2.000 Å
X-ray
2011-03-29
Name: | Protein unc-119 homolog A |
---|---|
ID: | U119A_HUMAN |
AC: | Q13432 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
D | 100 % |
B-Factor: | 21.919 |
---|---|
Number of residues: | 45 |
Including | |
Standard Amino Acids: | 44 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 1 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.314 | 462.375 |
% Hydrophobic | % Polar |
---|---|
55.47 | 44.53 |
According to VolSite |
HET Code: | GLY_ALA_GLY_ALA_DAO |
---|---|
Formula: | C10H19N4O4 |
Molecular weight: | 259.282 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 64.24 % |
Polar Surface area: | 132.01 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 4 |
Rings: | 0 |
Aromatic rings: | 0 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 7 |
X | Y | Z |
---|---|---|
44.9099 | -22.2191 | 9.1089 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
CB | CG | PHE- 88 | 4.12 | 0 | Hydrophobic |
CB | CD1 | PHE- 91 | 3.72 | 0 | Hydrophobic |
CB | CB | VAL- 129 | 4.03 | 0 | Hydrophobic |
CB | CG2 | VAL- 147 | 4 | 0 | Hydrophobic |
N | OE2 | GLU- 163 | 2.96 | 167.49 | H-Bond (Ligand Donor) |
N | OG | SER- 218 | 2.93 | 120.75 | H-Bond (Ligand Donor) |
O | ND2 | ASN- 230 | 2.96 | 142.67 | H-Bond (Protein Donor) |
N | O | HOH- 252 | 2.91 | 156.15 | H-Bond (Ligand Donor) |