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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2vtsLZCCyclin-dependent kinase 22.7.11.22

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
2vtsLZCCyclin-dependent kinase 22.7.11.221.000
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.576
1w8cN69Cyclin-dependent kinase 22.7.11.220.549
2c6lDT4Cyclin-dependent kinase 22.7.11.220.544
2r3iSCFCyclin-dependent kinase 22.7.11.220.538
1v1k3FPCyclin-dependent kinase 22.7.11.220.532
1oitHDTCyclin-dependent kinase 22.7.11.220.524
2a0cCK9Cyclin-dependent kinase 22.7.11.220.521
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.521
3rahO1ZCyclin-dependent kinase 22.7.11.220.518
3r71X86Cyclin-dependent kinase 22.7.11.220.516
3s1h56ZCyclin-dependent kinase 22.7.11.220.510
1y91CT9Cyclin-dependent kinase 22.7.11.220.503
2c6o4SPCyclin-dependent kinase 22.7.11.220.503
3r83Z14Cyclin-dependent kinase 22.7.11.220.503
3rk708ZCyclin-dependent kinase 22.7.11.220.503
3s2pPMUCyclin-dependent kinase 22.7.11.220.503
1ke7LS3Cyclin-dependent kinase 22.7.11.220.499
1pxmCK5Cyclin-dependent kinase 22.7.11.220.497
3r73X87Cyclin-dependent kinase 22.7.11.220.496
2vv9IM9Cyclin-dependent kinase 22.7.11.220.495
2c6iDT1Cyclin-dependent kinase 22.7.11.220.494
3rpo24ZCyclin-dependent kinase 22.7.11.220.493
2b52D42Cyclin-dependent kinase 22.7.11.220.491
3qx2X63Cyclin-dependent kinase 22.7.11.220.491
3rni21ZCyclin-dependent kinase 22.7.11.220.491
3rk909ZCyclin-dependent kinase 22.7.11.220.489
3sqq99ZCyclin-dependent kinase 22.7.11.220.488
2vttLZDCyclin-dependent kinase 22.7.11.220.487
4fkv61KCyclin-dependent kinase 22.7.11.220.487
2b54D05Cyclin-dependent kinase 22.7.11.220.486
2c6kDT2Cyclin-dependent kinase 22.7.11.220.486
3qxpX64Cyclin-dependent kinase 22.7.11.220.486
3rak03ZCyclin-dependent kinase 22.7.11.220.486
3rm719ZCyclin-dependent kinase 22.7.11.220.486
1gih1PUCyclin-dependent kinase 22.7.11.220.483
3r8vZ62Cyclin-dependent kinase 22.7.11.220.483
3raiX85Cyclin-dependent kinase 22.7.11.220.483
1oiqHDUCyclin-dependent kinase 22.7.11.220.481
2r3lSCWCyclin-dependent kinase 22.7.11.220.480
4fklCK2Cyclin-dependent kinase 22.7.11.220.480
2w06FRVCyclin-dependent kinase 22.7.11.220.478
4fkr45KCyclin-dependent kinase 22.7.11.220.477
4lyn1YGCyclin-dependent kinase 22.7.11.220.476
2r3gSC9Cyclin-dependent kinase 22.7.11.220.475
3qtxX43Cyclin-dependent kinase 22.7.11.220.475
3rkb12ZCyclin-dependent kinase 22.7.11.220.475
3ddqRRCCyclin-dependent kinase 22.7.11.220.474
3r9hZ67Cyclin-dependent kinase 22.7.11.220.474
1p2a5BNCyclin-dependent kinase 22.7.11.220.473
2w1hL0FCyclin-dependent kinase 22.7.11.220.473
3lfnA27Cyclin-dependent kinase 22.7.11.220.473
1h1r6CPCyclin-dependent kinase 22.7.11.220.472
2fvdLIACyclin-dependent kinase 22.7.11.220.471
2r3r6SCCyclin-dependent kinase 22.7.11.220.471
2b55D31Cyclin-dependent kinase 22.7.11.220.469
2c6mDT5Cyclin-dependent kinase 22.7.11.220.469
2uznC96Cyclin-dependent kinase 22.7.11.220.469
2a4lRRCCyclin-dependent kinase 22.7.11.220.468
4qnyANPMitogen activated protein kinase, putative/0.468
1h0w207Cyclin-dependent kinase 22.7.11.220.467
1g5sI17Cyclin-dependent kinase 22.7.11.220.466
3rjc06ZCyclin-dependent kinase 22.7.11.220.466
1aq1STUCyclin-dependent kinase 22.7.11.220.464
3qtuX44Cyclin-dependent kinase 22.7.11.220.464
3ral04ZCyclin-dependent kinase 22.7.11.220.464
1w0xOLOCyclin-dependent kinase 22.7.11.220.462
2bhhRYUCyclin-dependent kinase 22.7.11.220.462
2r3o2SCCyclin-dependent kinase 22.7.11.220.462
3r7yZ04Cyclin-dependent kinase 22.7.11.220.462
3roy22ZCyclin-dependent kinase 22.7.11.220.462
3qtrX36Cyclin-dependent kinase 22.7.11.220.460
3ti1B49Cyclin-dependent kinase 22.7.11.220.460
1oguST8Cyclin-dependent kinase 22.7.11.220.459
4bcmT7ZCyclin-dependent kinase 22.7.11.220.459
4eor4SPCyclin-dependent kinase 22.7.11.220.459
2uzoC62Cyclin-dependent kinase 22.7.11.220.458
3lfqA28Cyclin-dependent kinase 22.7.11.220.457
3r7uX96Cyclin-dependent kinase 22.7.11.220.457
3rmf20ZCyclin-dependent kinase 22.7.11.220.457
3qqfX07Cyclin-dependent kinase 22.7.11.220.456
2r64740Cyclin-dependent kinase 22.7.11.220.455
3qxoX65Cyclin-dependent kinase 22.7.11.220.455
1urwI1PCyclin-dependent kinase 22.7.11.220.454
3rpv26ZCyclin-dependent kinase 22.7.11.220.454
4erwSTUCyclin-dependent kinase 22.7.11.220.454
4fko20KCyclin-dependent kinase 22.7.11.220.454
1ykr628Cyclin-dependent kinase 22.7.11.220.453
2vthLZ2Cyclin-dependent kinase 22.7.11.220.453
3ezvEZVCyclin-dependent kinase 22.7.11.220.453
3r9nZ68Cyclin-dependent kinase 22.7.11.220.453
3rm618ZCyclin-dependent kinase 22.7.11.220.453
2vu3LZECyclin-dependent kinase 22.7.11.220.452
3qwkX62Cyclin-dependent kinase 22.7.11.220.452
4fkw62KCyclin-dependent kinase 22.7.11.220.452
2r3fSC8Cyclin-dependent kinase 22.7.11.220.451
2w17I19Cyclin-dependent kinase 22.7.11.220.451
3r1sX73Cyclin-dependent kinase 22.7.11.220.451
4ek610KCyclin-dependent kinase 22.7.11.220.451
2w05FRTCyclin-dependent kinase 22.7.11.220.449
3r6xX84Cyclin-dependent kinase 22.7.11.220.449
3wblPDYCyclin-dependent kinase 22.7.11.220.448
1h1s4SPCyclin-dependent kinase 22.7.11.220.446
3qzgX67Cyclin-dependent kinase 22.7.11.220.446
3r9dX6BCyclin-dependent kinase 22.7.11.220.446
4fkq42KCyclin-dependent kinase 22.7.11.220.446
3sw418KCyclin-dependent kinase 22.7.11.220.445
3ddpRC8Cyclin-dependent kinase 22.7.11.220.444
1gii1PUCyclin-dependent kinase 22.7.11.220.443
2vtqLZACyclin-dependent kinase 22.7.11.220.443
3qzhX69Cyclin-dependent kinase 22.7.11.220.443
3r7vZ02Cyclin-dependent kinase 22.7.11.220.443
3r8uZ31Cyclin-dependent kinase 22.7.11.220.443
4fkg4CKCyclin-dependent kinase 22.7.11.220.443
2btrU73Cyclin-dependent kinase 22.7.11.220.442
2r3jSCJCyclin-dependent kinase 22.7.11.220.442
3r7iX9ICyclin-dependent kinase 22.7.11.220.442
3qqlX03Cyclin-dependent kinase 22.7.11.220.441