2.800 Å
X-ray
2013-06-20
Name: | Serum albumin |
---|---|
ID: | ALBU_HUMAN |
AC: | P02768 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 100 % |
B-Factor: | 38.261 |
---|---|
Number of residues: | 21 |
Including | |
Standard Amino Acids: | 20 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.139 | 1434.375 |
% Hydrophobic | % Polar |
---|---|
44.71 | 55.29 |
According to VolSite |
HET Code: | DM5 |
---|---|
Formula: | C26H26NO9 |
Molecular weight: | 496.486 g/mol |
DrugBank ID: | DB01177 |
Buried Surface Area: | 36.16 % |
Polar Surface area: | 183.88 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 9 |
H-Bond Donors: | 3 |
Rings: | 5 |
Aromatic rings: | 2 |
Anionic atoms: | 2 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 3 |
X | Y | Z |
---|---|---|
-16.7889 | -11.5752 | 39.3328 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C6 | CG | LEU- 115 | 3.62 | 0 | Hydrophobic |
C18 | CG | LEU- 115 | 3.62 | 0 | Hydrophobic |
C19 | CD2 | LEU- 115 | 3.45 | 0 | Hydrophobic |
C6' | CG1 | VAL- 116 | 3.57 | 0 | Hydrophobic |
O13 | NZ | LYS- 137 | 2.7 | 144.46 | H-Bond (Protein Donor) |
C14 | CD | LYS- 137 | 3.72 | 0 | Hydrophobic |
C15 | CD | LYS- 137 | 3.97 | 0 | Hydrophobic |
C19 | CB | GLU- 141 | 4.41 | 0 | Hydrophobic |
C1 | CD1 | ILE- 142 | 3.89 | 0 | Hydrophobic |