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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1eouSMSCarbonic anhydrase 24.2.1.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
1eouSMSCarbonic anhydrase 24.2.1.11.000
3m2yBE0Carbonic anhydrase 24.2.1.10.662
3oikWZBCarbonic anhydrase 24.2.1.10.646
3sbiE90Carbonic anhydrase 24.2.1.10.619
3sbhE65Carbonic anhydrase 24.2.1.10.618
1oq5CELCarbonic anhydrase 24.2.1.10.615
3mnaDWHCarbonic anhydrase 24.2.1.10.611
3m5eJDRCarbonic anhydrase 24.2.1.10.608
4kniE1ECarbonic anhydrase 24.2.1.10.607
4itp1GDCarbonic anhydrase 24.2.1.10.603
3mmfD9HCarbonic anhydrase 24.2.1.10.602
2wegFBVCarbonic anhydrase 24.2.1.10.598
3ffpLC1Carbonic anhydrase 24.2.1.10.595
4kap1QVCarbonic anhydrase 24.2.1.10.591
1g1dFSBCarbonic anhydrase 24.2.1.10.590
3oysOYSCarbonic anhydrase 24.2.1.10.589
3mzcS6ICarbonic anhydrase 24.2.1.10.588
1kwrSG2Carbonic anhydrase 24.2.1.10.586
1if6FBUCarbonic anhydrase 24.2.1.10.583
3oimVZ5Carbonic anhydrase 24.2.1.10.583
2x7tWZBCarbonic anhydrase 24.2.1.10.581
1kwqSG1Carbonic anhydrase 24.2.1.10.579
3eft3BSCarbonic anhydrase 24.2.1.10.579
3qykIE2Carbonic anhydrase 24.2.1.10.576
3n3jWWVCarbonic anhydrase 24.2.1.10.575
3n0nP9BCarbonic anhydrase 24.2.1.10.572
4knjE1FCarbonic anhydrase 24.2.1.10.572
2h15B19Carbonic anhydrase 24.2.1.10.571
2powI7CCarbonic anhydrase 24.2.1.10.571
3dbuD8WCarbonic anhydrase 24.2.1.10.571
3f4xKLTCarbonic anhydrase 24.2.1.10.571
1i90INMCarbonic anhydrase 24.2.1.10.570
2eu3FF3Carbonic anhydrase 24.2.1.10.570
3s9tE49Carbonic anhydrase 24.2.1.10.570
1if4FBSCarbonic anhydrase 24.2.1.10.569
4m2vBZ1Carbonic anhydrase 24.2.1.10.569
3m98E02Carbonic anhydrase 24.2.1.10.566
3mhoJ43Carbonic anhydrase 24.2.1.10.566
3s8xE59Carbonic anhydrase 24.2.1.10.566
4ilx1EZCarbonic anhydrase 24.2.1.10.566
3m96E38Carbonic anhydrase 24.2.1.10.564
1ttm667Carbonic anhydrase 24.2.1.10.563
3igpDT7Carbonic anhydrase 24.2.1.10.563
1oknSTBCarbonic anhydrase 24.2.1.10.559
1xpz4TZCarbonic anhydrase 24.2.1.10.559
3saxE50Carbonic anhydrase 24.2.1.10.558
1a42BZUCarbonic anhydrase 24.2.1.10.556
4itoMPXCarbonic anhydrase 24.2.1.10.552
1if7SBRCarbonic anhydrase 24.2.1.10.550
3oy0OY0Carbonic anhydrase 24.2.1.10.550
1g52F2BCarbonic anhydrase 24.2.1.10.549
2wehFB1Carbonic anhydrase 24.2.1.10.549
3b4fTUOCarbonic anhydrase 24.2.1.10.549
4bf6X0QCarbonic anhydrase 24.2.1.10.548
3nb5R21Carbonic anhydrase 24.2.1.10.547
4dz7D02Carbonic anhydrase 24.2.1.10.547
4m2rBZ1Carbonic anhydrase 24.2.1.10.546
1oklMNSCarbonic anhydrase 24.2.1.10.545
3betCTFCarbonic anhydrase 24.2.1.10.545
1bn4AL9Carbonic anhydrase 24.2.1.10.544
3oyqOYQCarbonic anhydrase 24.2.1.10.543
3m2nJ74Carbonic anhydrase 24.2.1.10.542
3kigDA4Carbonic anhydrase 24.2.1.10.541
3t85SG7Carbonic anhydrase 24.2.1.10.541
1bnmAL8Carbonic anhydrase 24.2.1.10.538
3k2fNKXCarbonic anhydrase 24.2.1.10.538
3ml2SU0Carbonic anhydrase 24.2.1.10.538
4k0tD9ZCarbonic anhydrase 24.2.1.10.538
3dd0EZLCarbonic anhydrase 24.2.1.10.537
1cnwEG1Carbonic anhydrase 24.2.1.10.536
3dc3AZMCarbonic anhydrase 24.2.1.10.536
1g4jFFBCarbonic anhydrase 24.2.1.10.535
3dccD9ZCarbonic anhydrase 24.2.1.10.535
2wejFB2Carbonic anhydrase 24.2.1.10.534
3mhcARZCarbonic anhydrase 24.2.1.10.533
1cilETSCarbonic anhydrase 24.2.1.10.532
2weoFBWCarbonic anhydrase 24.2.1.10.532
3p5lIT5Carbonic anhydrase 24.2.1.10.530
1bntAL2Carbonic anhydrase 24.2.1.10.529
3hkuTORCarbonic anhydrase 24.2.1.10.527
4mo82VQCarbonic anhydrase 24.2.1.10.527
1bn1AL5Carbonic anhydrase 24.2.1.10.526
1bnnAL1Carbonic anhydrase 24.2.1.10.525
1g45FSBCarbonic anhydrase 24.2.1.10.525
3n4bWWZCarbonic anhydrase 24.2.1.10.525
4bf19FKCarbonic anhydrase 24.2.1.10.525
1cnyEG3Carbonic anhydrase 24.2.1.10.524
1g54FFBCarbonic anhydrase 24.2.1.10.523
3myqE27Carbonic anhydrase 24.2.1.10.523
1ydaAZMCarbonic anhydrase 24.2.1.10.522
1bnvAL7Carbonic anhydrase 24.2.1.10.521
2wd2MS5Carbonic anhydrase 24.2.1.10.521
3dcwEZLCarbonic anhydrase 24.2.1.10.521
1i91INQCarbonic anhydrase 24.2.1.10.520
3v2jAZMCarbonic anhydrase 24.2.1.10.520
3t84SG6Carbonic anhydrase 24.2.1.10.519
1if8SBSCarbonic anhydrase 24.2.1.10.518
3dcsMZMCarbonic anhydrase 24.2.1.10.517
3dd82C7Carbonic anhydrase 24.2.1.10.516
4k13ETSCarbonic anhydrase 24.2.1.10.516
1bnwTPDCarbonic anhydrase 24.2.1.10.515
1i8zINLCarbonic anhydrase 24.2.1.10.514
3bl1BL1Carbonic anhydrase 24.2.1.10.514
1zsbAZMCarbonic anhydrase 24.2.1.10.513
5fl49FKCarbonic anhydrase 94.2.1.10.512
3po6DT9Carbonic anhydrase 24.2.1.10.511
3t82SG4Carbonic anhydrase 24.2.1.10.511
4pxxCHDCarbonic anhydrase 24.2.1.10.510
3mdzEZLCarbonic anhydrase 74.2.1.10.509
4k0zMZMCarbonic anhydrase 24.2.1.10.508
1bnqAL4Carbonic anhydrase 24.2.1.10.506
3rz8RZ8Carbonic anhydrase 24.2.1.10.506
4n16CHDCarbonic anhydrase 24.2.1.10.506
3d8wD8WCarbonic anhydrase 24.2.1.10.504
2x7uWZACarbonic anhydrase 24.2.1.10.503
3l14I7BCarbonic anhydrase 24.2.1.10.502
5fltVJJCarbonic anhydrase 24.2.1.10.500
1bnuAL3Carbonic anhydrase 24.2.1.10.498
3dazMZMCarbonic anhydrase 24.2.1.10.497
3n2pAYXCarbonic anhydrase 24.2.1.10.497
1x1aSAMC-20 methyltransferase/0.492
1g4oBSBCarbonic anhydrase 24.2.1.10.491
4bfvZVVPantothenate kinase2.7.1.330.491
3zncBZ1Carbonic anhydrase 44.2.1.10.490
1i9nIOACarbonic anhydrase 24.2.1.10.489
1xq04TRCarbonic anhydrase 24.2.1.10.489
2a59LMZ6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.489
3fw3ETSCarbonic anhydrase 44.2.1.10.489
3m67E36Carbonic anhydrase 24.2.1.10.488
4xiwAZMCarbonic anhydrase, alpha type/0.487
3m40J45Carbonic anhydrase 24.2.1.10.486
2h4nAZMCarbonic anhydrase 24.2.1.10.485
1okmSABCarbonic anhydrase 24.2.1.10.483
4kp8E1GCarbonic anhydrase 124.2.1.10.483
1i9qIOFCarbonic anhydrase 24.2.1.10.479
4kp5E1FCarbonic anhydrase 124.2.1.10.478
3mhlJ71Carbonic anhydrase 24.2.1.10.477
4f1l0RYPoly [ADP-ribose] polymerase 142.4.2.300.476
4iwz1GOCarbonic anhydrase 24.2.1.10.476
1xl8152Peroxisomal carnitine O-octanoyltransferase2.3.1.1370.474
2a57CRM6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.474
3mhiJ90Carbonic anhydrase 24.2.1.10.474
4x5sAZMCarbonic anhydrase (Carbonate dehydratase)/0.474
2g1n1IGRenin3.4.23.150.473
2gv8NDPThiol-specific monooxygenase1.14.130.472
3f7bAG5Carbonic anhydrase 44.2.1.10.472
2g247IGRenin3.4.23.150.471
3h3qH13Collagen type IV alpha-3-binding protein/0.471
1kyxCRM6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.470
2qimZEAClass 10 plant pathogenesis-related protein/0.470
4kbyC2EStimulator of interferon genes protein/0.470
2cekN8TAcetylcholinesterase3.1.1.70.468
3ni5C1HCarbonic anhydrase 24.2.1.10.468
1x1bSAHC-20 methyltransferase/0.467
3h3r14HCollagen type IV alpha-3-binding protein/0.467
4b4vL34Bifunctional protein FolD/0.467
1rj6AZMCarbonic anhydrase 144.2.1.10.465
4lu3AZMCarbonic anhydrase 144.2.1.10.464
1ivsVAAValine--tRNA ligase6.1.1.90.463
2a58RBF6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.463
2q1uNADPutative nucleotide sugar epimerase/ dehydratase/0.463
3gwfNAPCyclohexanone monooxygenase/0.463
4bfwZVWPantothenate kinase2.7.1.330.463
2rqfJH3Hemolymph juvenile hormone binding protein/0.462
2q1qOSPCarbonic anhydrase 24.2.1.10.461
4f0rMTA5-methylthioadenosine/S-adenosylhomocysteine deaminase/0.461
2g1o2IGRenin3.4.23.150.460
4lutDCSAlanine racemase/0.460
1gpdNADGlyceraldehyde-3-phosphate dehydrogenase1.2.1.120.458
4c717RD3-oxoacyl-ACP synthase/0.458
2q1sNAIPutative nucleotide sugar epimerase/ dehydratase/0.457
1cnfFADNitrate reductase [NADH]1.7.1.10.456
1i9pIOECarbonic anhydrase 24.2.1.10.456
1nupNMNNicotinamide/nicotinic acid mononucleotide adenylyltransferase 3/0.456
2g21L1BRenin3.4.23.150.456
4mrm2BYGamma-aminobutyric acid type B receptor subunit 1/0.456
1kyvRBF6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.455
1xe65FPPlasmepsin-23.4.23.390.455
2ea2F77Methionine aminopeptidase 2/0.455
3h3sH15Collagen type IV alpha-3-binding protein/0.455
3h3t16HCollagen type IV alpha-3-binding protein/0.455
3ho9N3A3-oxoacyl-[acyl-carrier-protein] synthase 22.3.1.1790.455
4e2yJHZMethyltransferase/0.455
1enoNADEnoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic1.3.1.90.454
4djaFAD(6-4) photolyase/0.454
4gdy0X1Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial2.6.1.390.454
1bn3AL6Carbonic anhydrase 24.2.1.10.453
4kp61S1cAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.453
3d9zD9ZCarbonic anhydrase 24.2.1.10.452
3rbqGLY_ALA_GLY_ALA_DAOProtein unc-119 homolog A/0.452
4kfqKFQGlutamate receptor ionotropic, NMDA 1/0.452
3jsiWTCHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.451
4gh6LUOHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.451
1rneC60Renin3.4.23.150.450
2c9zQUEAnthocyanidin 3-O-glucosyltransferase 22.4.1.1150.450
2pzjNADPutative nucleotide sugar epimerase/ dehydratase/0.450
2q7oIMHPurine nucleoside phosphorylase2.4.2.10.450
4b2gV1NUncharacterized protein/0.450
2whqHI6Acetylcholinesterase3.1.1.70.449
3fapARDPeptidyl-prolyl cis-trans isomerase FKBP1A5.2.1.80.449
3fapARDSerine/threonine-protein kinase mTOR2.7.11.10.449
4r81FMNPredicted NADH dehydrogenase/0.449
1dmyAZMCarbonic anhydrase 5A, mitochondrial4.2.1.10.448
1jd0AZMCarbonic anhydrase 124.2.1.10.448
2g1s4IGRenin3.4.23.150.448
1h22E10Acetylcholinesterase3.1.1.70.447
2xupTZ5Acetylcholinesterase3.1.1.70.447
3dylPCGHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.447
3dyqPCGHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.447
1a5bIGPTryptophan synthase alpha chain/0.446
3ioeA7DPantothenate synthetase6.3.2.10.446
4p9dTMPDeoxycytidylate deaminase/0.446
1if5FBTCarbonic anhydrase 24.2.1.10.445
2dxiATPGlutamate--tRNA ligase6.1.1.170.445
2g1r3IGRenin3.4.23.150.445
3f7uAG4Carbonic anhydrase 44.2.1.10.445
4a2zVIQGlycylpeptide N-tetradecanoyltransferase/0.445
4c6zTLE3-oxoacyl-ACP synthase/0.445
4g2j0WFHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.445
4gddNAIUDP-galactopyranose mutase/0.445
1qbqHFPProtein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha/0.444
1qbqHFPProtein farnesyltransferase subunit beta2.5.1.580.444
3af1GDPPantothenate kinase2.7.1.330.444
3apwDP0Alpha-1-acid glycoprotein 2/0.444
3vswR31Renin3.4.23.150.444
1e66HUXAcetylcholinesterase3.1.1.70.443
2g1y5IGRenin3.4.23.150.443
2i65NADADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 13.2.2.60.443
4c49HCYCorticosteroid-binding globulin/0.443
4eagATP5'-AMP-activated protein kinase subunit gamma-1/0.443
1cnxEG2Carbonic anhydrase 24.2.1.10.442
3ha5SFGHydroxymycolate synthase MmaA42.1.10.442
3iqhTYR_ASP_ILECysteine synthase2.5.1.470.442
3wagTYDGlycosyltransferase/0.442
4b68NAPL-ornithine N(5)-monooxygenase/0.442
4ht2V50Carbonic anhydrase 124.2.1.10.442
1x1cSAHC-20 methyltransferase/0.441
1q51CAA1,4-dihydroxy-2-naphthoyl-CoA synthase/0.440
2g25TDKPyruvate dehydrogenase E1 component1.2.4.10.440
2iko7IGRenin3.4.23.150.440
2xuoTZ4Acetylcholinesterase3.1.1.70.440
3oqfS51Renin3.4.23.150.440
4mlp2CXCryptochrome-2/0.440
5kwvANPPantothenate synthetase/0.440
7stdCRPScytalone dehydratase4.2.1.940.440