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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3qqhX0ACyclin-dependent kinase 22.7.11.22

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3qqhX0ACyclin-dependent kinase 22.7.11.221.000
4acm7YGCyclin-dependent kinase 22.7.11.220.558
3qtrX36Cyclin-dependent kinase 22.7.11.220.554
2a0cCK9Cyclin-dependent kinase 22.7.11.220.553
1pxmCK5Cyclin-dependent kinase 22.7.11.220.551
3pxyJWSCyclin-dependent kinase 22.7.11.220.551
4ek816KCyclin-dependent kinase 22.7.11.220.550
2r3lSCWCyclin-dependent kinase 22.7.11.220.549
2r3kSCQCyclin-dependent kinase 22.7.11.220.543
2r3jSCJCyclin-dependent kinase 22.7.11.220.541
2w1hL0FCyclin-dependent kinase 22.7.11.220.540
3lfnA27Cyclin-dependent kinase 22.7.11.220.538
3ti1B49Cyclin-dependent kinase 22.7.11.220.528
1g5sI17Cyclin-dependent kinase 22.7.11.220.527
2c6o4SPCyclin-dependent kinase 22.7.11.220.527
1w0xOLOCyclin-dependent kinase 22.7.11.220.526
4bgh3I6Cyclin-dependent kinase 22.7.11.220.526
3r8vZ62Cyclin-dependent kinase 22.7.11.220.525
3r9dX6BCyclin-dependent kinase 22.7.11.220.524
3iggEFQCyclin-dependent kinase 22.7.11.220.522
4fko20KCyclin-dependent kinase 22.7.11.220.522
1pxlCK4Cyclin-dependent kinase 22.7.11.220.521
2r3iSCFCyclin-dependent kinase 22.7.11.220.521
3rjc06ZCyclin-dependent kinase 22.7.11.220.517
1oitHDTCyclin-dependent kinase 22.7.11.220.516
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.516
3s1h56ZCyclin-dependent kinase 22.7.11.220.515
3qtuX44Cyclin-dependent kinase 22.7.11.220.513
3qtxX43Cyclin-dependent kinase 22.7.11.220.513
4fkr45KCyclin-dependent kinase 22.7.11.220.513
3rni21ZCyclin-dependent kinase 22.7.11.220.511
1h1r6CPCyclin-dependent kinase 22.7.11.220.510
2uznC96Cyclin-dependent kinase 22.7.11.220.510
2r3gSC9Cyclin-dependent kinase 22.7.11.220.509
2j9mPY8Cyclin-dependent kinase 22.7.11.220.508
3lfqA28Cyclin-dependent kinase 22.7.11.220.508
3unk0BYCyclin-dependent kinase 22.7.11.220.508
2c6iDT1Cyclin-dependent kinase 22.7.11.220.506
2r64740Cyclin-dependent kinase 22.7.11.220.506
3rk507ZCyclin-dependent kinase 22.7.11.220.505
2uzoC62Cyclin-dependent kinase 22.7.11.220.504
1y91CT9Cyclin-dependent kinase 22.7.11.220.501
3rmf20ZCyclin-dependent kinase 22.7.11.220.501
3rpo24ZCyclin-dependent kinase 22.7.11.220.500
3sw418KCyclin-dependent kinase 22.7.11.220.500
1h0vUN4Cyclin-dependent kinase 22.7.11.220.499
3rm618ZCyclin-dependent kinase 22.7.11.220.499
3rpv26ZCyclin-dependent kinase 22.7.11.220.499
4fkv61KCyclin-dependent kinase 22.7.11.220.499
3r83Z14Cyclin-dependent kinase 22.7.11.220.498
3r8lZ30Cyclin-dependent kinase 22.7.11.220.498
1pxkCK3Cyclin-dependent kinase 22.7.11.220.497
2w06FRVCyclin-dependent kinase 22.7.11.220.497
3qx2X63Cyclin-dependent kinase 22.7.11.220.497
1h1pCMGCyclin-dependent kinase 22.7.11.220.496
2r3p3SCCyclin-dependent kinase 22.7.11.220.495
4fks46KCyclin-dependent kinase 22.7.11.220.494
3qwjX6ACyclin-dependent kinase 22.7.11.220.493
3s2pPMUCyclin-dependent kinase 22.7.11.220.493
1gih1PUCyclin-dependent kinase 22.7.11.220.492
2xmyCDKCyclin-dependent kinase 22.7.11.220.492
1v1k3FPCyclin-dependent kinase 22.7.11.220.491
2a4lRRCCyclin-dependent kinase 22.7.11.220.491
4lyn1YGCyclin-dependent kinase 22.7.11.220.491
3sw719KCyclin-dependent kinase 22.7.11.220.490
4fkq42KCyclin-dependent kinase 22.7.11.220.490
1p2a5BNCyclin-dependent kinase 22.7.11.220.488
1pxpCK8Cyclin-dependent kinase 22.7.11.220.488
3qzgX67Cyclin-dependent kinase 22.7.11.220.487
1di8DTQCyclin-dependent kinase 22.7.11.220.486
2b52D42Cyclin-dependent kinase 22.7.11.220.486
2vv9IM9Cyclin-dependent kinase 22.7.11.220.486
3s0o50ZCyclin-dependent kinase 22.7.11.220.486
2r3mSCXCyclin-dependent kinase 22.7.11.220.485
4erwSTUCyclin-dependent kinase 22.7.11.220.485
3lfsA07Cyclin-dependent kinase 22.7.11.220.484
3rm719ZCyclin-dependent kinase 22.7.11.220.484
3s00Z60Cyclin-dependent kinase 22.7.11.220.484
4fkw62KCyclin-dependent kinase 22.7.11.220.484
1urwI1PCyclin-dependent kinase 22.7.11.220.483
3rk909ZCyclin-dependent kinase 22.7.11.220.483
1h1q2A6Cyclin-dependent kinase 22.7.11.220.482
3qu0X40Cyclin-dependent kinase 22.7.11.220.482
1ke7LS3Cyclin-dependent kinase 22.7.11.220.481
3r6xX84Cyclin-dependent kinase 22.7.11.220.480
1fvt106Cyclin-dependent kinase 22.7.11.220.479
2b55D31Cyclin-dependent kinase 22.7.11.220.479
3r7iX9ICyclin-dependent kinase 22.7.11.220.479
1w8cN69Cyclin-dependent kinase 22.7.11.220.478
3ral04ZCyclin-dependent kinase 22.7.11.220.478
2b54D05Cyclin-dependent kinase 22.7.11.220.477
3qtzX42Cyclin-dependent kinase 22.7.11.220.476
3sqq99ZCyclin-dependent kinase 22.7.11.220.476
1gii1PUCyclin-dependent kinase 22.7.11.220.475
2vttLZDCyclin-dependent kinase 22.7.11.220.475
4fkpLS5Cyclin-dependent kinase 22.7.11.220.475
3rkb12ZCyclin-dependent kinase 22.7.11.220.474
1oiuN76Cyclin-dependent kinase 22.7.11.220.472
3qxoX65Cyclin-dependent kinase 22.7.11.220.471
3ddqRRCCyclin-dependent kinase 22.7.11.220.470
3ezvEZVCyclin-dependent kinase 22.7.11.220.469
3r7uX96Cyclin-dependent kinase 22.7.11.220.469
1ke6LS2Cyclin-dependent kinase 22.7.11.220.468
3qzhX69Cyclin-dependent kinase 22.7.11.220.468
3r28XA0Cyclin-dependent kinase 22.7.11.220.468
3raiX85Cyclin-dependent kinase 22.7.11.220.468
1e1xNW1Cyclin-dependent kinase 22.7.11.220.467
3rak03ZCyclin-dependent kinase 22.7.11.220.467
1pxoCK7Cyclin-dependent kinase 22.7.11.220.466
2c5yMTWCyclin-dependent kinase 22.7.11.220.466
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.466
3fz1B98Cyclin-dependent kinase 22.7.11.220.466
3r7vZ02Cyclin-dependent kinase 22.7.11.220.466
1h0w207Cyclin-dependent kinase 22.7.11.220.465
3le62BZCyclin-dependent kinase 22.7.11.220.465
3r73X87Cyclin-dependent kinase 22.7.11.220.465
3r7yZ04Cyclin-dependent kinase 22.7.11.220.465
3rahO1ZCyclin-dependent kinase 22.7.11.220.465
4fkt48KCyclin-dependent kinase 22.7.11.220.465
1ykr628Cyclin-dependent kinase 22.7.11.220.464
2vtjLZ4Cyclin-dependent kinase 22.7.11.220.464
3py0SU9Cyclin-dependent kinase 22.7.11.220.464
1hckATPCyclin-dependent kinase 22.7.11.220.463
2r3fSC8Cyclin-dependent kinase 22.7.11.220.462
3pj8404Cyclin-dependent kinase 22.7.11.220.462
3roy22ZCyclin-dependent kinase 22.7.11.220.462
2r3r6SCCyclin-dependent kinase 22.7.11.220.461
3ddpRC8Cyclin-dependent kinase 22.7.11.220.461
4kd11QKCyclin-dependent kinase 22.7.11.220.461
3r1yX76Cyclin-dependent kinase 22.7.11.220.460
2duv371Cyclin-dependent kinase 22.7.11.220.459
3qqlX03Cyclin-dependent kinase 22.7.11.220.459
3qziX72Cyclin-dependent kinase 22.7.11.220.458
2r3o2SCCyclin-dependent kinase 22.7.11.220.457
2exmZIPCyclin-dependent kinase 22.7.11.220.456
1ke9LS5Cyclin-dependent kinase 22.7.11.220.454
4ek610KCyclin-dependent kinase 22.7.11.220.454
2nrySTUInterleukin-1 receptor-associated kinase 42.7.11.10.453
2vtsLZCCyclin-dependent kinase 22.7.11.220.453
2wpa889Cyclin-dependent kinase 22.7.11.220.453
3rk708ZCyclin-dependent kinase 22.7.11.220.453
4fklCK2Cyclin-dependent kinase 22.7.11.220.453
1h1s4SPCyclin-dependent kinase 22.7.11.220.452
3ezrEZRCyclin-dependent kinase 22.7.11.220.452
3qwkX62Cyclin-dependent kinase 22.7.11.220.452
3rpr25ZCyclin-dependent kinase 22.7.11.220.452
3sheI85MAP kinase-activated protein kinase 32.7.11.10.452
4eon1ROCyclin-dependent kinase 22.7.11.220.452
1oguST8Cyclin-dependent kinase 22.7.11.220.451
2fvdLIACyclin-dependent kinase 22.7.11.220.451
3sayOFTGlycogen synthase kinase-3 beta2.7.11.260.451
3wblPDYCyclin-dependent kinase 22.7.11.220.451
1ke5LS1Cyclin-dependent kinase 22.7.11.220.450
2c6tDT5Cyclin-dependent kinase 22.7.11.220.450
3unj0BXCyclin-dependent kinase 22.7.11.220.450
4bcpT3CCyclin-dependent kinase 22.7.11.220.450
1vyw292Cyclin-dependent kinase 22.7.11.220.449
2w05FRTCyclin-dependent kinase 22.7.11.220.449
3v5l0G1Tyrosine-protein kinase ITK/TSK2.7.10.20.449
1pyePM1Cyclin-dependent kinase 22.7.11.220.448
3ig7EFPCyclin-dependent kinase 22.7.11.220.448
3qtsX46Cyclin-dependent kinase 22.7.11.220.448
1ckpPVBCyclin-dependent kinase 22.7.11.220.447
3qtqX35Cyclin-dependent kinase 22.7.11.220.447
2bhhRYUCyclin-dependent kinase 22.7.11.220.446
2vz6FEFCalcium/calmodulin-dependent protein kinase type II subunit alpha2.7.11.170.446
1oi9N20Cyclin-dependent kinase 22.7.11.220.445
2bheBRYCyclin-dependent kinase 22.7.11.220.445
2vtnLZ7Cyclin-dependent kinase 22.7.11.220.445
3r1qX75Cyclin-dependent kinase 22.7.11.220.445
4fkj11KCyclin-dependent kinase 22.7.11.220.445
4nifANPMitogen-activated protein kinase 12.7.11.240.445
3r9oZ71Cyclin-dependent kinase 22.7.11.220.444
3r71X86Cyclin-dependent kinase 22.7.11.220.443
1b39ATPCyclin-dependent kinase 22.7.11.220.442
4gih0X5Non-receptor tyrosine-protein kinase TYK22.7.10.20.442
2xnbY8LCyclin-dependent kinase 22.7.11.220.441
3r9hZ67Cyclin-dependent kinase 22.7.11.220.441
2b53D23Cyclin-dependent kinase 22.7.11.220.440
3r9nZ68Cyclin-dependent kinase 22.7.11.220.440
4ez30S0Cyclin-dependent kinase 22.7.11.220.440