sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3rs4 | GNP | GTPase HRas |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 3rs4 | GNP | GTPase HRas | / | 1.000 | |
| 4dlt | GNP | GTPase HRas | / | 0.868 | |
| 3lbh | GNP | GTPase HRas | / | 0.840 | |
| 3lbi | GNP | GTPase HRas | / | 0.835 | |
| 3lbn | GNP | GTPase HRas | / | 0.793 | |
| 3k8y | GNP | GTPase HRas | / | 0.704 | |
| 4g0n | GNP | GTPase HRas | / | 0.693 | |
| 4l9w | GNP | GTPase HRas | / | 0.693 | |
| 3rsl | GNP | GTPase HRas | / | 0.689 | |
| 3rs0 | GNP | GTPase HRas | / | 0.685 | |
| 4dlw | GNP | GTPase HRas | / | 0.680 | |
| 3rs7 | GNP | GTPase HRas | / | 0.677 | |
| 4dsn | GCP | GTPase KRas | / | 0.673 | |
| 3l8y | GNP | GTPase HRas | / | 0.670 | |
| 2rge | GNP | GTPase HRas | / | 0.669 | |
| 3oiw | GNP | GTPase HRas | / | 0.662 | |
| 3pit | GNP | Ras-related protein M-Ras | / | 0.662 | |
| 3i3s | GNP | GTPase HRas | / | 0.660 | |
| 4dlz | GNP | GTPase HRas | / | 0.658 | |
| 5dha | GNP | GTP-binding nuclear protein Ran | / | 0.658 | |
| 3kko | GNP | Ras-related protein M-Ras | / | 0.653 | |
| 2rgc | GNP | GTPase HRas | / | 0.651 | |
| 2c5l | GTP | GTPase HRas | / | 0.649 | |
| 5b2z | GNP | GTPase HRas | / | 0.645 | |
| 4rkf | GNP | Ras-related protein Rab-3 | / | 0.642 | |
| 5dif | GNP | GTP-binding nuclear protein Ran | / | 0.642 | |
| 2qme | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.640 | |
| 3ddc | GNP | GTPase HRas | / | 0.640 | |
| 4nyi | GNP | GTPase HRas | / | 0.635 | |
| 4dls | GNP | GTPase HRas | / | 0.633 | |
| 1g17 | GNP | Ras-related protein SEC4 | / | 0.632 | |
| 3x1z | GNP | Ras-related protein Rap-1b | / | 0.629 | |
| 3v4f | GNP | GTPase HRas | / | 0.628 | |
| 4hdo | GNP | Ras-related protein Rap-1b | / | 0.625 | |
| 4lhw | GNP | Ras-related protein Rab-8A | / | 0.625 | |
| 4nyj | GNP | GTPase HRas | / | 0.625 | |
| 3oiu | GNP | GTPase HRas | / | 0.624 | |
| 4k81 | GTP | GTPase HRas | / | 0.624 | |
| 1t91 | GTP | Ras-related protein Rab-7a | / | 0.622 | |
| 1ibr | GNP | GTP-binding nuclear protein Ran | / | 0.621 | |
| 3a58 | GNP | GTP-binding protein RHO1 | / | 0.620 | |
| 2rgb | GNP | GTPase HRas | / | 0.617 | |
| 3kud | GDP | GTPase HRas | / | 0.617 | |
| 1e96 | GTP | Ras-related C3 botulinum toxin substrate 1 | / | 0.612 | |
| 3a6p | GTP | GTP-binding nuclear protein Ran | / | 0.611 | |
| 4l9s | GDP | GTPase HRas | / | 0.611 | |
| 1yzq | GNP | Ras-related protein Rab-6A | / | 0.608 | |
| 4qxa | GTP | Ras-related protein Rab-9A | / | 0.608 | |
| 3kuc | GDP | Ras-related protein Rap-1A | / | 0.606 | |
| 5jlj | GNP | GTP-binding nuclear protein Ran | / | 0.604 | |
| 3e5h | GNP | Ras-related protein Rab-28 | / | 0.602 | |
| 3sbd | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.597 | |
| 4tq9 | GDP | GTPase KRas | / | 0.597 | |
| 3tso | GNP | Ras-related protein Rab-25 | / | 0.594 | |
| 1xts | GTP | GTP-binding protein Rheb | / | 0.593 | |
| 3w3z | GTP | GTP-binding nuclear protein Ran | / | 0.592 | |
| 4dlx | GNP | GTPase HRas | / | 0.592 | |
| 1mh1 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.591 | |
| 2bku | GTP | GTP-binding nuclear protein Ran | / | 0.589 | |
| 1kmq | GNP | Transforming protein RhoA | / | 0.588 | |
| 4mit | GTP | Rho-related protein racC | / | 0.588 | |
| 4hdq | GNP | Ras-related protein Rap-1b | / | 0.587 | |
| 4lv6 | GDP | GTPase KRas | / | 0.587 | |
| 2zet | GTP | Ras-related protein Rab-27B | / | 0.585 | |
| 3rab | GNP | Ras-related protein Rab-3A | / | 0.585 | |
| 4lpk | GDP | GTPase KRas | / | 0.585 | |
| 1zc4 | GNP | Ras-related protein Ral-A | / | 0.584 | |
| 3tgp | GNP | GTPase HRas | / | 0.583 | |
| 1xtr | GNP | GTP-binding protein Rheb | / | 0.582 | |
| 4l8g | GDP | GTPase KRas | / | 0.582 | |
| 1a2b | GSP | Transforming protein RhoA | / | 0.579 | |
| 1cxz | GSP | Transforming protein RhoA | / | 0.579 | |
| 2x19 | GTP | GTP-binding nuclear protein GSP1/CNR1 | / | 0.579 | |
| 3ea5 | GDP | GTP-binding nuclear protein Ran | / | 0.579 | |
| 1zd9 | GDP | ADP-ribosylation factor-like protein 8A | / | 0.577 | |
| 2gcp | GSP | Rho-related GTP-binding protein RhoC | / | 0.576 | |
| 1zc3 | GNP | Ras-related protein Ral-A | / | 0.575 | |
| 2fe4 | GDP | Ras-related protein Rab-6B | / | 0.575 | |
| 4epw | GDP | GTPase KRas | / | 0.574 | |
| 2gil | GTP | Ras-related protein Rab-6A | / | 0.572 | |
| 1s1c | GNP | Transforming protein RhoA | / | 0.571 | |
| 1zbd | GTP | Ras-related protein Rab-3A | / | 0.571 | |
| 2ce2 | GDP | GTPase HRas | / | 0.571 | |
| 3nbz | GTP | GTP-binding nuclear protein Ran | / | 0.571 | |
| 4wa7 | GDP | GTPase KRas | / | 0.571 | |
| 3kkq | GDP | Ras-related protein M-Ras | / | 0.570 | |
| 3oes | GNP | GTPase RhebL1 | / | 0.570 | |
| 4dlv | GNP | GTPase HRas | / | 0.570 | |
| 4dso | GSP | GTPase KRas | / | 0.566 | |
| 1vg8 | GNP | Ras-related protein Rab-7a | / | 0.564 | |
| 3bbp | GTP | Ras-related protein Rab-6A | / | 0.564 | |
| 4o2l | GTP | GTP-binding protein Rheb | / | 0.564 | |
| 3th5 | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.560 | |
| 4q03 | GDP | GTPase KRas | / | 0.559 | |
| 2ov2 | GCP | Ras-related C3 botulinum toxin substrate 3 | / | 0.557 | |
| 4o2r | GDP | GTP-binding protein Rheb | / | 0.557 | |
| 2fju | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.556 | |
| 3rs5 | GNP | GTPase HRas | / | 0.556 | |
| 4o25 | GTP | GTP-binding protein Rheb | / | 0.556 | |
| 4obe | GDP | GTPase KRas | / | 0.556 | |
| 3wyf | GTP | GTP-binding nuclear protein | / | 0.555 | |
| 4kvg | GTP | Ras-related protein Rap-1A | / | 0.555 | |
| 4lrw | GDP | GTPase KRas | / | 0.554 | |
| 1yu9 | GNP | Ras-related protein Rab-4A | / | 0.551 | |
| 4uj3 | GNP | Ras-related protein Rab-11A | / | 0.551 | |
| 3x1w | GDP | Ras-related protein Rap-1b | / | 0.550 | |
| 4epx | GDP | GTPase KRas | / | 0.548 | |
| 3oiv | GNP | GTPase HRas | / | 0.547 | |
| 3sbe | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.546 | |
| 1x1r | GDP | Ras-related protein M-Ras | / | 0.545 | |
| 2ffq | GSP | Ras-related protein Rab-6B | / | 0.545 | |
| 4luc | GDP | GTPase KRas | / | 0.545 | |
| 1z0a | GDP | Ras-related protein Rab-2A | / | 0.544 | |
| 3tnf | GNP | Ras-related protein Rab-8A | / | 0.543 | |
| 3k9l | GNP | GTPase HRas | / | 0.542 | |
| 1yhn | GTP | Ras-related protein Rab-7a | / | 0.540 | |
| 4q02 | GDP | GTPase KRas | / | 0.540 | |
| 3mjh | GTP | Ras-related protein Rab-5A | / | 0.537 | |
| 1d5c | GDP | GTPase (Rab6) | / | 0.535 | |
| 3kz1 | GSP | Transforming protein RhoA | / | 0.535 | |
| 4ql3 | GDP | GTPase KRas | / | 0.533 | |
| 1z0d | GDP | Ras-related protein Rab-5C | / | 0.532 | |
| 3law | GNP | Ras-related protein Rab-7a | / | 0.531 | |
| 4ol0 | GTP | GTP-binding nuclear protein Ran | / | 0.531 | |
| 4xvq | GNP | GTPase HRas | / | 0.530 | |
| 1ow3 | GDP | Transforming protein RhoA | / | 0.529 | |
| 1z2a | GDP | Ras-related protein Rab-23 | / | 0.529 | |
| 4js0 | GNP | Cell division control protein 42 homolog | / | 0.529 | |
| 3bc1 | GNP | Ras-related protein Rab-27A | / | 0.527 | |
| 1n6l | GTP | Ras-related protein Rab-5A | / | 0.525 | |
| 1oix | GDP | Ras-related protein Rab-11A | / | 0.525 | |
| 2fg5 | GNP | Ras-related protein Rab-31 | / | 0.524 | |
| 2p2l | GDP | Ras-related C3 botulinum toxin substrate 1 | / | 0.524 | |
| 1m7b | GTP | Rho-related GTP-binding protein RhoE | / | 0.523 | |
| 3wyg | GTP | GTP-binding nuclear protein GSP1/CNR1 | / | 0.523 | |
| 4ldj | GDP | GTPase KRas | / | 0.523 | |
| 2msc | GDP | MHC class I alpha chain | / | 0.521 | |
| 4xvr | GNP | GTPase HRas | / | 0.521 | |
| 5c46 | GSP | Ras-related protein Rab-11A | / | 0.520 | |
| 2bme | GNP | Ras-related protein Rab-4A | / | 0.519 | |
| 2w2x | GSP | Ras-related C3 botulinum toxin substrate 2 | / | 0.519 | |
| 3qbt | GNP | Ras-related protein Rab-8A | / | 0.519 | |
| 1k5d | GNP | GTP-binding nuclear protein Ran | / | 0.518 | |
| 2xtz | GSP | Guanine nucleotide-binding protein alpha-1 subunit | / | 0.518 | |
| 4dxa | GSP | Ras-related protein Rap-1b | / | 0.518 | |
| 2msd | GNP | MHC class I alpha chain | / | 0.515 | |
| 4dsu | GDP | GTPase KRas | / | 0.515 | |
| 1lfd | GNP | GTPase HRas | / | 0.514 | |
| 2rgg | GNP | GTPase HRas | / | 0.514 | |
| 4xoi | GTP | Transforming protein RhoA | / | 0.509 | |
| 2cl6 | CAG | GTPase HRas | / | 0.507 | |
| 2ic5 | GNP | Ras-related C3 botulinum toxin substrate 3 | / | 0.506 | |
| 3eg5 | GNP | Cell division control protein 42 homolog | / | 0.506 | |
| 4gzl | GNP | Ras-related C3 botulinum toxin substrate 1 | / | 0.506 | |
| 1z2c | GNP | Rho-related GTP-binding protein RhoC | / | 0.502 | |
| 4cid | ANP | EH domain-containing protein 2 | / | 0.501 | |
| 1gwn | GTP | Rho-related GTP-binding protein RhoE | / | 0.500 | |
| 4g2i | 0VQ | Vitamin D3 receptor | / | 0.498 | |
| 3cph | GDP | Ras-related protein SEC4 | / | 0.497 | |
| 2ic5 | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.496 | |
| 2g0n | GDP | Ras-related C3 botulinum toxin substrate 3 | / | 0.495 | |
| 3tkl | GTP | Ras-related protein Rab-1A | / | 0.495 | |
| 3ums | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.495 | |
| 1x1c | SAH | C-20 methyltransferase | / | 0.494 | |
| 5hpy | GDP | Transforming protein RhoA | / | 0.493 | |
| 1uad | GNP | Ras-related protein Ral-A | / | 0.488 | |
| 2q3f | GNP | Ras-related GTP-binding protein D | / | 0.488 | |
| 2j5x | GSP | ADP-ribosylation factor 6 | / | 0.487 | |
| 4ead | 0NP | Thymidine phosphorylase | 2.4.2.4 | 0.486 | |
| 2a9z | 26A | Adenosine kinase | 2.7.1.20 | 0.485 | |
| 2j0v | GDP | Rac-like GTP-binding protein ARAC7 | / | 0.485 | |
| 1g16 | GDP | Ras-related protein SEC4 | / | 0.483 | |
| 1tu3 | GNP | Ras-related protein Rab-5A | / | 0.482 | |
| 2o4j | VD4 | Vitamin D3 receptor | / | 0.482 | |
| 2a9y | 26A | Adenosine kinase | 2.7.1.20 | 0.480 | |
| 2mse | GNP | MHC class I alpha chain | / | 0.479 | |
| 2iod | MYC | Dihydroflavonol 4-reductase | 1.1.1.219 | 0.478 | |
| 2abj | CBC | Branched-chain-amino-acid aminotransferase, cytosolic | 2.6.1.42 | 0.477 | |
| 3vhx | GTP | ADP-ribosylation factor 6 | / | 0.476 | |
| 4uj5 | GNP | Ras-related protein Rab-11A | / | 0.476 | |
| 4edz | 0O5 | Hematopoietic prostaglandin D synthase | / | 0.475 | |
| 4pan | GDP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.475 | |
| 2o4r | VD5 | Vitamin D3 receptor | / | 0.472 | |
| 2zlc | VDX | Vitamin D3 receptor | / | 0.472 | |
| 4lzw | THM | Uridine phosphorylase | / | 0.472 | |
| 2fhj | MFN | Formylmethanofuran--tetrahydromethanopterin formyltransferase | 2.3.1.101 | 0.470 | |
| 2hb8 | MVD | Vitamin D3 receptor | / | 0.470 | |
| 4k5o | 1OT | M1 family aminopeptidase | 3.4.11 | 0.470 | |
| 1gia | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.469 | |
| 1ay0 | TPP | Transketolase 1 | 2.2.1.1 | 0.467 | |
| 3dvl | ATP | Circadian clock protein kinase KaiC | 2.7.11.1 | 0.467 | |
| 2cls | GTP | Rho-related GTP-binding protein Rho6 | / | 0.466 | |
| 1v8k | ANP | Kinesin-like protein KIF2C | / | 0.465 | |
| 2har | OCC | Vitamin D3 receptor | / | 0.464 | |
| 4mv1 | ADP | Biotin carboxylase | 6.3.4.14 | 0.464 | |
| 4mv3 | ACP | Biotin carboxylase | 6.3.4.14 | 0.464 | |
| 3pqb | VGP | Putative oxidoreductase | / | 0.463 | |
| 3r9x | GNP | GTPase Era | / | 0.463 | |
| 4qzu | RTL | Retinol-binding protein 2 | / | 0.462 | |
| 4xym | COA | Acyl-CoA synthetase (NDP forming) | / | 0.462 | |
| 4d0l | GSP | Ras-related protein Rab-11A | / | 0.461 | |
| 1pwy | AC2 | Purine nucleoside phosphorylase | 2.4.2.1 | 0.460 | |
| 1cul | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.459 | |
| 1db1 | VDX | Vitamin D3 receptor | / | 0.459 | |
| 1xmm | M7G | m7GpppX diphosphatase | 3.6.1.59 | 0.459 | |
| 4lb2 | DM5 | Serum albumin | / | 0.459 | |
| 1tka | N3T | Transketolase 1 | 2.2.1.1 | 0.458 | |
| 5kf1 | COA | Predicted acetyltransferase | / | 0.458 | |
| 3c14 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.457 | |
| 4ite | TEY | Vitamin D3 receptor | / | 0.457 | |
| 2rbe | ZMG | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.456 | |
| 2zrz | FNR | Isopentenyl-diphosphate delta-isomerase | / | 0.456 | |
| 3dge | ADP | Sensor histidine kinase | / | 0.456 | |
| 1x1d | SAH | C-20 methyltransferase | / | 0.455 | |
| 3w0a | DS5 | Vitamin D3 receptor | / | 0.455 | |
| 4y0v | GDP | ADP-ribosylation factor 1, putative | / | 0.455 | |
| 1kqw | RTL | Cellular retinol-binding protein type II | / | 0.454 | |
| 1wdt | GTP | Elongation factor G (EF-G-2) | / | 0.454 | |
| 2wu2 | CBE | Succinate dehydrogenase iron-sulfur subunit | 1.3.5.1 | 0.454 | |
| 2wu2 | CBE | Succinate dehydrogenase cytochrome b556 subunit | / | 0.454 | |
| 3dh8 | B4N | Uncharacterized protein PA1000 | / | 0.454 | |
| 3zei | AWH | O-acetylserine sulfhydrylase | / | 0.454 | |
| 4pao | GSP | Guanine nucleotide-binding protein G(i) subunit alpha-1 | / | 0.454 | |
| 5e8j | SAH | mRNA cap guanine-N7 methyltransferase | 2.1.1.56 | 0.454 | |
| 1bcp | ATP | Pertussis toxin subunit 4 | / | 0.453 | |
| 1bcp | ATP | Pertussis toxin subunit 5 | / | 0.453 | |
| 1m2o | GNP | Small COPII coat GTPase SAR1 | 3.6.5 | 0.453 | |
| 1txi | TX5 | Vitamin D3 receptor | / | 0.453 | |
| 1vhn | FMN | tRNA-dihydrouridine synthase | / | 0.453 | |
| 2oeg | UPG | UDP-glucose pyrophosphorylase | / | 0.453 | |
| 2ylo | TES | Androgen receptor | / | 0.453 | |
| 3w0c | 6DS | Vitamin D3 receptor | / | 0.453 | |
| 4j53 | 1J4 | Serine/threonine-protein kinase PLK1 | 2.7.11.21 | 0.453 | |
| 4l0q | NAD | Alcohol dehydrogenase class-3 | / | 0.453 | |
| 1ro9 | 8BR | cAMP-specific 3',5'-cyclic phosphodiesterase 4B | 3.1.4.53 | 0.452 | |
| 2gvd | FKP | Adenylate cyclase type 2 | / | 0.452 | |
| 2gvd | FKP | Adenylate cyclase type 5 | / | 0.452 | |
| 3kxo | KXO | Hematopoietic prostaglandin D synthase | / | 0.452 | |
| 3nh8 | DC2 | N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming) | 3.5.1.114 | 0.452 | |
| 3vrb | FTN | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial | / | 0.452 | |
| 3vrb | FTN | Cytochrome b-large subunit | / | 0.452 | |
| 4k5p | 1OS | M1 family aminopeptidase | 3.4.11 | 0.452 | |
| 1g2v | TTP | Glucose-1-phosphate thymidylyltransferase | / | 0.451 | |
| 1ky2 | GNP | GTP-binding protein YPT7 | / | 0.451 | |
| 2p1u | 4TN | Retinoic acid receptor RXR-alpha | / | 0.451 | |
| 3ada | NAD | Subunit alpha of sarocosine oxidase | / | 0.451 | |
| 3da2 | 4MD | Carbonic anhydrase 13 | 4.2.1.1 | 0.451 | |
| 3ref | GDP | Rho family GTPase | / | 0.451 | |
| 4cf7 | ADP | Adenylate kinase | / | 0.451 | |
| 4dvi | 2IW | Tankyrase-1 | 2.4.2.30 | 0.451 | |
| 4ylg | GDP | ADP-ribosylation factor 1, putative | / | 0.451 | |
| 5cp8 | TCU | Enoyl-[acyl-carrier-protein] reductase [NADH] | 1.3.1.9 | 0.451 | |
| 1s0z | EB1 | Vitamin D3 receptor | / | 0.450 | |
| 1tow | CRZ | Fatty acid-binding protein, adipocyte | / | 0.450 | |
| 1x1a | SAM | C-20 methyltransferase | / | 0.450 | |
| 1z7y | AA5 | Cysteine synthase 1 | 2.5.1.47 | 0.450 | |
| 2bxq | IMN | Serum albumin | / | 0.450 | |
| 3vmm | P0D | Alanine--anticapsin ligase | / | 0.450 | |
| 4c6u | TLG | 3-oxoacyl-ACP synthase | / | 0.450 | |
| 4fgc | PQ0 | NADPH-dependent 7-cyano-7-deazaguanine reductase | 1.7.1.13 | 0.450 | |
| 4xyb | NDP | Formate dehydrogenase | / | 0.450 | |
| 2wu5 | CBE | Succinate dehydrogenase iron-sulfur subunit | 1.3.5.1 | 0.449 | |
| 2wu5 | CBE | Succinate dehydrogenase cytochrome b556 subunit | / | 0.449 | |
| 2x06 | NAD | L-sulfolactate dehydrogenase | / | 0.449 | |
| 3m7r | VDX | Vitamin D3 receptor | / | 0.449 | |
| 3x02 | 5GP | Phosphatidylinositol 5-phosphate 4-kinase type-2 beta | 2.7.1.149 | 0.449 | |
| 4fhi | 0S4 | Vitamin D3 receptor A | / | 0.449 | |
| 4itr | GDP | Cell division control protein 42 homolog | / | 0.449 | |
| 4xg1 | LLP | Diaminopimelate decarboxylase | / | 0.449 | |
| 1am4 | GNP | Cell division control protein 42 homolog | / | 0.448 | |
| 1mcz | RMN | Benzoylformate decarboxylase | 4.1.1.7 | 0.448 | |
| 2rdn | 1PL | 1-deoxypentalenic acid 11-beta-hydroxylase | 1.14.11.35 | 0.448 | |
| 3akm | 11D | Fatty acid-binding protein, intestinal | / | 0.448 | |
| 4dzz | ADP | Plasmid partitioning protein ParF | / | 0.448 | |
| 4gzm | GSP | Ras-related C3 botulinum toxin substrate 1 | / | 0.448 | |
| 1cul | FOK | Adenylate cyclase type 2 | / | 0.447 | |
| 1cul | FOK | Adenylate cyclase type 5 | / | 0.447 | |
| 1s19 | MC9 | Vitamin D3 receptor | / | 0.447 | |
| 2iut | AGS | DNA translocase FtsK | / | 0.447 | |
| 2vcx | D26 | Hematopoietic prostaglandin D synthase | / | 0.447 | |
| 3cx8 | GSP | Guanine nucleotide-binding protein subunit alpha-13 | / | 0.447 | |
| 3k4s | 0MO | cAMP-specific 3',5'-cyclic phosphodiesterase 4D | 3.1.4.53 | 0.447 | |
| 3k7m | FAD | 6-hydroxy-L-nicotine oxidase | / | 0.447 | |
| 3n8x | NIM | Prostaglandin G/H synthase 1 | 1.14.99.1 | 0.447 | |
| 4bn1 | ADP | Aurora kinase A | 2.7.11.1 | 0.447 | |
| 4g0k | 0VS | Glutathionyl-hydroquinone reductase YqjG | 1.8 | 0.447 | |
| 1aqx | GTD | Glutathione S-transferase P | 2.5.1.18 | 0.446 | |
| 1azt | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.446 | |
| 2dy9 | ADP | Nucleoside diphosphate kinase | 2.7.4.6 | 0.446 | |
| 2xvv | 9DN | Serum albumin | / | 0.446 | |
| 3c0i | 3AM | Peripheral plasma membrane protein CASK | 2.7.11.1 | 0.446 | |
| 3ddw | 055 | Glycogen phosphorylase, liver form | 2.4.1.1 | 0.446 | |
| 3dhe | AND | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.446 | |
| 4ihj | GTP | Tubulin alpha-1B chain | / | 0.446 | |
| 4itf | TFY | Vitamin D3 receptor | / | 0.446 | |
| 4m8e | 29V | Retinoic acid receptor RXR-alpha | / | 0.446 | |
| 4wuo | NAD | 3-isopropylmalate dehydrogenase | 1.1.1.85 | 0.446 | |
| 1r2j | FAD | FkbI | / | 0.445 | |
| 2r6j | NDP | Eugenol synthase 1 | 1.1.1.318 | 0.445 | |
| 3hpq | AP5 | Adenylate kinase | / | 0.445 | |
| 3tif | ADP | Uncharacterized ABC transporter ATP-binding protein MJ0796 | / | 0.445 | |
| 1xoq | ROF | cAMP-specific 3',5'-cyclic phosphodiesterase 4D | 3.1.4.53 | 0.444 | |
| 2ydd | 2AM | 2',3'-cyclic-nucleotide 3'-phosphodiesterase | 3.1.4.37 | 0.444 | |
| 3c16 | GSP | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | / | 0.444 | |
| 3mjr | AC2 | Deoxycytidine kinase | 2.7.1.74 | 0.444 | |
| 4azw | ATP | O-antigen chain terminator bifunctional methyltransferase/kinase WbdD | / | 0.444 | |
| 4bfz | ZVZ | Pantothenate kinase | 2.7.1.33 | 0.444 | |
| 4kp6 | 1S1 | cAMP-specific 3',5'-cyclic phosphodiesterase 4B | 3.1.4.53 | 0.444 | |
| 4rr7 | A3S | Probable threonine--tRNA ligase 2 | 6.1.1.3 | 0.444 | |
| 2hb7 | O1C | Vitamin D3 receptor | / | 0.443 | |
| 2xvw | 9NR | Serum albumin | / | 0.443 | |
| 3v2u | ATP | Protein GAL3 | / | 0.443 | |
| 4ao4 | PLK | Beta-transaminase | / | 0.443 | |
| 5c80 | URI | Uridine phosphorylase | / | 0.443 | |
| 5iqd | GNP | Bifunctional AAC/APH | 2.3.1 | 0.443 | |
| 5je3 | SAH | Methyl transferase | / | 0.443 | |
| 5li5 | THR_ALA_ASN_PRO_SEP | KLTH0G14146p | / | 0.443 | |
| 1qyw | 5SD | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.442 | |
| 1t65 | DHT | Androgen receptor | / | 0.442 | |
| 2rqf | JH3 | Hemolymph juvenile hormone binding protein | / | 0.442 | |
| 2vbd | V10 | Isopenicillin N synthase | 1.21.3.1 | 0.442 | |
| 2vig | FAD | Short-chain specific acyl-CoA dehydrogenase, mitochondrial | 1.3.8.1 | 0.442 | |
| 3maa | FKP | Adenylate cyclase type 2 | / | 0.442 | |
| 3maa | FKP | Adenylate cyclase type 5 | / | 0.442 | |
| 5c3j | UQ1 | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial | / | 0.442 | |
| 5c3j | UQ1 | Succinate dehydrogenase cytochrome b560 | / | 0.442 | |
| 5jtb | ZMA | Adenosine receptor A2a | / | 0.442 | |
| 1q12 | ATP | Maltose/maltodextrin import ATP-binding protein MalK | / | 0.441 | |
| 3a78 | 3EV | Vitamin D3 receptor | / | 0.441 | |
| 3wqu | ATP | Cell division protein FtsA | / | 0.441 | |
| 1klk | PMD | Dihydrofolate reductase | 1.5.1.3 | 0.440 | |
| 2aa2 | AS4 | Mineralocorticoid receptor | / | 0.440 | |
| 2qzr | S79 | Queuine tRNA-ribosyltransferase | 2.4.2.29 | 0.440 | |
| 2zru | FMN | Isopentenyl-diphosphate delta-isomerase | / | 0.440 | |
| 3q7d | NPX | Prostaglandin G/H synthase 2 | 1.14.99.1 | 0.440 | |
| 3t1t | GDP | Probable gliding protein mglA | / | 0.440 | |
| 3up0 | D7S | aceDAF-12 | / | 0.440 | |
| 3zu2 | NAI | Enoyl-[acyl-carrier-protein] reductase [NADH] | / | 0.440 | |
| 4goj | GNP | ADP-ribosylation factor-like protein 3 | / | 0.440 | |
| 4ybn | FAD | Flavin-nucleotide-binding protein | / | 0.440 |