1.460 Å
X-ray
2015-02-10
| Name: | Endothiapepsin |
|---|---|
| ID: | CARP_CRYPA |
| AC: | P11838 |
| Organism: | Cryphonectria parasitica |
| Reign: | Eukaryota |
| TaxID: | 5116 |
| EC Number: | 3.4.23.22 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 15.687 |
|---|---|
| Number of residues: | 22 |
| Including | |
| Standard Amino Acids: | 21 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 1 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.776 | 621.000 |
| % Hydrophobic | % Polar |
|---|---|
| 43.48 | 56.52 |
| According to VolSite | |

| HET Code: | F90 |
|---|---|
| Formula: | C8H10ClN2S |
| Molecular weight: | 201.696 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 56.88 % |
| Polar Surface area: | 76.91 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 2 |
| H-Bond Donors: | 2 |
| Rings: | 1 |
| Aromatic rings: | 1 |
| Anionic atoms: | 0 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 3 |
| X | Y | Z |
|---|---|---|
| 1.78158 | 9.92808 | 9.51333 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| N5 | OD1 | ASP- 35 | 2.96 | 161.52 | H-Bond (Ligand Donor) |
| C12 | CD1 | ILE- 217 | 3.94 | 0 | Hydrophobic |
| N5 | OD1 | ASP- 219 | 2.76 | 156.03 | H-Bond (Ligand Donor) |
| CL10 | CG2 | ILE- 300 | 3.85 | 0 | Hydrophobic |
| C8 | CG2 | ILE- 300 | 3.72 | 0 | Hydrophobic |
| CL10 | CG2 | ILE- 302 | 3.89 | 0 | Hydrophobic |
| C9 | CG2 | ILE- 302 | 3.89 | 0 | Hydrophobic |
| C7 | CD1 | ILE- 304 | 3.71 | 0 | Hydrophobic |