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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2w06FRVCyclin-dependent kinase 22.7.11.22

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2w06FRVCyclin-dependent kinase 22.7.11.221.000
3sw418KCyclin-dependent kinase 22.7.11.220.578
4acm7YGCyclin-dependent kinase 22.7.11.220.577
3rmf20ZCyclin-dependent kinase 22.7.11.220.572
3ral04ZCyclin-dependent kinase 22.7.11.220.565
4fkr45KCyclin-dependent kinase 22.7.11.220.556
1pxmCK5Cyclin-dependent kinase 22.7.11.220.552
2r3lSCWCyclin-dependent kinase 22.7.11.220.551
3ezvEZVCyclin-dependent kinase 22.7.11.220.549
3qtzX42Cyclin-dependent kinase 22.7.11.220.547
3qtxX43Cyclin-dependent kinase 22.7.11.220.546
3rak03ZCyclin-dependent kinase 22.7.11.220.546
2a0cCK9Cyclin-dependent kinase 22.7.11.220.544
3qu0X40Cyclin-dependent kinase 22.7.11.220.544
3r9dX6BCyclin-dependent kinase 22.7.11.220.544
3s1h56ZCyclin-dependent kinase 22.7.11.220.543
4fkq42KCyclin-dependent kinase 22.7.11.220.543
3qzgX67Cyclin-dependent kinase 22.7.11.220.541
1ke6LS2Cyclin-dependent kinase 22.7.11.220.539
2c6o4SPCyclin-dependent kinase 22.7.11.220.539
3ig7EFPCyclin-dependent kinase 22.7.11.220.539
3r7yZ04Cyclin-dependent kinase 22.7.11.220.537
3r8lZ30Cyclin-dependent kinase 22.7.11.220.537
3lfnA27Cyclin-dependent kinase 22.7.11.220.536
3sqq99ZCyclin-dependent kinase 22.7.11.220.536
3qzhX69Cyclin-dependent kinase 22.7.11.220.534
3qxoX65Cyclin-dependent kinase 22.7.11.220.532
1urwI1PCyclin-dependent kinase 22.7.11.220.530
3rk708ZCyclin-dependent kinase 22.7.11.220.530
2r64740Cyclin-dependent kinase 22.7.11.220.529
3rk507ZCyclin-dependent kinase 22.7.11.220.529
3s0o50ZCyclin-dependent kinase 22.7.11.220.528
3unk0BYCyclin-dependent kinase 22.7.11.220.527
1oirHDYCyclin-dependent kinase 22.7.11.220.526
4fkv61KCyclin-dependent kinase 22.7.11.220.526
2b53D23Cyclin-dependent kinase 22.7.11.220.525
2fvdLIACyclin-dependent kinase 22.7.11.220.525
4fko20KCyclin-dependent kinase 22.7.11.220.524
1oiyN41Cyclin-dependent kinase 22.7.11.220.523
3iggEFQCyclin-dependent kinase 22.7.11.220.522
1oi9N20Cyclin-dependent kinase 22.7.11.220.521
3pj8404Cyclin-dependent kinase 22.7.11.220.520
3r83Z14Cyclin-dependent kinase 22.7.11.220.520
3qtuX44Cyclin-dependent kinase 22.7.11.220.519
2r3kSCQCyclin-dependent kinase 22.7.11.220.518
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.518
3rni21ZCyclin-dependent kinase 22.7.11.220.517
1ke7LS3Cyclin-dependent kinase 22.7.11.220.516
4fkt48KCyclin-dependent kinase 22.7.11.220.516
4ek816KCyclin-dependent kinase 22.7.11.220.515
3s2pPMUCyclin-dependent kinase 22.7.11.220.514
3sw719KCyclin-dependent kinase 22.7.11.220.514
3rjc06ZCyclin-dependent kinase 22.7.11.220.512
1v1k3FPCyclin-dependent kinase 22.7.11.220.511
3unj0BXCyclin-dependent kinase 22.7.11.220.511
1w0xOLOCyclin-dependent kinase 22.7.11.220.510
1y91CT9Cyclin-dependent kinase 22.7.11.220.510
2iw84SPCyclin-dependent kinase 22.7.11.220.509
3qqfX07Cyclin-dependent kinase 22.7.11.220.509
3r1sX73Cyclin-dependent kinase 22.7.11.220.509
3rm719ZCyclin-dependent kinase 22.7.11.220.509
3roy22ZCyclin-dependent kinase 22.7.11.220.509
1p2a5BNCyclin-dependent kinase 22.7.11.220.508
3r7iX9ICyclin-dependent kinase 22.7.11.220.508
1gih1PUCyclin-dependent kinase 22.7.11.220.507
2btsU32Cyclin-dependent kinase 22.7.11.220.506
2w1hL0FCyclin-dependent kinase 22.7.11.220.506
3rpv26ZCyclin-dependent kinase 22.7.11.220.506
2uzoC62Cyclin-dependent kinase 22.7.11.220.504
3dogNNNCyclin-dependent kinase 22.7.11.220.504
1gii1PUCyclin-dependent kinase 22.7.11.220.503
3r7uX96Cyclin-dependent kinase 22.7.11.220.502
4fkj11KCyclin-dependent kinase 22.7.11.220.502
1oguST8Cyclin-dependent kinase 22.7.11.220.501
1ykr628Cyclin-dependent kinase 22.7.11.220.501
4fkw62KCyclin-dependent kinase 22.7.11.220.501
2r3p3SCCyclin-dependent kinase 22.7.11.220.500
3r73X87Cyclin-dependent kinase 22.7.11.220.500
3qxpX64Cyclin-dependent kinase 22.7.11.220.499
1h1r6CPCyclin-dependent kinase 22.7.11.220.498
4bgh3I6Cyclin-dependent kinase 22.7.11.220.498
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.497
2w17I19Cyclin-dependent kinase 22.7.11.220.497
2xmyCDKCyclin-dependent kinase 22.7.11.220.497
3r9hZ67Cyclin-dependent kinase 22.7.11.220.497
3qruX19Cyclin-dependent kinase 22.7.11.220.496
3rk909ZCyclin-dependent kinase 22.7.11.220.495
3ddpRC8Cyclin-dependent kinase 22.7.11.220.493
3r7vZ02Cyclin-dependent kinase 22.7.11.220.493
3wblPDYCyclin-dependent kinase 22.7.11.220.493
3r28XA0Cyclin-dependent kinase 22.7.11.220.492
1h0w207Cyclin-dependent kinase 22.7.11.220.490
3raiX85Cyclin-dependent kinase 22.7.11.220.490
3ezrEZRCyclin-dependent kinase 22.7.11.220.489
3lfqA28Cyclin-dependent kinase 22.7.11.220.489
1fvt106Cyclin-dependent kinase 22.7.11.220.488
1oitHDTCyclin-dependent kinase 22.7.11.220.488
2vttLZDCyclin-dependent kinase 22.7.11.220.488
2w05FRTCyclin-dependent kinase 22.7.11.220.488
3r6xX84Cyclin-dependent kinase 22.7.11.220.488
1pxlCK4Cyclin-dependent kinase 22.7.11.220.487
1di8DTQCyclin-dependent kinase 22.7.11.220.486
2r3jSCJCyclin-dependent kinase 22.7.11.220.486
1aq1STUCyclin-dependent kinase 22.7.11.220.485
3rpo24ZCyclin-dependent kinase 22.7.11.220.485
3qqlX03Cyclin-dependent kinase 22.7.11.220.484
2a4lRRCCyclin-dependent kinase 22.7.11.220.482
1pxpCK8Cyclin-dependent kinase 22.7.11.220.481
2r3mSCXCyclin-dependent kinase 22.7.11.220.481
2bhhRYUCyclin-dependent kinase 22.7.11.220.480
2iw94SPCyclin-dependent kinase 22.7.11.220.480
3r8vZ62Cyclin-dependent kinase 22.7.11.220.480
1h1s4SPCyclin-dependent kinase 22.7.11.220.479
3rahO1ZCyclin-dependent kinase 22.7.11.220.479
1g5sI17Cyclin-dependent kinase 22.7.11.220.478
3r71X86Cyclin-dependent kinase 22.7.11.220.478
1ke5LS1Cyclin-dependent kinase 22.7.11.220.477
2vu3LZECyclin-dependent kinase 22.7.11.220.477
3ddqRRCCyclin-dependent kinase 22.7.11.220.477
3ti1B49Cyclin-dependent kinase 22.7.11.220.476
2duv371Cyclin-dependent kinase 22.7.11.220.475
4fks46KCyclin-dependent kinase 22.7.11.220.475
1w8cN69Cyclin-dependent kinase 22.7.11.220.474
4fkpLS5Cyclin-dependent kinase 22.7.11.220.474
4lyn1YGCyclin-dependent kinase 22.7.11.220.474
1ke8LS4Cyclin-dependent kinase 22.7.11.220.473
3qqkX02Cyclin-dependent kinase 22.7.11.220.473
3rm618ZCyclin-dependent kinase 22.7.11.220.473
3qx2X63Cyclin-dependent kinase 22.7.11.220.472
2b55D31Cyclin-dependent kinase 22.7.11.220.471
3rkb12ZCyclin-dependent kinase 22.7.11.220.471
2uznC96Cyclin-dependent kinase 22.7.11.220.470
2vtjLZ4Cyclin-dependent kinase 22.7.11.220.470
3r1qX75Cyclin-dependent kinase 22.7.11.220.470
4eor4SPCyclin-dependent kinase 22.7.11.220.470
1unlRRCCyclin-dependent-like kinase 52.7.11.10.469
3qtrX36Cyclin-dependent kinase 22.7.11.220.469
1vyw292Cyclin-dependent kinase 22.7.11.220.468
2j9mPY8Cyclin-dependent kinase 22.7.11.220.468
2vtiLZ3Cyclin-dependent kinase 22.7.11.220.467
3qwjX6ACyclin-dependent kinase 22.7.11.220.467
4ez30S0Cyclin-dependent kinase 22.7.11.220.467
4fkg4CKCyclin-dependent kinase 22.7.11.220.465
2c6iDT1Cyclin-dependent kinase 22.7.11.220.463
2btrU73Cyclin-dependent kinase 22.7.11.220.462
3le62BZCyclin-dependent kinase 22.7.11.220.462
3r7eX88Cyclin-dependent kinase 22.7.11.220.462
3uli1N3Cyclin-dependent kinase 22.7.11.220.462
2c5yMTWCyclin-dependent kinase 22.7.11.220.461
2vv9IM9Cyclin-dependent kinase 22.7.11.220.461
3ql8X01Cyclin-dependent kinase 22.7.11.220.461
4fx360KCyclin-dependent kinase 22.7.11.220.461
2c6lDT4Cyclin-dependent kinase 22.7.11.220.460
3r9nZ68Cyclin-dependent kinase 22.7.11.220.460
3rpy27ZCyclin-dependent kinase 22.7.11.220.459
1oiqHDUCyclin-dependent kinase 22.7.11.220.458
1oiuN76Cyclin-dependent kinase 22.7.11.220.458
2wxvWXVCyclin-dependent kinase 22.7.11.220.457
1ke9LS5Cyclin-dependent kinase 22.7.11.220.456
3py0SU9Cyclin-dependent kinase 22.7.11.220.456
2wpa889Cyclin-dependent kinase 22.7.11.220.455
3qqhX0ACyclin-dependent kinase 22.7.11.220.454
3r9oZ71Cyclin-dependent kinase 22.7.11.220.454
2bheBRYCyclin-dependent kinase 22.7.11.220.452
2r3iSCFCyclin-dependent kinase 22.7.11.220.452
3lfsA07Cyclin-dependent kinase 22.7.11.220.452
3tiz3TICyclin-dependent kinase 22.7.11.220.452
1vyzN5BCyclin-dependent kinase 22.7.11.220.449
4qmpDKISerine/threonine-protein kinase 242.7.11.10.449
1fvv107Cyclin-dependent kinase 22.7.11.220.448
4bcpT3CCyclin-dependent kinase 22.7.11.220.448
2c6kDT2Cyclin-dependent kinase 22.7.11.220.447
3r8pZ46Cyclin-dependent kinase 22.7.11.220.447
4fki09KCyclin-dependent kinase 22.7.11.220.447
1ckpPVBCyclin-dependent kinase 22.7.11.220.446
3qziX72Cyclin-dependent kinase 22.7.11.220.446
3r8zZ63Cyclin-dependent kinase 22.7.11.220.446
4eon1ROCyclin-dependent kinase 22.7.11.220.446
4kd11QKCyclin-dependent kinase 22.7.11.220.445
2vthLZ2Cyclin-dependent kinase 22.7.11.220.443
1e1xNW1Cyclin-dependent kinase 22.7.11.220.442
2c5nCK8Cyclin-dependent kinase 22.7.11.220.441
3r1yX76Cyclin-dependent kinase 22.7.11.220.441