
5d3qGDPDynamin-13.6.5.50.450
2aquDR7Gag-Pol polyprotein3.4.23.160.449
2objVRVSerine/threonine-protein kinase pim-12.7.11.10.449
3a99ANPSerine/threonine-protein kinase pim-12.7.11.10.449
3dheANDEstradiol 17-beta-dehydrogenase 11.1.1.620.449
3fwiCAMCamphor 5-monooxygenase1.14.15.10.449
3zsh469Mitogen-activated protein kinase 14/0.449
5a3bAPRSIR2 family protein/0.449
2broDF2Serine/threonine-protein kinase Chk12.7.11.10.448
2g1o2IGRenin3.4.23.150.448
2qblCAMCamphor 5-monooxygenase1.14.15.10.448
2qbmCAMCamphor 5-monooxygenase1.14.15.10.448
2qd7065Gag-Pol polyprotein3.4.23.160.448
2vd5BI8Myotonin-protein kinase2.7.11.10.448
3a1nNADNDP-sugar epimerase/0.448
3bv2P38Mitogen-activated protein kinase 14/0.448
3gi6D78Gag-Pol polyprotein/0.448
3l63CAMCamphor 5-monooxygenase1.14.15.10.448
4gk3L87Ephrin type-A receptor 32.7.10.10.448
5a4kFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.448
1zrzBI1Protein kinase C iota type2.7.11.130.447
2y5kYCUFructose-1,6-bisphosphatase 13.1.3.110.447
3e5rNADGlyceraldehyde-3-phosphate dehydrogenase 1, cytosolic1.2.1.120.447
3fsfFSSMitogen-activated protein kinase 14/0.447
3ggxGGXGag-Pol polyprotein/0.447
3t8oATPRhodopsin kinase/0.447
4gk2L66Ephrin type-A receptor 32.7.10.10.447
4hxyNDPPlm1/0.447
4nbwNADShort-chain dehydrogenase/reductase SDR/0.447
4tuvCPZCytochrome P450 1191.140.447
1nvqUCNSerine/threonine-protein kinase Chk12.7.11.10.446
2c3qGTXGlutathione S-transferase theta-12.5.1.180.446
2ien017Gag-Pol polyprotein3.4.23.160.446
2qo9ANPEphrin type-A receptor 32.7.10.10.446
3syiFADSulfide-quinone reductase/0.446
4bb3KKAIsopenicillin N synthase1.21.3.10.446
4g7gVFVLanosterol 14-alpha-demethylase/0.446
4gh5NADShort-chain dehydrogenase/reductase SDR/0.446
4n5nNAPAcetoacetyl-CoA reductase1.1.1.360.446
1jgtAPCCarboxyethyl-arginine beta-lactam-synthase6.3.3.40.445
1xe55FEPlasmepsin-23.4.23.390.445
2oorNADNAD(P) transhydrogenase subunit alpha part 11.6.1.20.445
2r5tANPSerine/threonine-protein kinase Sgk12.7.11.10.445
3gc9B45Mitogen-activated protein kinase 112.7.11.240.445
3ndxRITGag-Pol polyprotein3.4.23.160.445
3oagLPQRenin3.4.23.150.445
3sa6F71Protease/0.445
3w33W19Epidermal growth factor receptor2.7.10.10.445
4d0l093Phosphatidylinositol 4-kinase beta2.7.1.670.445
4i8zG08Gag-Pol polyprotein3.4.23.160.445
1h69FADNAD(P)H dehydrogenase [quinone] 11.6.5.20.444
1ke9LS5Cyclin-dependent kinase 22.7.11.220.444
1t85CAMCamphor 5-monooxygenase1.14.15.10.444
1zxmANPDNA topoisomerase 2-alpha5.99.1.30.444
2dteNAIGlucose 1-dehydrogenase related protein/0.444
2qi4MZ6Gag-Pol polyprotein/0.444
2qi7MZ9Gag-Pol polyprotein/0.444
2vzmNRBCytochrome P450 monooxygenase PikC/0.444
3ekyDR7Gag-Pol polyprotein3.4.23.160.444
3ggoNAIPrephenate dehydrogenase/0.444
3n0tOPYDipeptidyl peptidase 23.4.14.20.444
3qt62P0Mevalonate diphosphate decarboxylase/0.444
3sx2NADUncharacterized protein/0.444
4l49CAMCamphor 5-monooxygenase1.14.15.10.444
5e8wSTUTGF-beta receptor type-12.7.11.300.444
1c6zROCProtease/0.443
1dw60Q4Gag-Pol polyprotein3.4.23.160.443
1gg5FADNAD(P)H dehydrogenase [quinone] 11.6.5.20.443
1nvsUCMSerine/threonine-protein kinase Chk12.7.11.10.443
1phhFADp-hydroxybenzoate hydroxylase/0.443
1sh9RITGag-Pol polyprotein3.4.23.160.443
1vijBAYGag-Pol polyprotein/0.443
2a1mCAMCamphor 5-monooxygenase1.14.15.10.443
2o23NAD3-hydroxyacyl-CoA dehydrogenase type-21.1.1.350.443
3c1tMYCDihydroflavonol 4-reductase1.1.1.2190.443
3gi5K62Gag-Pol polyprotein/0.443
3invNDPBifunctional dihydrofolate reductase-thymidylate synthase1.5.1.30.443
3lctADPALK tyrosine kinase receptor2.7.10.10.443
3own3OWRenin3.4.23.150.443
3sacAF8Protease/0.443
4b4w9L9Bifunctional protein FolD/0.443
4g95OAGDihydrofolate reductase1.5.1.30.443
4kl9NDPDihydrofolate reductase1.5.1.30.443
4yr9NADL-threonine 3-dehydrogenase, mitochondrial1.1.1.1030.443
6cp4CAMCamphor 5-monooxygenase1.14.15.10.443
1dyjDDFDihydrofolate reductase1.5.1.30.442
1hvsA77Gag-Pol polyprotein/0.442
1o76CAMCamphor 5-monooxygenase1.14.15.10.442
1x2hLPALipoate-protein ligase A6.3.1.200.442
1y57MPZProto-oncogene tyrosine-protein kinase Src2.7.10.20.442
2gcgNDPGlyoxylate reductase/hydroxypyruvate reductase1.1.1.790.442
2zgyGDPPlasmid segregation protein ParM/0.442
2zuiCAMCamphor 5-monooxygenase1.14.15.10.442
3ekqROCGag-Pol polyprotein3.4.23.160.442
3th8TH9Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)2.5.1.310.442
3v5l0G1Tyrosine-protein kinase ITK/TSK2.7.10.20.442
4bkz1WSMaternal embryonic leucine zipper kinase2.7.11.10.442
4ftq4HKSerine/threonine-protein kinase Chk12.7.11.10.442
4ix6ADPUncharacterized protein/0.442
4ly91YYGlucokinase regulatory protein/0.442
4y35F90Endothiapepsin3.4.23.220.442
1gzuNMNNicotinamide/nicotinic acid mononucleotide adenylyltransferase 12.7.7.10.441
1mvsDTMDihydrofolate reductase1.5.1.30.441
2e9oA58Serine/threonine-protein kinase Chk12.7.11.10.441
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.441
2qi6MZ8Gag-Pol polyprotein/0.441
3cmcNADGlyceraldehyde-3-phosphate dehydrogenase/0.441
3l8sBFFMitogen-activated protein kinase 14/0.441
3rwpABQ3-phosphoinositide-dependent protein kinase 12.7.11.10.441
3zptM8YGag-Pol polyprotein3.4.23.160.441
4b4vL34Bifunctional protein FolD/0.441
4fr4STUSerine/threonine-protein kinase 32A2.7.11.10.441
4hvh19RTyrosine-protein kinase JAK32.7.10.20.441
4ienCOAPutative acyl-CoA hydrolase/0.441
1dz4CAMCamphor 5-monooxygenase1.14.15.10.440
1hdcCBO3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase1.1.1.530.440
1hiiC20Gag-Pol polyprotein/0.440
1nqoNADGlyceraldehyde-3-phosphate dehydrogenase/0.440
1oiyN41Cyclin-dependent kinase 22.7.11.220.440
1qr6NADNAD-dependent malic enzyme, mitochondrial1.1.1.380.440
1t7kBH0Gag-Pol polyprotein3.4.23.160.440
1u7tNAD3-hydroxyacyl-CoA dehydrogenase type-21.1.1.350.440
1y0s331Peroxisome proliferator-activated receptor delta/0.440
2aznNAP2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase/0.440
2ev9NAPShikimate dehydrogenase (NADP(+))/0.440
2excJNKMitogen-activated protein kinase 102.7.11.240.440
2f4bEHAPeroxisome proliferator-activated receptor gamma/0.440
2i0dMUTProtease/0.440
2idw017Protease/0.440
2vx17X8Ephrin type-B receptor 42.7.10.10.440
2y6o1N1Ephrin type-A receptor 42.7.10.10.440
3el51UNGag-Pol polyprotein/0.440
3gqvNAPEnoyl reductase LovC10.440
3nugNADPyridoxal 4-dehydrogenase1.1.1.1070.440
3zw9NADPeroxisomal bifunctional enzyme1.1.1.350.440
4b99R4LMitogen-activated protein kinase 72.7.11.240.440
4dc0NDPPutative ketoacyl reductase1.3.10.440
4dqc017Gag-Pol polyprotein/0.440
4p8rNADGlyceraldehyde-3-phosphate dehydrogenase/0.440
4wkqIREEpidermal growth factor receptor2.7.10.10.440