1.460 Å
X-ray
2015-02-10
Name: | Endothiapepsin |
---|---|
ID: | CARP_CRYPA |
AC: | P11838 |
Organism: | Cryphonectria parasitica |
Reign: | Eukaryota |
TaxID: | 5116 |
EC Number: | 3.4.23.22 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 15.687 |
---|---|
Number of residues: | 22 |
Including | |
Standard Amino Acids: | 21 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.776 | 621.000 |
% Hydrophobic | % Polar |
---|---|
43.48 | 56.52 |
According to VolSite |
HET Code: | F90 |
---|---|
Formula: | C8H10ClN2S |
Molecular weight: | 201.696 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 56.88 % |
Polar Surface area: | 76.91 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 2 |
H-Bond Donors: | 2 |
Rings: | 1 |
Aromatic rings: | 1 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 3 |
X | Y | Z |
---|---|---|
1.78158 | 9.92808 | 9.51333 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
N5 | OD1 | ASP- 35 | 2.96 | 161.52 | H-Bond (Ligand Donor) |
C12 | CD1 | ILE- 217 | 3.94 | 0 | Hydrophobic |
N5 | OD1 | ASP- 219 | 2.76 | 156.03 | H-Bond (Ligand Donor) |
CL10 | CG2 | ILE- 300 | 3.85 | 0 | Hydrophobic |
C8 | CG2 | ILE- 300 | 3.72 | 0 | Hydrophobic |
CL10 | CG2 | ILE- 302 | 3.89 | 0 | Hydrophobic |
C9 | CG2 | ILE- 302 | 3.89 | 0 | Hydrophobic |
C7 | CD1 | ILE- 304 | 3.71 | 0 | Hydrophobic |