1.800 Å
X-ray
2008-06-17
| Name: | Uncharacterized protein PA1000 |
|---|---|
| ID: | Y1000_PSEAE |
| AC: | P20581 |
| Organism: | Pseudomonas aeruginosa |
| Reign: | Bacteria |
| TaxID: | 208964 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 35.225 |
|---|---|
| Number of residues: | 31 |
| Including | |
| Standard Amino Acids: | 29 |
| Non Standard Amino Acids: | 2 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | FE FE |
| Ligandability | Volume (Å3) |
|---|---|
| 1.060 | 513.000 |
| % Hydrophobic | % Polar |
|---|---|
| 65.79 | 34.21 |
| According to VolSite | |

| HET Code: | B4N |
|---|---|
| Formula: | C12H8N2O8P |
| Molecular weight: | 339.174 g/mol |
| DrugBank ID: | DB07418 |
| Buried Surface Area: | 73.14 % |
| Polar Surface area: | 160.03 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 8 |
| H-Bond Donors: | 0 |
| Rings: | 2 |
| Aromatic rings: | 2 |
| Anionic atoms: | 3 |
| Cationic atoms: | 2 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 6 |
| X | Y | Z |
|---|---|---|
| -17.5115 | 2.33339 | -11.2094 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| CAM | CB | HIS- 71 | 3.97 | 0 | Hydrophobic |
| CAL | CB | ALA- 182 | 4.5 | 0 | Hydrophobic |
| CAK | CB | ALA- 182 | 3.57 | 0 | Hydrophobic |
| OAA | CZ | ARG- 191 | 3.82 | 0 | Ionic (Protein Cationic) |
| OAA | NH1 | ARG- 191 | 2.8 | 157.82 | H-Bond (Protein Donor) |
| CAH | CD2 | LEU- 193 | 3.41 | 0 | Hydrophobic |
| CAG | CD1 | LEU- 193 | 3.65 | 0 | Hydrophobic |
| OAD | NE2 | GLN- 272 | 3.17 | 134.56 | H-Bond (Protein Donor) |
| CAK | CB | SER- 273 | 4.31 | 0 | Hydrophobic |
| CAL | CB | SER- 273 | 4.34 | 0 | Hydrophobic |
| CAJ | CD2 | LEU- 277 | 4.41 | 0 | Hydrophobic |
| CAQ | CD1 | LEU- 277 | 4.09 | 0 | Hydrophobic |
| CAH | CD2 | LEU- 277 | 3.73 | 0 | Hydrophobic |
| CAM | CD2 | LEU- 281 | 4.36 | 0 | Hydrophobic |
| CAN | CD2 | LEU- 281 | 4.06 | 0 | Hydrophobic |
| CAJ | CB | SER- 285 | 4.33 | 0 | Hydrophobic |
| OAE | NH1 | ARG- 288 | 3.45 | 175.91 | H-Bond (Protein Donor) |
| OAC | FE | FE- 998 | 2.47 | 0 | Metal Acceptor |
| OAF | FE | FE- 999 | 2.03 | 0 | Metal Acceptor |