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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3qtuX44Cyclin-dependent kinase 22.7.11.22

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3qtuX44Cyclin-dependent kinase 22.7.11.221.000
3rpv26ZCyclin-dependent kinase 22.7.11.220.648
3r73X87Cyclin-dependent kinase 22.7.11.220.571
3qu0X40Cyclin-dependent kinase 22.7.11.220.567
3rmf20ZCyclin-dependent kinase 22.7.11.220.564
1pxmCK5Cyclin-dependent kinase 22.7.11.220.558
3r71X86Cyclin-dependent kinase 22.7.11.220.556
2fvdLIACyclin-dependent kinase 22.7.11.220.550
3ezvEZVCyclin-dependent kinase 22.7.11.220.547
2c6o4SPCyclin-dependent kinase 22.7.11.220.545
3qzgX67Cyclin-dependent kinase 22.7.11.220.545
3qtzX42Cyclin-dependent kinase 22.7.11.220.544
3qxpX64Cyclin-dependent kinase 22.7.11.220.544
3lfnA27Cyclin-dependent kinase 22.7.11.220.541
3r9dX6BCyclin-dependent kinase 22.7.11.220.540
3qtxX43Cyclin-dependent kinase 22.7.11.220.538
3r7yZ04Cyclin-dependent kinase 22.7.11.220.538
3rpo24ZCyclin-dependent kinase 22.7.11.220.537
2c6iDT1Cyclin-dependent kinase 22.7.11.220.535
4acm7YGCyclin-dependent kinase 22.7.11.220.535
3rk909ZCyclin-dependent kinase 22.7.11.220.534
1oiyN41Cyclin-dependent kinase 22.7.11.220.533
2w06FRVCyclin-dependent kinase 22.7.11.220.533
3rm618ZCyclin-dependent kinase 22.7.11.220.533
1ke6LS2Cyclin-dependent kinase 22.7.11.220.532
4fko20KCyclin-dependent kinase 22.7.11.220.530
4bgh3I6Cyclin-dependent kinase 22.7.11.220.529
1p2a5BNCyclin-dependent kinase 22.7.11.220.528
1urwI1PCyclin-dependent kinase 22.7.11.220.528
3s1h56ZCyclin-dependent kinase 22.7.11.220.527
1vyzN5BCyclin-dependent kinase 22.7.11.220.526
2vu3LZECyclin-dependent kinase 22.7.11.220.525
3r1sX73Cyclin-dependent kinase 22.7.11.220.525
3rk507ZCyclin-dependent kinase 22.7.11.220.523
3rni21ZCyclin-dependent kinase 22.7.11.220.521
3unk0BYCyclin-dependent kinase 22.7.11.220.518
3unj0BXCyclin-dependent kinase 22.7.11.220.517
3qruX19Cyclin-dependent kinase 22.7.11.220.515
3r9hZ67Cyclin-dependent kinase 22.7.11.220.515
2w1hL0FCyclin-dependent kinase 22.7.11.220.514
3sw719KCyclin-dependent kinase 22.7.11.220.514
1fvt106Cyclin-dependent kinase 22.7.11.220.513
1ykr628Cyclin-dependent kinase 22.7.11.220.513
2btsU32Cyclin-dependent kinase 22.7.11.220.513
4fkr45KCyclin-dependent kinase 22.7.11.220.513
2xmyCDKCyclin-dependent kinase 22.7.11.220.512
3rak03ZCyclin-dependent kinase 22.7.11.220.512
3sqq99ZCyclin-dependent kinase 22.7.11.220.512
3rk708ZCyclin-dependent kinase 22.7.11.220.508
3rm719ZCyclin-dependent kinase 22.7.11.220.508
4fkw62KCyclin-dependent kinase 22.7.11.220.508
3roy22ZCyclin-dependent kinase 22.7.11.220.507
1oguST8Cyclin-dependent kinase 22.7.11.220.506
2bhhRYUCyclin-dependent kinase 22.7.11.220.506
3uli1N3Cyclin-dependent kinase 22.7.11.220.506
4fkv61KCyclin-dependent kinase 22.7.11.220.506
1y91CT9Cyclin-dependent kinase 22.7.11.220.505
4fkq42KCyclin-dependent kinase 22.7.11.220.504
1ke5LS1Cyclin-dependent kinase 22.7.11.220.502
2r3lSCWCyclin-dependent kinase 22.7.11.220.502
3r7vZ02Cyclin-dependent kinase 22.7.11.220.501
3ral04ZCyclin-dependent kinase 22.7.11.220.501
3rjc06ZCyclin-dependent kinase 22.7.11.220.501
3qzhX69Cyclin-dependent kinase 22.7.11.220.500
4fkt48KCyclin-dependent kinase 22.7.11.220.500
1ke7LS3Cyclin-dependent kinase 22.7.11.220.499
3ddqRRCCyclin-dependent kinase 22.7.11.220.499
1g5sI17Cyclin-dependent kinase 22.7.11.220.498
2btrU73Cyclin-dependent kinase 22.7.11.220.498
3qxoX65Cyclin-dependent kinase 22.7.11.220.498
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.497
3ezrEZRCyclin-dependent kinase 22.7.11.220.497
3r6xX84Cyclin-dependent kinase 22.7.11.220.497
3qqfX07Cyclin-dependent kinase 22.7.11.220.496
2w05FRTCyclin-dependent kinase 22.7.11.220.495
3wblPDYCyclin-dependent kinase 22.7.11.220.495
1fvv107Cyclin-dependent kinase 22.7.11.220.494
1pxkCK3Cyclin-dependent kinase 22.7.11.220.494
3rkb12ZCyclin-dependent kinase 22.7.11.220.494
1gih1PUCyclin-dependent kinase 22.7.11.220.493
2vttLZDCyclin-dependent kinase 22.7.11.220.493
1v1k3FPCyclin-dependent kinase 22.7.11.220.492
2a0cCK9Cyclin-dependent kinase 22.7.11.220.492
4ez30S0Cyclin-dependent kinase 22.7.11.220.492
4lyn1YGCyclin-dependent kinase 22.7.11.220.492
2vv9IM9Cyclin-dependent kinase 22.7.11.220.491
3qx2X63Cyclin-dependent kinase 22.7.11.220.491
2iw94SPCyclin-dependent kinase 22.7.11.220.490
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.490
4ek816KCyclin-dependent kinase 22.7.11.220.490
1h1s4SPCyclin-dependent kinase 22.7.11.220.489
1w8cN69Cyclin-dependent kinase 22.7.11.220.489
3r28XA0Cyclin-dependent kinase 22.7.11.220.489
2uzoC62Cyclin-dependent kinase 22.7.11.220.488
1pxlCK4Cyclin-dependent kinase 22.7.11.220.487
1h1r6CPCyclin-dependent kinase 22.7.11.220.486
2r3iSCFCyclin-dependent kinase 22.7.11.220.486
3s0o50ZCyclin-dependent kinase 22.7.11.220.485
4fkpLS5Cyclin-dependent kinase 22.7.11.220.485
3r8lZ30Cyclin-dependent kinase 22.7.11.220.484
3raiX85Cyclin-dependent kinase 22.7.11.220.484
3s2pPMUCyclin-dependent kinase 22.7.11.220.484
3sw418KCyclin-dependent kinase 22.7.11.220.484
3qtrX36Cyclin-dependent kinase 22.7.11.220.483
3r1qX75Cyclin-dependent kinase 22.7.11.220.483
2iw84SPCyclin-dependent kinase 22.7.11.220.482
2w17I19Cyclin-dependent kinase 22.7.11.220.482
3qqkX02Cyclin-dependent kinase 22.7.11.220.482
3qrtX14Cyclin-dependent kinase 22.7.11.220.482
4erwSTUCyclin-dependent kinase 22.7.11.220.482
2r3r6SCCyclin-dependent kinase 22.7.11.220.481
3pj8404Cyclin-dependent kinase 22.7.11.220.481
3r8vZ62Cyclin-dependent kinase 22.7.11.220.481
3py0SU9Cyclin-dependent kinase 22.7.11.220.480
3r8pZ46Cyclin-dependent kinase 22.7.11.220.480
4fx360KCyclin-dependent kinase 22.7.11.220.480
1pxpCK8Cyclin-dependent kinase 22.7.11.220.479
2j9mPY8Cyclin-dependent kinase 22.7.11.220.479
4fks46KCyclin-dependent kinase 22.7.11.220.479
1di8DTQCyclin-dependent kinase 22.7.11.220.478
2r64740Cyclin-dependent kinase 22.7.11.220.477
2vtiLZ3Cyclin-dependent kinase 22.7.11.220.476
2b52D42Cyclin-dependent kinase 22.7.11.220.475
3qqlX03Cyclin-dependent kinase 22.7.11.220.475
4ek610KCyclin-dependent kinase 22.7.11.220.475
4eor4SPCyclin-dependent kinase 22.7.11.220.475
1oitHDTCyclin-dependent kinase 22.7.11.220.474
3ddpRC8Cyclin-dependent kinase 22.7.11.220.473
3ig7EFPCyclin-dependent kinase 22.7.11.220.473
1h0w207Cyclin-dependent kinase 22.7.11.220.472
1oi9N20Cyclin-dependent kinase 22.7.11.220.472
1pyePM1Cyclin-dependent kinase 22.7.11.220.471
2bheBRYCyclin-dependent kinase 22.7.11.220.471
3lfqA28Cyclin-dependent kinase 22.7.11.220.471
3r7eX88Cyclin-dependent kinase 22.7.11.220.471
3r83Z14Cyclin-dependent kinase 22.7.11.220.471
1w0xOLOCyclin-dependent kinase 22.7.11.220.470
2b55D31Cyclin-dependent kinase 22.7.11.220.469
2c6tDT5Cyclin-dependent kinase 22.7.11.220.469
3r9oZ71Cyclin-dependent kinase 22.7.11.220.469
1aq1STUCyclin-dependent kinase 22.7.11.220.468
1ckpPVBCyclin-dependent kinase 22.7.11.220.468
2c6lDT4Cyclin-dependent kinase 22.7.11.220.468
2duv371Cyclin-dependent kinase 22.7.11.220.468
2r3kSCQCyclin-dependent kinase 22.7.11.220.468
3qqhX0ACyclin-dependent kinase 22.7.11.220.467
3r7iX9ICyclin-dependent kinase 22.7.11.220.467
2r3gSC9Cyclin-dependent kinase 22.7.11.220.466
3qwjX6ACyclin-dependent kinase 22.7.11.220.466
4bcmT7ZCyclin-dependent kinase 22.7.11.220.466
3rahO1ZCyclin-dependent kinase 22.7.11.220.465
4bcnT9NCyclin-dependent kinase 22.7.11.220.465
1gii1PUCyclin-dependent kinase 22.7.11.220.464
1oiuN76Cyclin-dependent kinase 22.7.11.220.464
4ez50RSCyclin-dependent kinase 62.7.11.220.464
1ke8LS4Cyclin-dependent kinase 22.7.11.220.463
2r3jSCJCyclin-dependent kinase 22.7.11.220.463
1ke9LS5Cyclin-dependent kinase 22.7.11.220.462
1r78FMDCyclin-dependent kinase 22.7.11.220.462
3le62BZCyclin-dependent kinase 22.7.11.220.461
3ti1B49Cyclin-dependent kinase 22.7.11.220.461
2c6kDT2Cyclin-dependent kinase 22.7.11.220.459
3r7uX96Cyclin-dependent kinase 22.7.11.220.459
4fki09KCyclin-dependent kinase 22.7.11.220.459
3fz1B98Cyclin-dependent kinase 22.7.11.220.458
3ql8X01Cyclin-dependent kinase 22.7.11.220.458
2r3p3SCCyclin-dependent kinase 22.7.11.220.457
3r8uZ31Cyclin-dependent kinase 22.7.11.220.456
2b54D05Cyclin-dependent kinase 22.7.11.220.455
3qwkX62Cyclin-dependent kinase 22.7.11.220.455
4eos1ROCyclin-dependent kinase 22.7.11.220.455
1h1pCMGCyclin-dependent kinase 22.7.11.220.454
2uznC96Cyclin-dependent kinase 22.7.11.220.454
4kikKSAInhibitor of nuclear factor kappa-B kinase subunit beta2.7.11.100.454
1oiqHDUCyclin-dependent kinase 22.7.11.220.453
3qziX72Cyclin-dependent kinase 22.7.11.220.453
2c6mDT5Cyclin-dependent kinase 22.7.11.220.451
3o0g3O0Cyclin-dependent-like kinase 52.7.11.10.451
3pxyJWSCyclin-dependent kinase 22.7.11.220.451
2c69CT8Cyclin-dependent kinase 22.7.11.220.450
3i4bZ48Glycogen synthase kinase-3 beta2.7.11.260.450
3r9nZ68Cyclin-dependent kinase 22.7.11.220.450
4hge15VTyrosine-protein kinase JAK2/0.450
2a4lRRCCyclin-dependent kinase 22.7.11.220.449
3iggEFQCyclin-dependent kinase 22.7.11.220.449
1gij2PUCyclin-dependent kinase 22.7.11.220.448
2r3mSCXCyclin-dependent kinase 22.7.11.220.448
2vtsLZCCyclin-dependent kinase 22.7.11.220.447
1pkdUCNCyclin-dependent kinase 22.7.11.220.446
1unlRRCCyclin-dependent-like kinase 52.7.11.10.446
4eon1ROCyclin-dependent kinase 22.7.11.220.446
4qmpDKISerine/threonine-protein kinase 242.7.11.10.446
3rzb02ZCyclin-dependent kinase 22.7.11.220.445
3tiz3TICyclin-dependent kinase 22.7.11.220.445
4kd11QKCyclin-dependent kinase 22.7.11.220.445
1e1xNW1Cyclin-dependent kinase 22.7.11.220.444
2vthLZ2Cyclin-dependent kinase 22.7.11.220.444
3rpy27ZCyclin-dependent kinase 22.7.11.220.443
4eok4SPCyclin-dependent kinase 22.7.11.220.443
1e9hINRCyclin-dependent kinase 22.7.11.220.442
1oirHDYCyclin-dependent kinase 22.7.11.220.442
3rpr25ZCyclin-dependent kinase 22.7.11.220.441
4eol1ROCyclin-dependent kinase 22.7.11.220.441
2iw6QQ2Cyclin-dependent kinase 22.7.11.220.440
2wihP48Cyclin-dependent kinase 22.7.11.220.440
3lfsA07Cyclin-dependent kinase 22.7.11.220.440