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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3unj0BXCyclin-dependent kinase 22.7.11.22

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3unj0BXCyclin-dependent kinase 22.7.11.221.000
3qtzX42Cyclin-dependent kinase 22.7.11.220.658
3qu0X40Cyclin-dependent kinase 22.7.11.220.630
4fko20KCyclin-dependent kinase 22.7.11.220.613
3unk0BYCyclin-dependent kinase 22.7.11.220.605
3r9dX6BCyclin-dependent kinase 22.7.11.220.592
1urwI1PCyclin-dependent kinase 22.7.11.220.585
3qtuX44Cyclin-dependent kinase 22.7.11.220.574
3qtxX43Cyclin-dependent kinase 22.7.11.220.573
3s1h56ZCyclin-dependent kinase 22.7.11.220.569
3rpv26ZCyclin-dependent kinase 22.7.11.220.568
2w06FRVCyclin-dependent kinase 22.7.11.220.567
3r9hZ67Cyclin-dependent kinase 22.7.11.220.567
4fkq42KCyclin-dependent kinase 22.7.11.220.564
3rak03ZCyclin-dependent kinase 22.7.11.220.561
2xmyCDKCyclin-dependent kinase 22.7.11.220.557
4acm7YGCyclin-dependent kinase 22.7.11.220.556
3py0SU9Cyclin-dependent kinase 22.7.11.220.554
3r8lZ30Cyclin-dependent kinase 22.7.11.220.554
3qxoX65Cyclin-dependent kinase 22.7.11.220.550
3sqq99ZCyclin-dependent kinase 22.7.11.220.550
3rjc06ZCyclin-dependent kinase 22.7.11.220.549
1ke6LS2Cyclin-dependent kinase 22.7.11.220.546
3rmf20ZCyclin-dependent kinase 22.7.11.220.546
1pxmCK5Cyclin-dependent kinase 22.7.11.220.544
4fkr45KCyclin-dependent kinase 22.7.11.220.543
3lfnA27Cyclin-dependent kinase 22.7.11.220.542
1di8DTQCyclin-dependent kinase 22.7.11.220.539
3ral04ZCyclin-dependent kinase 22.7.11.220.539
3qxpX64Cyclin-dependent kinase 22.7.11.220.538
3qzhX69Cyclin-dependent kinase 22.7.11.220.536
3sw418KCyclin-dependent kinase 22.7.11.220.534
1ckpPVBCyclin-dependent kinase 22.7.11.220.532
3ti1B49Cyclin-dependent kinase 22.7.11.220.531
3sw719KCyclin-dependent kinase 22.7.11.220.528
2j9mPY8Cyclin-dependent kinase 22.7.11.220.525
4fkw62KCyclin-dependent kinase 22.7.11.220.525
3r6xX84Cyclin-dependent kinase 22.7.11.220.523
4fkv61KCyclin-dependent kinase 22.7.11.220.523
3s0o50ZCyclin-dependent kinase 22.7.11.220.522
1oiyN41Cyclin-dependent kinase 22.7.11.220.519
3roy22ZCyclin-dependent kinase 22.7.11.220.517
2btsU32Cyclin-dependent kinase 22.7.11.220.516
2iw84SPCyclin-dependent kinase 22.7.11.220.516
4ez30S0Cyclin-dependent kinase 22.7.11.220.516
3r1sX73Cyclin-dependent kinase 22.7.11.220.515
4bgh3I6Cyclin-dependent kinase 22.7.11.220.515
1ke5LS1Cyclin-dependent kinase 22.7.11.220.514
1oi9N20Cyclin-dependent kinase 22.7.11.220.514
2r64740Cyclin-dependent kinase 22.7.11.220.513
2btrU73Cyclin-dependent kinase 22.7.11.220.512
3qruX19Cyclin-dependent kinase 22.7.11.220.512
3r8vZ62Cyclin-dependent kinase 22.7.11.220.512
3r9oZ71Cyclin-dependent kinase 22.7.11.220.512
4ek816KCyclin-dependent kinase 22.7.11.220.511
3r7vZ02Cyclin-dependent kinase 22.7.11.220.510
2b52D42Cyclin-dependent kinase 22.7.11.220.509
1ke7LS3Cyclin-dependent kinase 22.7.11.220.508
2vtjLZ4Cyclin-dependent kinase 22.7.11.220.508
3r7eX88Cyclin-dependent kinase 22.7.11.220.508
3rk507ZCyclin-dependent kinase 22.7.11.220.508
1h1r6CPCyclin-dependent kinase 22.7.11.220.504
1ke9LS5Cyclin-dependent kinase 22.7.11.220.504
3qwjX6ACyclin-dependent kinase 22.7.11.220.504
2w05FRTCyclin-dependent kinase 22.7.11.220.503
3rni21ZCyclin-dependent kinase 22.7.11.220.503
3rpy27ZCyclin-dependent kinase 22.7.11.220.503
4fkpLS5Cyclin-dependent kinase 22.7.11.220.503
3ddqRRCCyclin-dependent kinase 22.7.11.220.502
1ke8LS4Cyclin-dependent kinase 22.7.11.220.501
3ezvEZVCyclin-dependent kinase 22.7.11.220.500
4fkt48KCyclin-dependent kinase 22.7.11.220.500
2c6o4SPCyclin-dependent kinase 22.7.11.220.499
2w1hL0FCyclin-dependent kinase 22.7.11.220.499
2c6iDT1Cyclin-dependent kinase 22.7.11.220.498
3qzgX67Cyclin-dependent kinase 22.7.11.220.498
3r7yZ04Cyclin-dependent kinase 22.7.11.220.498
2vtiLZ3Cyclin-dependent kinase 22.7.11.220.497
3ezrEZRCyclin-dependent kinase 22.7.11.220.496
3iggEFQCyclin-dependent kinase 22.7.11.220.496
3qqkX02Cyclin-dependent kinase 22.7.11.220.496
3rm618ZCyclin-dependent kinase 22.7.11.220.496
2fvdLIACyclin-dependent kinase 22.7.11.220.495
1oitHDTCyclin-dependent kinase 22.7.11.220.492
3qqfX07Cyclin-dependent kinase 22.7.11.220.492
3rm719ZCyclin-dependent kinase 22.7.11.220.492
3r28XA0Cyclin-dependent kinase 22.7.11.220.490
1h1s4SPCyclin-dependent kinase 22.7.11.220.489
1v1k3FPCyclin-dependent kinase 22.7.11.220.489
3ddpRC8Cyclin-dependent kinase 22.7.11.220.489
3raiX85Cyclin-dependent kinase 22.7.11.220.488
3s2pPMUCyclin-dependent kinase 22.7.11.220.488
2vu3LZECyclin-dependent kinase 22.7.11.220.487
1e9hINRCyclin-dependent kinase 22.7.11.220.486
1vyzN5BCyclin-dependent kinase 22.7.11.220.486
2a4lRRCCyclin-dependent kinase 22.7.11.220.486
3r73X87Cyclin-dependent kinase 22.7.11.220.485
4erwSTUCyclin-dependent kinase 22.7.11.220.485
2w17I19Cyclin-dependent kinase 22.7.11.220.484
4ek610KCyclin-dependent kinase 22.7.11.220.484
3pj8404Cyclin-dependent kinase 22.7.11.220.483
3r71X86Cyclin-dependent kinase 22.7.11.220.483
3rk708ZCyclin-dependent kinase 22.7.11.220.483
4fx360KCyclin-dependent kinase 22.7.11.220.483
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.482
3qtrX36Cyclin-dependent kinase 22.7.11.220.482
2uzoC62Cyclin-dependent kinase 22.7.11.220.481
3qx2X63Cyclin-dependent kinase 22.7.11.220.480
3rk909ZCyclin-dependent kinase 22.7.11.220.480
3tiz3TICyclin-dependent kinase 22.7.11.220.479
4qmpDKISerine/threonine-protein kinase 242.7.11.10.479
1gih1PUCyclin-dependent kinase 22.7.11.220.478
2iw94SPCyclin-dependent kinase 22.7.11.220.477
2r3o2SCCyclin-dependent kinase 22.7.11.220.477
3ig7EFPCyclin-dependent kinase 22.7.11.220.477
3ql8X01Cyclin-dependent kinase 22.7.11.220.477
3rpo24ZCyclin-dependent kinase 22.7.11.220.477
2nrySTUInterleukin-1 receptor-associated kinase 42.7.11.10.476
2vv9IM9Cyclin-dependent kinase 22.7.11.220.476
3r1yX76Cyclin-dependent kinase 22.7.11.220.476
1gij2PUCyclin-dependent kinase 22.7.11.220.475
2a0cCK9Cyclin-dependent kinase 22.7.11.220.475
4fks46KCyclin-dependent kinase 22.7.11.220.475
4kikKSAInhibitor of nuclear factor kappa-B kinase subunit beta2.7.11.100.475
1oguST8Cyclin-dependent kinase 22.7.11.220.473
3uli1N3Cyclin-dependent kinase 22.7.11.220.473
1pxkCK3Cyclin-dependent kinase 22.7.11.220.472
1unlRRCCyclin-dependent-like kinase 52.7.11.10.472
2r3iSCFCyclin-dependent kinase 22.7.11.220.472
4fki09KCyclin-dependent kinase 22.7.11.220.472
1pxpCK8Cyclin-dependent kinase 22.7.11.220.471
1ykr628Cyclin-dependent kinase 22.7.11.220.471
3pxyJWSCyclin-dependent kinase 22.7.11.220.471
1fvt106Cyclin-dependent kinase 22.7.11.220.470
1gii1PUCyclin-dependent kinase 22.7.11.220.469
1p2a5BNCyclin-dependent kinase 22.7.11.220.468
4lyn1YGCyclin-dependent kinase 22.7.11.220.468
1oiuN76Cyclin-dependent kinase 22.7.11.220.467
1vyw292Cyclin-dependent kinase 22.7.11.220.467
3r7iX9ICyclin-dependent kinase 22.7.11.220.467
1w8cN69Cyclin-dependent kinase 22.7.11.220.466
3r7uX96Cyclin-dependent kinase 22.7.11.220.466
2b55D31Cyclin-dependent kinase 22.7.11.220.465
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.465
3r83Z14Cyclin-dependent kinase 22.7.11.220.464
2wxvWXVCyclin-dependent kinase 22.7.11.220.463
3at4CCKCasein kinase II subunit alpha2.7.11.10.463
3rkb12ZCyclin-dependent kinase 22.7.11.220.463
2xnbY8LCyclin-dependent kinase 22.7.11.220.462
1q5kTMUGlycogen synthase kinase-3 beta2.7.11.260.461
4bcmT7ZCyclin-dependent kinase 22.7.11.220.461
4fkj11KCyclin-dependent kinase 22.7.11.220.461
1oiqHDUCyclin-dependent kinase 22.7.11.220.460
3r8zZ63Cyclin-dependent kinase 22.7.11.220.460
4bcnT9NCyclin-dependent kinase 22.7.11.220.459
2bhhRYUCyclin-dependent kinase 22.7.11.220.458
4kd11QKCyclin-dependent kinase 22.7.11.220.458
2r3kSCQCyclin-dependent kinase 22.7.11.220.457
3dogNNNCyclin-dependent kinase 22.7.11.220.456
1h0w207Cyclin-dependent kinase 22.7.11.220.455
3r1qX75Cyclin-dependent kinase 22.7.11.220.455
2r3mSCXCyclin-dependent kinase 22.7.11.220.454
2vtnLZ7Cyclin-dependent kinase 22.7.11.220.454
3qziX72Cyclin-dependent kinase 22.7.11.220.454
4eor4SPCyclin-dependent kinase 22.7.11.220.454
3rahO1ZCyclin-dependent kinase 22.7.11.220.453
1oirHDYCyclin-dependent kinase 22.7.11.220.451
2c5yMTWCyclin-dependent kinase 22.7.11.220.451
2r3lSCWCyclin-dependent kinase 22.7.11.220.451
4eoi1ROCyclin-dependent kinase 22.7.11.220.451
2r3p3SCCyclin-dependent kinase 22.7.11.220.450
3qcx3Q23-phosphoinositide-dependent protein kinase 12.7.11.10.450
1h1pCMGCyclin-dependent kinase 22.7.11.220.449
3s00Z60Cyclin-dependent kinase 22.7.11.220.449
2bheBRYCyclin-dependent kinase 22.7.11.220.448
3ggfGVDSerine/threonine-protein kinase 26/0.448
4fkg4CKCyclin-dependent kinase 22.7.11.220.448
1fvv107Cyclin-dependent kinase 22.7.11.220.447
3qqhX0ACyclin-dependent kinase 22.7.11.220.447
2r3r6SCCyclin-dependent kinase 22.7.11.220.446
3qtqX35Cyclin-dependent kinase 22.7.11.220.446
3qwkX62Cyclin-dependent kinase 22.7.11.220.446
2uznC96Cyclin-dependent kinase 22.7.11.220.445
2wotZZGTGF-beta receptor type-12.7.11.300.445
4eol1ROCyclin-dependent kinase 22.7.11.220.445
1pxlCK4Cyclin-dependent kinase 22.7.11.220.444
4bcpT3CCyclin-dependent kinase 22.7.11.220.444
2wpa889Cyclin-dependent kinase 22.7.11.220.443
3ofm4B0Casein kinase II subunit alpha'2.7.11.10.443
1unhIXMCyclin-dependent-like kinase 52.7.11.10.442
3tkh07SSerine/threonine-protein kinase Chk12.7.11.10.442
3u4uLNHCasein kinase II subunit alpha2.7.11.10.442
3r8pZ46Cyclin-dependent kinase 22.7.11.220.441
3rpr25ZCyclin-dependent kinase 22.7.11.220.441
3rzb02ZCyclin-dependent kinase 22.7.11.220.441
4eok4SPCyclin-dependent kinase 22.7.11.220.441
1c6yMK1Protease/0.440