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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2r3p3SCCyclin-dependent kinase 22.7.11.22

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2r3p3SCCyclin-dependent kinase 22.7.11.221.000
2r3mSCXCyclin-dependent kinase 22.7.11.220.698
2c6iDT1Cyclin-dependent kinase 22.7.11.220.655
2r3kSCQCyclin-dependent kinase 22.7.11.220.636
2r3fSC8Cyclin-dependent kinase 22.7.11.220.633
4ek816KCyclin-dependent kinase 22.7.11.220.628
2r3jSCJCyclin-dependent kinase 22.7.11.220.627
2r3iSCFCyclin-dependent kinase 22.7.11.220.620
4fkt48KCyclin-dependent kinase 22.7.11.220.615
2r3q5SCCyclin-dependent kinase 22.7.11.220.614
3r7yZ04Cyclin-dependent kinase 22.7.11.220.605
1ykr628Cyclin-dependent kinase 22.7.11.220.588
2r3lSCWCyclin-dependent kinase 22.7.11.220.585
3rpv26ZCyclin-dependent kinase 22.7.11.220.585
2uznC96Cyclin-dependent kinase 22.7.11.220.577
2btrU73Cyclin-dependent kinase 22.7.11.220.570
3qxoX65Cyclin-dependent kinase 22.7.11.220.568
2w05FRTCyclin-dependent kinase 22.7.11.220.565
3lfsA07Cyclin-dependent kinase 22.7.11.220.562
3pj8404Cyclin-dependent kinase 22.7.11.220.562
2a0cCK9Cyclin-dependent kinase 22.7.11.220.561
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.561
3r1yX76Cyclin-dependent kinase 22.7.11.220.561
3ral04ZCyclin-dependent kinase 22.7.11.220.561
2c6o4SPCyclin-dependent kinase 22.7.11.220.558
2j9mPY8Cyclin-dependent kinase 22.7.11.220.558
3r7uX96Cyclin-dependent kinase 22.7.11.220.557
3ezrEZRCyclin-dependent kinase 22.7.11.220.555
3iggEFQCyclin-dependent kinase 22.7.11.220.555
3r7iX9ICyclin-dependent kinase 22.7.11.220.555
2r3o2SCCyclin-dependent kinase 22.7.11.220.553
3s2pPMUCyclin-dependent kinase 22.7.11.220.552
3ezvEZVCyclin-dependent kinase 22.7.11.220.551
3lfqA28Cyclin-dependent kinase 22.7.11.220.550
3qxpX64Cyclin-dependent kinase 22.7.11.220.550
4bgh3I6Cyclin-dependent kinase 22.7.11.220.550
2r64740Cyclin-dependent kinase 22.7.11.220.549
3rni21ZCyclin-dependent kinase 22.7.11.220.549
1p2a5BNCyclin-dependent kinase 22.7.11.220.548
2r3r6SCCyclin-dependent kinase 22.7.11.220.546
1w0xOLOCyclin-dependent kinase 22.7.11.220.545
2w06FRVCyclin-dependent kinase 22.7.11.220.543
3rm719ZCyclin-dependent kinase 22.7.11.220.543
3lfnA27Cyclin-dependent kinase 22.7.11.220.542
3r71X86Cyclin-dependent kinase 22.7.11.220.542
2uzoC62Cyclin-dependent kinase 22.7.11.220.541
3roy22ZCyclin-dependent kinase 22.7.11.220.539
2r3gSC9Cyclin-dependent kinase 22.7.11.220.537
3rak03ZCyclin-dependent kinase 22.7.11.220.537
4fks46KCyclin-dependent kinase 22.7.11.220.536
3rjc06ZCyclin-dependent kinase 22.7.11.220.533
3r73X87Cyclin-dependent kinase 22.7.11.220.532
3rm618ZCyclin-dependent kinase 22.7.11.220.532
1fvt106Cyclin-dependent kinase 22.7.11.220.531
4fkq42KCyclin-dependent kinase 22.7.11.220.530
3r8lZ30Cyclin-dependent kinase 22.7.11.220.528
3r9dX6BCyclin-dependent kinase 22.7.11.220.528
3qqhX0ACyclin-dependent kinase 22.7.11.220.525
4ek610KCyclin-dependent kinase 22.7.11.220.525
4fkpLS5Cyclin-dependent kinase 22.7.11.220.525
2fvdLIACyclin-dependent kinase 22.7.11.220.524
1oitHDTCyclin-dependent kinase 22.7.11.220.523
3r1sX73Cyclin-dependent kinase 22.7.11.220.523
3ig7EFPCyclin-dependent kinase 22.7.11.220.522
2b52D42Cyclin-dependent kinase 22.7.11.220.521
3qruX19Cyclin-dependent kinase 22.7.11.220.520
4fkr45KCyclin-dependent kinase 22.7.11.220.520
1pxlCK4Cyclin-dependent kinase 22.7.11.220.517
3r7vZ02Cyclin-dependent kinase 22.7.11.220.517
1gih1PUCyclin-dependent kinase 22.7.11.220.516
1oiyN41Cyclin-dependent kinase 22.7.11.220.516
1ke6LS2Cyclin-dependent kinase 22.7.11.220.515
1vyzN5BCyclin-dependent kinase 22.7.11.220.515
2a4lRRCCyclin-dependent kinase 22.7.11.220.515
3qtrX36Cyclin-dependent kinase 22.7.11.220.515
3qzhX69Cyclin-dependent kinase 22.7.11.220.514
3raiX85Cyclin-dependent kinase 22.7.11.220.514
3s1h56ZCyclin-dependent kinase 22.7.11.220.514
3sqq99ZCyclin-dependent kinase 22.7.11.220.514
2w17I19Cyclin-dependent kinase 22.7.11.220.513
3qrtX14Cyclin-dependent kinase 22.7.11.220.513
1ke7LS3Cyclin-dependent kinase 22.7.11.220.512
1gii1PUCyclin-dependent kinase 22.7.11.220.511
3qtxX43Cyclin-dependent kinase 22.7.11.220.511
1pxmCK5Cyclin-dependent kinase 22.7.11.220.510
3qqfX07Cyclin-dependent kinase 22.7.11.220.509
3qzfX66Cyclin-dependent kinase 22.7.11.220.509
3r8zZ63Cyclin-dependent kinase 22.7.11.220.509
3fz1B98Cyclin-dependent kinase 22.7.11.220.508
1vyw292Cyclin-dependent kinase 22.7.11.220.507
1g5sI17Cyclin-dependent kinase 22.7.11.220.506
2bheBRYCyclin-dependent kinase 22.7.11.220.506
1v1k3FPCyclin-dependent kinase 22.7.11.220.505
2wpa889Cyclin-dependent kinase 22.7.11.220.504
1oiqHDUCyclin-dependent kinase 22.7.11.220.503
2iw84SPCyclin-dependent kinase 22.7.11.220.503
3r28XA0Cyclin-dependent kinase 22.7.11.220.503
4acm7YGCyclin-dependent kinase 22.7.11.220.503
1pxpCK8Cyclin-dependent kinase 22.7.11.220.502
2xmyCDKCyclin-dependent kinase 22.7.11.220.502
3qtuX44Cyclin-dependent kinase 22.7.11.220.501
1ke5LS1Cyclin-dependent kinase 22.7.11.220.500
2c6lDT4Cyclin-dependent kinase 22.7.11.220.500
3qwjX6ACyclin-dependent kinase 22.7.11.220.500
3r8pZ46Cyclin-dependent kinase 22.7.11.220.498
3rk909ZCyclin-dependent kinase 22.7.11.220.498
3r6xX84Cyclin-dependent kinase 22.7.11.220.497
3r83Z14Cyclin-dependent kinase 22.7.11.220.497
1w8cN69Cyclin-dependent kinase 22.7.11.220.496
3r9hZ67Cyclin-dependent kinase 22.7.11.220.496
2b54D05Cyclin-dependent kinase 22.7.11.220.495
1pxoCK7Cyclin-dependent kinase 22.7.11.220.494
2b53D23Cyclin-dependent kinase 22.7.11.220.494
2c6mDT5Cyclin-dependent kinase 22.7.11.220.494
4fx360KCyclin-dependent kinase 22.7.11.220.494
1urwI1PCyclin-dependent kinase 22.7.11.220.493
2c69CT8Cyclin-dependent kinase 22.7.11.220.493
2vttLZDCyclin-dependent kinase 22.7.11.220.493
2i40BLZCyclin-dependent kinase 22.7.11.220.492
3r1qX75Cyclin-dependent kinase 22.7.11.220.492
1oguST8Cyclin-dependent kinase 22.7.11.220.491
1oi9N20Cyclin-dependent kinase 22.7.11.220.491
2vtjLZ4Cyclin-dependent kinase 22.7.11.220.491
2vv9IM9Cyclin-dependent kinase 22.7.11.220.490
3qtzX42Cyclin-dependent kinase 22.7.11.220.490
3rk708ZCyclin-dependent kinase 22.7.11.220.490
3rahO1ZCyclin-dependent kinase 22.7.11.220.489
2vtnLZ7Cyclin-dependent kinase 22.7.11.220.488
2w1hL0FCyclin-dependent kinase 22.7.11.220.488
4eok4SPCyclin-dependent kinase 22.7.11.220.488
4fko20KCyclin-dependent kinase 22.7.11.220.487
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.486
1y91CT9Cyclin-dependent kinase 22.7.11.220.485
3pxyJWSCyclin-dependent kinase 22.7.11.220.484
4lyn1YGCyclin-dependent kinase 22.7.11.220.484
1pxkCK3Cyclin-dependent kinase 22.7.11.220.483
2vu3LZECyclin-dependent kinase 22.7.11.220.483
2vthLZ2Cyclin-dependent kinase 22.7.11.220.482
3ddpRC8Cyclin-dependent kinase 22.7.11.220.482
3qu0X40Cyclin-dependent kinase 22.7.11.220.482
4fkw62KCyclin-dependent kinase 22.7.11.220.482
3qx2X63Cyclin-dependent kinase 22.7.11.220.481
3qzgX67Cyclin-dependent kinase 22.7.11.220.481
4fkv61KCyclin-dependent kinase 22.7.11.220.481
1b39ATPCyclin-dependent kinase 22.7.11.220.480
3r9nZ68Cyclin-dependent kinase 22.7.11.220.480
3wblPDYCyclin-dependent kinase 22.7.11.220.480
3ddqRRCCyclin-dependent kinase 22.7.11.220.478
3qqkX02Cyclin-dependent kinase 22.7.11.220.478
3sw719KCyclin-dependent kinase 22.7.11.220.478
3ti1B49Cyclin-dependent kinase 22.7.11.220.478
1fvv107Cyclin-dependent kinase 22.7.11.220.477
3r8uZ31Cyclin-dependent kinase 22.7.11.220.476
1h1s4SPCyclin-dependent kinase 22.7.11.220.475
2vtiLZ3Cyclin-dependent kinase 22.7.11.220.475
3unk0BYCyclin-dependent kinase 22.7.11.220.475
1ke8LS4Cyclin-dependent kinase 22.7.11.220.474
1unlRRCCyclin-dependent-like kinase 52.7.11.10.474
2c6kDT2Cyclin-dependent kinase 22.7.11.220.474
2c6tDT5Cyclin-dependent kinase 22.7.11.220.474
1e9hINRCyclin-dependent kinase 22.7.11.220.473
3qziX72Cyclin-dependent kinase 22.7.11.220.473
4erwSTUCyclin-dependent kinase 22.7.11.220.473
4fkg4CKCyclin-dependent kinase 22.7.11.220.473
2vtsLZCCyclin-dependent kinase 22.7.11.220.472
1ke9LS5Cyclin-dependent kinase 22.7.11.220.471
1pyePM1Cyclin-dependent kinase 22.7.11.220.471
4eol1ROCyclin-dependent kinase 22.7.11.220.471
2wihP48Cyclin-dependent kinase 22.7.11.220.470
4ez30S0Cyclin-dependent kinase 22.7.11.220.470
2iw94SPCyclin-dependent kinase 22.7.11.220.469
2wxvWXVCyclin-dependent kinase 22.7.11.220.469
3sw418KCyclin-dependent kinase 22.7.11.220.469
3rk507ZCyclin-dependent kinase 22.7.11.220.468
3rzb02ZCyclin-dependent kinase 22.7.11.220.468
1h1q2A6Cyclin-dependent kinase 22.7.11.220.467
1y8yCT7Cyclin-dependent kinase 22.7.11.220.466
4fklCK2Cyclin-dependent kinase 22.7.11.220.465
2b55D31Cyclin-dependent kinase 22.7.11.220.464
3dogNNNCyclin-dependent kinase 22.7.11.220.463
3rpo24ZCyclin-dependent kinase 22.7.11.220.463
3r7eX88Cyclin-dependent kinase 22.7.11.220.462
4eor4SPCyclin-dependent kinase 22.7.11.220.462
1h0vUN4Cyclin-dependent kinase 22.7.11.220.461
1h1r6CPCyclin-dependent kinase 22.7.11.220.461
2btsU32Cyclin-dependent kinase 22.7.11.220.461
2vz6FEFCalcium/calmodulin-dependent protein kinase type II subunit alpha2.7.11.170.461
3qwkX62Cyclin-dependent kinase 22.7.11.220.461
1aq1STUCyclin-dependent kinase 22.7.11.220.460
2vtqLZACyclin-dependent kinase 22.7.11.220.460
2x1nX1NCyclin-dependent kinase 22.7.11.220.460
2c5yMTWCyclin-dependent kinase 22.7.11.220.459
3tiz3TICyclin-dependent kinase 22.7.11.220.459
4fki09KCyclin-dependent kinase 22.7.11.220.459
4kd11QKCyclin-dependent kinase 22.7.11.220.459
2zjwREFCasein kinase II subunit alpha2.7.11.10.458
3rmf20ZCyclin-dependent kinase 22.7.11.220.458
3rkb12ZCyclin-dependent kinase 22.7.11.220.456
3s0o50ZCyclin-dependent kinase 22.7.11.220.456
1pkdUCNCyclin-dependent kinase 22.7.11.220.455
3my5RFZCyclin-dependent kinase 22.7.11.220.455
3qqlX03Cyclin-dependent kinase 22.7.11.220.455
2duv371Cyclin-dependent kinase 22.7.11.220.454
3s00Z60Cyclin-dependent kinase 22.7.11.220.454
4bcpT3CCyclin-dependent kinase 22.7.11.220.453
2uzlC94Cyclin-dependent kinase 22.7.11.220.452
3qtqX35Cyclin-dependent kinase 22.7.11.220.452
3tnwF18Cyclin-dependent kinase 22.7.11.220.452
2iw6QQ2Cyclin-dependent kinase 22.7.11.220.451
2uzdC85Cyclin-dependent kinase 22.7.11.220.450
1dm2HMDCyclin-dependent kinase 22.7.11.220.449
2bhhRYUCyclin-dependent kinase 22.7.11.220.449
3r8vZ62Cyclin-dependent kinase 22.7.11.220.449
2c68CT6Cyclin-dependent kinase 22.7.11.220.448
1gij2PUCyclin-dependent kinase 22.7.11.220.447
3qtsX46Cyclin-dependent kinase 22.7.11.220.447
4fkj11KCyclin-dependent kinase 22.7.11.220.447
2bkzSBCCyclin-dependent kinase 22.7.11.220.444
1finATPCyclin-dependent kinase 22.7.11.220.443
1v0oINRCell division control protein 2 homolog2.7.11.220.442
2uzbC75Cyclin-dependent kinase 22.7.11.220.442
1ckpPVBCyclin-dependent kinase 22.7.11.220.440
1di8DTQCyclin-dependent kinase 22.7.11.220.440
4qmpDKISerine/threonine-protein kinase 242.7.11.10.440