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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4gabFIDAldo-keto reductase family 1 member B101.1.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
4gabFIDAldo-keto reductase family 1 member B101.1.11.000
2nvcITAAldose reductase1.1.1.210.628
1ef3FIDAldose reductase1.1.1.210.618
1ekoI84Aldose reductase1.1.1.210.612
1pwmFIDAldose reductase1.1.1.210.610
2pdyFIDAldose reductase1.1.1.210.604
3p2vDOYAldose reductase1.1.1.210.604
2f2kTGGAldose reductase1.1.1.210.603
2pdwFIDAldose reductase1.1.1.210.603
3s3gTLTAldose reductase1.1.1.210.591
3u2cSUZAldose reductase1.1.1.210.587
2is72CLAldose reductase1.1.1.210.578
1ah0SBIAldose reductase1.1.1.210.577
2pd9FIDAldose reductase1.1.1.210.575
2pdkSBIAldose reductase1.1.1.210.570
3v35NTIAldose reductase1.1.1.210.553
2hvoZSTAldose reductase1.1.1.210.552
2pdj393Aldose reductase1.1.1.210.552
2hvnZSTAldose reductase1.1.1.210.549
4wevSUZAldo-keto reductase family 1 member B101.1.10.545
2inzOHPAldose reductase1.1.1.210.543
1el3I84Aldose reductase1.1.1.210.540
2agtFIDAldose reductase1.1.1.210.536
5liu388Aldo-keto reductase family 1 member B101.1.10.534
1zuaTOLAldo-keto reductase family 1 member B101.1.10.530
2pdlTOLAldose reductase1.1.1.210.522
4gts7TPGeranylgeranyl transferase type-2 subunit beta2.5.1.600.511
2fz8ZSTAldose reductase1.1.1.210.510
2iqdLPAAldose reductase1.1.1.210.506
1hfrMOTDihydrofolate reductase1.5.1.30.505
4ga8SBIAldo-keto reductase family 1 member B101.1.10.502
2fzbTOLAldose reductase1.1.1.210.501
2pdu393Aldose reductase1.1.1.210.492
4m6kFOLDihydrofolate reductase1.5.1.30.490
1xf0ASDAldo-keto reductase family 1 member C3/0.489
3v94WYQPhosphodiesterase/0.488
2vrjNCWBeta-glucosidase A3.2.1.210.487
3h4gFIDAlcohol dehydrogenase [NADP(+)]1.1.1.20.487
4jln18VDeoxycytidine kinase2.7.1.740.482
2fzdTOLAldose reductase1.1.1.210.481
2ycxP32Beta-1 adrenergic receptor/0.480
2ikj393Aldose reductase1.1.1.210.479
4u140HKMuscarinic acetylcholine receptor M3/0.479
2pb1NFGGlucan 1,3-beta-glucosidase/0.478
2yneYNEGlycylpeptide N-tetradecanoyltransferase/0.477
3ppkFNISerine/threonine-protein kinase B-raf2.7.11.10.477
1sg0STLRibosyldihydronicotinamide dehydrogenase [quinone]/0.476
2pzn393Aldose reductase1.1.1.210.475
3hxcBD6Geranylgeranyl transferase type-2 subunit beta2.5.1.600.475
4b13X25Glycylpeptide N-tetradecanoyltransferase/0.475
4bbhYBNGlycylpeptide N-tetradecanoyltransferase/0.473
2bjsACVIsopenicillin N synthase1.21.3.10.472
3pz3PZ3Geranylgeranyl transferase type-2 subunit beta2.5.1.600.472
4gca2X9Aldose reductase1.1.1.210.472
1ejbINJ6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.471
1zq5E04Aldo-keto reductase family 1 member C3/0.471
3cr0809Wee1-like protein kinase2.7.10.20.471
3rl45GPMetallophosphoesterase MPPED23.10.471
4fam0SZAldo-keto reductase family 1 member C3/0.470
4pabTHGDimethylglycine dehydrogenase, mitochondrial1.5.8.40.470
3bv7NAP3-oxo-5-beta-steroid 4-dehydrogenase/0.469
3m64393Aldose reductase1.1.1.210.469
3ntz3TZDihydrofolate reductase1.5.1.30.469
1ry0PG2Aldo-keto reductase family 1 member C3/0.468
1z3n3NAAldose reductase1.1.1.210.468
3hxdBD7Geranylgeranyl transferase type-2 subunit beta2.5.1.600.468
4dbuBT9Aldo-keto reductase family 1 member C3/0.468
2d06ESTSulfotransferase 1A12.8.2.10.467
2pdc393Aldose reductase1.1.1.210.467
3g5eQ74Aldose reductase1.1.1.210.467
3lz5LDTAldose reductase1.1.1.210.467
4bfwZVWPantothenate kinase2.7.1.330.467
3geyP34Poly [ADP-ribose] polymerase 152.4.2.300.466
4b12C23Glycylpeptide N-tetradecanoyltransferase/0.466
2pdxZSTAldose reductase1.1.1.210.465
4dbs0HVAldo-keto reductase family 1 member C3/0.465
3o73O73Ribosyldihydronicotinamide dehydrogenase [quinone]/0.464
4i5xFLFAldo-keto reductase family 1 member B101.1.10.464
4nv0MG77-methylguanosine phosphate-specific 5'-nucleotidase/0.464
2f3815MAldo-keto reductase family 1 member C3/0.463
2pdn47DAldose reductase1.1.1.210.463
2vdyHCYCorticosteroid-binding globulin/0.463
4b144XBGlycylpeptide N-tetradecanoyltransferase/0.463
1kmsLIHDihydrofolate reductase1.5.1.30.462
1u70MTXDihydrofolate reductase1.5.1.30.462
2f98NGVAklanonic acid methyl ester cyclase AcmA5.5.1.230.462
2vi5Y196,7-dimethyl-8-ribityllumazine synthase2.5.1.780.462
3nhlYTRRibosyldihydronicotinamide dehydrogenase [quinone]/0.462
1h66RH1NAD(P)H dehydrogenase [quinone] 11.6.5.20.461
2dv0ZSTAldose reductase1.1.1.210.461
4b117I1Glycylpeptide N-tetradecanoyltransferase/0.461
1y2e5DEcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.460
3tfjTHGDimethylsulfonioproprionate demethylase DmdA2.1.1.2690.460
4oew5IOcGMP-specific 3',5'-cyclic phosphodiesterase/0.460
1uhoVDNcGMP-specific 3',5'-cyclic phosphodiesterase/0.459
1ut6A8NAcetylcholinesterase3.1.1.70.459
2ipiAKYAclacinomycin-N/aclacinomycin-A oxidase/0.459
3hxbBD5Geranylgeranyl transferase type-2 subunit beta2.5.1.600.459
1re0AFBADP-ribosylation factor 1/0.458
1re0AFBARF guanine-nucleotide exchange factor 1/0.458
3f3y4OABile salt sulfotransferase2.8.2.140.458
3r94FLRAldo-keto reductase family 1 member C3/0.458
1gt5BZQOdorant-binding protein/0.457
1pj6FOLDimethylglycine oxidase1.5.3.100.457
4g2yNI5cGMP-specific 3',5'-cyclic phosphodiesterase/0.457
2yczI32Beta-1 adrenergic receptor/0.457
2ycyP32Beta-1 adrenergic receptor/0.457
5d6lCAUBeta-2 adrenergic receptor/0.457
1s3uTQDDihydrofolate reductase1.5.1.30.456
3k4551PDihydrofolate reductase1.5.1.30.456
3qpoPFRcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.456
4lsaBLDProtein BRASSINOSTEROID INSENSITIVE 12.7.10.10.456
5dozNDPJamJ/0.456
1efyBZCPoly [ADP-ribose] polymerase 12.4.2.300.455
3c3dFO12-phospho-L-lactate transferase/0.455
3c72CX1Geranylgeranyl transferase type-2 subunit beta2.5.1.600.455
3kozZ97D-ornithine 4,5-aminomutase subunit beta/0.455
3u5ySCGRaucaffricine-O-beta-D-glucosidase3.2.1.1250.455
4gv4MEJPoly [ADP-ribose] polymerase 32.4.2.300.455
4hf415HcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.455
1dgfNDPCatalase1.11.1.60.454
1isgAGSADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 23.2.2.60.454
1z8962PAldose reductase1.1.1.210.454
2iki388Aldose reductase1.1.1.210.454
2xi4AFTAcetylcholinesterase3.1.1.70.454
3gsiTHGDimethylglycine oxidase1.5.3.100.454
4l5b1UXDeoxycytidine kinase2.7.1.740.454
4oex5EOcGMP-specific 3',5'-cyclic phosphodiesterase/0.454
1dlrMXADihydrofolate reductase1.5.1.30.453
1so2666cGMP-inhibited 3',5'-cyclic phosphodiesterase B3.1.4.170.453
1zgcA2EAcetylcholinesterase3.1.1.70.453
4g2wNI0cGMP-specific 3',5'-cyclic phosphodiesterase/0.453
4gtt7TQGeranylgeranyl transferase type-2 subunit beta2.5.1.600.453
1e1fPSG4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1, chloroplastic3.2.1.1820.452
1eveE20Acetylcholinesterase3.1.1.70.452
1odcA8BAcetylcholinesterase3.1.1.70.452
2xlpNAPPutative flavin-containing monooxygenase/0.452
3aezGDPPantothenate kinase2.7.1.330.452
3lenZSTAldose reductase1.1.1.210.452
3lqlLDTAldose reductase1.1.1.210.452
4gv25MEPoly [ADP-ribose] polymerase 32.4.2.300.452
4jvlESTEstrogen sulfotransferase2.8.2.40.452
4mqt2CUMuscarinic acetylcholine receptor M2/0.452
2c1zKMPAnthocyanidin 3-O-glucosyltransferase 22.4.1.1150.451
2fb8215Serine/threonine-protein kinase B-raf2.7.11.10.451
3m4h388Aldose reductase1.1.1.210.451
3qwiCUE17beta-hydroxysteroid dehydrogenase/0.451
3r8hZOMAldo-keto reductase family 1 member C3/0.451
3zkuHCVIsopenicillin N synthase1.21.3.10.451
1ohjCOPDihydrofolate reductase1.5.1.30.450
1us0LDTAldose reductase1.1.1.210.450
1y2d4DEcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.450
2a3bCFFEndochitinase B13.2.1.140.450
3oq13OQCorticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.450
4blcNDPCatalase1.11.1.60.450
4gv08MEPoly [ADP-ribose] polymerase 32.4.2.300.450
4k4eK4ETankyrase-12.4.2.300.450
4uugPXGBranched-chain amino acid aminotransferase, putative/0.450
2jgsBTNAvidin/0.449
2xltNA0Putative flavin-containing monooxygenase/0.449
3nhpHGZRibosyldihydronicotinamide dehydrogenase [quinone]/0.449
4bs4A64Tankyrase-22.4.2.300.449
4c49HCYCorticosteroid-binding globulin/0.449
4fk3325Serine/threonine-protein kinase B-raf2.7.11.10.449
4yu153NAldose reductase1.1.1.210.449
4gbrCAUBeta-2 adrenergic receptor/0.449
1dgbNDPCatalase1.11.1.60.448
1udtVIAcGMP-specific 3',5'-cyclic phosphodiesterase/0.448
1ycgFMNNitric oxide reductase10.448
2dhfDZFDihydrofolate reductase1.5.1.30.448
2i16LDTAldose reductase1.1.1.210.448
2j3qTFLAcetylcholinesterase3.1.1.70.448
2xnvVU3Soluble acetylcholine receptor/0.448
3ghwGHWDihydrofolate reductase1.5.1.30.448
3hxeBD8Geranylgeranyl transferase type-2 subunit beta2.5.1.600.448
3hxfBD9Geranylgeranyl transferase type-2 subunit beta2.5.1.600.448
3qwhKMP17beta-hydroxysteroid dehydrogenase/0.448
3sfy3FYUncharacterized protein/0.448
4fcb0T7cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.448
4ia05BBcGMP-specific 3',5'-cyclic phosphodiesterase/0.448
4kfj1R0Dihydrofolate reductase1.5.1.30.448
4kfjFOLDihydrofolate reductase1.5.1.30.448
4kxjP34Nucleoprotein/0.448
4m6l21VDihydrofolate reductase1.5.1.30.448
5f54TMPSingle-stranded-DNA-specific exonuclease/0.448
1nqvLMZ6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.447
1ry8RUTAldo-keto reductase family 1 member C3/0.447
1s7gNADNAD-dependent protein deacylase 2/0.447
2ycwCAUBeta-1 adrenergic receptor/0.447
3nhjA2ZRibosyldihydronicotinamide dehydrogenase [quinone]/0.447
3q7fED2Uncharacterized protein/0.447
4hhy15RPoly [ADP-ribose] polymerase 12.4.2.300.447
4hhz15SPoly [ADP-ribose] polymerase 12.4.2.300.447
4n1fCZHObelin/0.447
1ohkCOPDihydrofolate reductase1.5.1.30.446
1z4iUMP5'(3')-deoxyribonucleotidase, mitochondrial3.1.30.446
2fm5M99cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.446
3ggs2FDPurine nucleoside phosphorylase2.4.2.10.446
3lboLDTAldose reductase1.1.1.210.446
4u150HKMuscarinic acetylcholine receptor M3/0.446
1q0zAKAAclacinomycin methylesterase RdmC3.1.1.950.445
1u65CP0Acetylcholinesterase3.1.1.70.445
2hzqSTRApolipoprotein D/0.445
3owxXRARibosyldihydronicotinamide dehydrogenase [quinone]/0.445
3r8gIZPAldo-keto reductase family 1 member C3/0.445
4gtv7TRGeranylgeranyl transferase type-2 subunit beta2.5.1.600.445
4jvmXDIEstrogen sulfotransferase2.8.2.40.445
4kmzFOLFolate receptor beta/0.445
4nqgCZHMitrocomin/0.445
1dlsMTXDihydrofolate reductase1.5.1.30.444
1icqOPD12-oxophytodienoate reductase 11.3.1.420.444
1w4lGL8Acetylcholinesterase3.1.1.70.444
2v2qNVG4-diphosphocytidyl-2-C-methyl-D-erythritol kinase/0.444
2w6cBM4Acetylcholinesterase3.1.1.70.444
3buvNAP3-oxo-5-beta-steroid 4-dehydrogenase/0.444
3cgtBCDCyclomaltodextrin glucanotransferase2.4.1.190.444
3nhrRZWRibosyldihydronicotinamide dehydrogenase [quinone]/0.444
3vilSA0Beta-glucosidase/0.444
4l0t1V0Tankyrase-22.4.2.300.444
4l6s1WQPoly [ADP-ribose] polymerase 12.4.2.300.444
5a8eXTKBeta-1 adrenergic receptor/0.444
1pk92FAPurine nucleoside phosphorylase DeoD-type/0.443
1xomCIOcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.443
1z71L17Prothrombin3.4.21.50.443
2wzySQXSoluble acetylcholine receptor/0.443
3a1l2CCCytochrome P450/0.443
3g4gD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.443
3zpqXF5Beta-1 adrenergic receptor/0.443
4hlf15ZTankyrase-22.4.2.300.443
4li61XOTankyrase-12.4.2.300.443
4muw2F4cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.443
1hb3SCVIsopenicillin N synthase1.21.3.10.442
1z6tADPApoptotic protease-activating factor 1/0.442
2duzZSTAldose reductase1.1.1.210.442
2jl1NAPTriphenylmethane reductase/0.442
3uyk0CXProbable NDP-rhamnosyltransferase/0.442
4hlh20DTankyrase-22.4.2.300.442
4nwiCTN7-methylguanosine phosphate-specific 5'-nucleotidase/0.442
1mczRMNBenzoylformate decarboxylase4.1.1.70.441
2bzsCB1Ribosyldihydronicotinamide dehydrogenase [quinone]/0.441
2ea4F79Methionine aminopeptidase 2/0.441
2z7hGG3Geranylgeranyl pyrophosphate synthase/0.441
3g4iD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.441
3pg3DG7Mitogen-activated protein kinase 14/0.441
3t0kDCQSulfide-quinone reductase/0.441
3wavDWVEctonucleotide pyrophosphatase/phosphodiesterase family member 23.1.4.390.441
4gi2NAPCrotonyl-CoA carboxylase/reductase/0.441
4jlm1NNDeoxycytidine kinase2.7.1.740.441
4l341VGTankyrase-22.4.2.300.441
7catNDPCatalase1.11.1.60.441
1mvtDTMDihydrofolate reductase1.5.1.30.440
1nbhSAMGlycine N-methyltransferase2.1.1.200.440
1nm6L86Prothrombin3.4.21.50.440
1p33MTXPteridine reductase 11.5.1.330.440
1pqc444Oxysterols receptor LXR-beta/0.440
1zgbA1EAcetylcholinesterase3.1.1.70.440
2cekN8TAcetylcholinesterase3.1.1.70.440
2hv5ZSTAldose reductase1.1.1.210.440
2zu9GDPMannosyl-3-phosphoglycerate synthase2.4.1.2170.440
3n0hTOPDihydrofolate reductase1.5.1.30.440
3prfFP3Serine/threonine-protein kinase B-raf2.7.11.10.440
3w5eNVWcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.440
4c1iEH9cGMP-dependent 3',5'-cyclic phosphodiesterase3.1.4.170.440
4dbw511Aldo-keto reductase family 1 member C3/0.440
4tvj09LPoly [ADP-ribose] polymerase 22.4.2.300.440