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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2oscMUHAngiopoietin-1 receptor2.7.10.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
2oscMUHAngiopoietin-1 receptor2.7.10.11.000
2p4iMR9Angiopoietin-1 receptor2.7.10.10.575
2rl52RLVascular endothelial growth factor receptor 22.7.10.10.555
5bvw1N1Epithelial discoidin domain-containing receptor 12.7.10.10.526
4ckrDI1Epithelial discoidin domain-containing receptor 12.7.10.10.524
4twnB96Ephrin type-A receptor 32.7.10.10.520
3ctj320Hepatocyte growth factor receptor2.7.10.10.519
3l8sBFFMitogen-activated protein kinase 14/0.516
3lfeZ84Mitogen-activated protein kinase 14/0.516
3oezSTIProto-oncogene tyrosine-protein kinase Src2.7.10.20.514
2pl0STITyrosine-protein kinase Lck2.7.10.20.510
4c8b0LIReceptor-interacting serine/threonine-protein kinase 22.7.11.10.510
3cth319Hepatocyte growth factor receptor2.7.10.10.509
4equG6ISerine/threonine-protein kinase 102.7.11.10.509
2oh4GIGVascular endothelial growth factor receptor 22.7.10.10.506
2g2hP16Tyrosine-protein kinase ABL12.7.10.20.505
2ofv242Tyrosine-protein kinase Lck2.7.10.20.505
4v010LIFibroblast growth factor receptor 1 (Fms-related tyrosine kinase 2, Pfeiffer syndrome), isoform CRA_b/0.500
3be2RAJVascular endothelial growth factor receptor 22.7.10.10.498
4tyj0LIFibroblast growth factor receptor 42.7.10.10.496
3jsuKA5Bifunctional dihydrofolate reductase-thymidylate synthase/0.491
3vo30KFVascular endothelial growth factor receptor 22.7.10.10.489
1fp1HCCIsoliquiritigenin 2'-O-methyltransferase/0.486
2ewaSB2Mitogen-activated protein kinase 14/0.483
3dkoIHZEphrin type-A receptor 72.7.10.10.482
3vw8DF6Hepatocyte growth factor receptor2.7.10.10.482
1fduESTEstradiol 17-beta-dehydrogenase 11.1.1.620.480
1fgiSU1Fibroblast growth factor receptor 1/0.480
2bakAQZMitogen-activated protein kinase 14/0.479
4a9yAQZMitogen-activated protein kinase 14/0.479
3c3dFO12-phospho-L-lactate transferase/0.478
2fziDH3Dihydrofolate reductase1.5.1.30.476
3b8q900Vascular endothelial growth factor receptor 22.7.10.10.476
3itzP66Mitogen-activated protein kinase 14/0.476
4af3VX6Aurora kinase B2.7.11.10.475
2azzTCHPhospholipase A2, major isoenzyme3.1.1.40.473
2gqg1N1Tyrosine-protein kinase ABL12.7.10.20.472
3cqeP91Wee1-like protein kinase2.7.10.20.472
4b8mVX6Aurora kinase B-A2.7.11.10.472
4bkjSTIEpithelial discoidin domain-containing receptor 12.7.10.10.472
3hng8STVascular endothelial growth factor receptor 12.7.10.10.471
3uibSB2Putative mitogen-activated protein kinase/0.471
3c0g3AMPeripheral plasma membrane protein CASK2.7.11.10.470
1cd2FOLDihydrofolate reductase1.5.1.30.469
3qri919Tyrosine-protein kinase ABL12.7.10.20.468
5dozNDPJamJ/0.468
1q5dEPBEpothilone C/D epoxidase1.140.467
3pg3DG7Mitogen-activated protein kinase 14/0.467
1uwhBAXSerine/threonine-protein kinase B-raf2.7.11.10.466
2f4jVX6Tyrosine-protein kinase ABL12.7.10.20.466
2jj2ADPATP synthase subunit alpha, mitochondrial/0.466
2jj2ADPATP synthase subunit beta, mitochondrial3.6.3.140.466
3fknFKNMitogen-activated protein kinase 14/0.466
4gk4L90Ephrin type-A receptor 32.7.10.10.466
1uzwCDHIsopenicillin N synthase1.21.3.10.465
3b2w9NHTyrosine-protein kinase Lck2.7.10.20.465
3w5eNVWcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.465
4o4fATPKinase/0.465
2vcmM11Isopenicillin N synthase1.21.3.10.464
2xkc4VQSerine/threonine-protein kinase Nek22.7.11.10.464
2xyuQ9GEphrin type-A receptor 42.7.10.10.464
3e5aVX6Aurora kinase A2.7.11.10.464
4fk3325Serine/threonine-protein kinase B-raf2.7.11.10.464
4wevSUZAldo-keto reductase family 1 member B101.1.10.464
3a1l2CCCytochrome P450/0.463
3zsh469Mitogen-activated protein kinase 14/0.463
4at4T6EBDNF/NT-3 growth factors receptor2.7.10.10.463
3gcq1BUMitogen-activated protein kinase 14/0.462
3v94WYQPhosphodiesterase/0.462
4agwNG7Proto-oncogene tyrosine-protein kinase Src2.7.10.20.462
2yixYIXMitogen-activated protein kinase 14/0.461
1fdsESTEstradiol 17-beta-dehydrogenase 11.1.1.620.460
1ly4COQDihydrofolate reductase1.5.1.30.460
2o7pNAPRiboflavin biosynthesis protein RibD/0.460
3dgaRJ1Bifunctional dihydrofolate reductase-thymidylate synthase1.5.1.30.460
3hu2AGSTransitional endoplasmic reticulum ATPase3.6.4.60.460
2vx07X7Ephrin type-B receptor 42.7.10.10.459
3h1jSMACytochrome b/0.459
4ia1BIVVitamin D3 receptor A/0.459
3tm4SAMUncharacterized protein/0.458
4l23X6KPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform/0.458
4mv4ACPBiotin carboxylase6.3.4.140.458
3uzcT4EAdenosine receptor A2a/0.458
1e26GPBDihydrofolate reductase1.5.1.30.457
1j3iWRABifunctional dihydrofolate reductase-thymidylate synthase1.5.1.30.457
1nbmADPATP synthase subunit beta, mitochondrial3.6.3.140.457
2jc6QPPCalcium/calmodulin-dependent protein kinase type 1D2.7.11.170.457
3eta351Insulin receptor2.7.10.10.457
3zoiM2WIsopenicillin N synthase1.21.3.10.457
1o5rFR9Adenosine deaminase3.5.4.40.456
1qxoFMNChorismate synthase/0.456
2wqbQQ1Angiopoietin-1 receptor2.7.10.10.456
2xvdAS6Ephrin type-B receptor 42.7.10.10.456
2ym2NAPPhenylacetone monooxygenase1.14.13.920.456
2z2w770Wee1-like protein kinase2.7.10.20.456
3lu8IQXSerum albumin/0.456
3nga3NGCasein kinase II subunit alpha2.7.11.10.456
3tubFPUTyrosine-protein kinase SYK2.7.10.20.456
4eevL1XHepatocyte growth factor receptor2.7.10.10.456
4j6bPLOCytochrome P450 monooxygenase/0.456
4j6cSTRCytochrome P450 monooxygenase/0.456
1ouy094Mitogen-activated protein kinase 14/0.455
1w06W05Isopenicillin N synthase1.21.3.10.455
3g493G4Corticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.455
3hv3R49Mitogen-activated protein kinase 14/0.455
3iw8HIZMitogen-activated protein kinase 14/0.455
3kjsDQ1Bifunctional dihydrofolate reductase-thymidylate synthase/0.455
4qmxH8HSerine/threonine-protein kinase 242.7.11.10.455
3qakUKAAdenosine receptor A2a/0.455
2fb8215Serine/threonine-protein kinase B-raf2.7.11.10.454
2g44T3OEstrogen receptor/0.454
2qjySMACytochrome b/0.454
2wo7ASVIsopenicillin N synthase1.21.3.10.454
4jbtASDCytochrome P450 monooxygenase/0.454
2cd2FOLDihydrofolate reductase1.5.1.30.453
2z7gEH9Adenosine deaminase3.5.4.40.453
2zi53L1Deoxycytidine kinase2.7.1.740.453
3cd2MTXDihydrofolate reductase1.5.1.30.453
4dpdDHFBifunctional dihydrofolate reductase-thymidylate synthase/0.453
5ab7MLCNonspecific lipid-transfer protein, putative/0.453
1zg32HIIsoflavone 4'-O-methyltransferase/0.452
2zevB71Geranylgeranyl pyrophosphate synthase/0.452
3oom507Activin receptor type-12.7.11.300.452
3up3XCAaceDAF-12/0.452
4oew5IOcGMP-specific 3',5'-cyclic phosphodiesterase/0.452
1ci7CB3Thymidylate synthase2.1.1.450.451
1v7aFRCAdenosine deaminase3.5.4.40.451
2jb4A14Isopenicillin N synthase1.21.3.10.451
3l0lHC3Nuclear receptor ROR-gamma/0.451
3prfFP3Serine/threonine-protein kinase B-raf2.7.11.10.451
4d9fDCSD-cysteine desulfhydrase/0.451
4hle17VPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform2.7.1.1530.451
4mxxDB8Proto-oncogene tyrosine-protein kinase Src2.7.10.20.451
5dc5B3NHistone deacetylase 83.5.1.980.451
1blzACVIsopenicillin N synthase1.21.3.10.450
1w83L11Mitogen-activated protein kinase 14/0.450
2fmn4HF5,10-methylenetetrahydrofolate reductase1.5.1.200.450
2y1oT26UDP-N-acetylmuramoylalanine--D-glutamate ligase6.3.2.90.450
2z3uCRRCytochrome P450/0.450
4at0FADPossible succinate dehydrogenase/0.450
4ead0NPThymidine phosphorylase2.4.2.40.450
1ppjSMACytochrome b/0.449
3f82353Hepatocyte growth factor receptor2.7.10.10.449
3hub469Mitogen-activated protein kinase 14/0.449
3wd9QPCcAMP-specific 3',5'-cyclic phosphodiesterase 4B3.1.4.530.449
4bc6XZNSerine/threonine-protein kinase 102.7.11.10.449
4o4eATPKinase/0.449
5bp9SAHPutative methyltransferase protein/0.449
2bxoOPBSerum albumin/0.448
2weyEV1cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.448
3cjgKIMVascular endothelial growth factor receptor 22.7.10.10.448
3eel53TUncharacterized protein/0.448
3gmd2M3Corticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.448
3mcyZH1FimH/0.448
3thrC2FGlycine N-methyltransferase2.1.1.200.448
4bb3KKAIsopenicillin N synthase1.21.3.10.448
1pkfEPDEpothilone C/D epoxidase1.140.447
1udtVIAcGMP-specific 3',5'-cyclic phosphodiesterase/0.447
1upw444Oxysterols receptor LXR-beta/0.447
2i0ePDSProtein kinase C beta type2.7.11.130.447
2ow3BIMGlycogen synthase kinase-3 beta2.7.11.260.447
2qu6857Vascular endothelial growth factor receptor 22.7.10.10.447
2vwz7X6Ephrin type-B receptor 42.7.10.10.447
3w2o03PEpidermal growth factor receptor2.7.10.10.447
3reyXACAdenosine receptor A2a/0.447
1dajMOTDihydrofolate reductase1.5.1.30.446
1hb1OCVIsopenicillin N synthase1.21.3.10.446
2xszATPRuvB-like 23.6.4.120.446
3fl4FL4Mitogen-activated protein kinase 14/0.446
4ag8AXIVascular endothelial growth factor receptor 22.7.10.10.446
4hf415HcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.446
2ydvNECAdenosine receptor A2a/0.445
3cinNADMyo-inositol-1-phosphate synthase-related protein/0.445
3qlzQLZUncharacterized protein/0.445
4fhf0TTSpore photoproduct lyase/0.445
1eioGCHGastrotropin/0.444
1m52P17Tyrosine-protein kinase ABL12.7.10.20.444
2bfmTOPPteridine reductase 11.5.1.330.444
2w4qCBWProstaglandin reductase 21.3.1.480.444
2y60M8FIsopenicillin N synthase1.21.3.10.444
4iq71G9Mycocyclosin synthase1.14.21.90.444
4mvh2F5cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.444
4nks2M2Fibroblast growth factor receptor 1/0.444
4qrc0LIFibroblast growth factor receptor 42.7.10.10.444
4v26TF3[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial2.7.11.20.444
5k2cZMAAdenosine receptor A2a/0.444
1mkdZARcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.443
1s9qOHTEstrogen-related receptor gamma/0.443
1xddAAYIntegrin alpha-L/0.443
1zzlTZYMitogen-activated protein kinase 14/0.443
2bbqPFGThymidylate synthase/0.443
2ouyCMPcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.443
3ar6TG1Sarcoplasmic/endoplasmic reticulum calcium ATPase 13.6.3.80.443
3g4gD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.443
3jq8DX3Pteridine reductase, putative/0.443
4c77N01Phenylacetone monooxygenase1.14.13.920.443
4cryACOPanD regulatory factor/0.443
4j6dTESCytochrome P450 monooxygenase/0.443
4o71CPBBromodomain-containing protein 4/0.443
4qbjNHMGlycylpeptide N-tetradecanoyltransferase2.3.1.970.443
4qmnDB8Serine/threonine-protein kinase 242.7.11.10.443
4wdb2AM2',3'-cyclic-nucleotide 3'-phosphodiesterase3.1.4.370.443
3rfmCFFAdenosine receptor A2a/0.443
1x8b824Wee1-like protein kinase2.7.10.20.442
2vbpVB1Isopenicillin N synthase1.21.3.10.442
3fmlFMLMitogen-activated protein kinase 14/0.442
3gyuDL7Nuclear hormone receptor of the steroid/thyroid hormone receptors superfamily/0.442
3tfq07MCorticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.442
4flh14KPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform2.7.1.1530.442
4gk2L66Ephrin type-A receptor 32.7.10.10.442
4ict1EDMycocyclosin synthase1.14.21.90.442
4o7uTHFThymidylate synthase/0.442
4qa1B3NHistone deacetylase 83.5.1.980.442
1bq1CB3Thymidylate synthase/0.441
1pp9SMACytochrome b/0.441
2hb7O1CVitamin D3 receptor/0.441
2vbdV10Isopenicillin N synthase1.21.3.10.441
3gxoMQAMitomycin biosynthesis 6-O-methyltransferase/0.441
3oct1N1Tyrosine-protein kinase BTK2.7.10.20.441
4mxoDB8Proto-oncogene tyrosine-protein kinase Src2.7.10.20.441
4v12POGMaoC like domain protein/0.441
1g3mPCQEstrogen sulfotransferase2.8.2.40.440
1s19MC9Vitamin D3 receptor/0.440
1tsdF89Thymidylate synthase/0.440
1yqj6NPMitogen-activated protein kinase 14/0.440
1zprCB3Thymidylate synthase/0.440
2bjsACVIsopenicillin N synthase1.21.3.10.440
2qocANPEphrin type-A receptor 32.7.10.10.440
3acy702Dehydrosqualene synthase/0.440
3ielU5PRibonuclease TTHA02523.10.440
3qcjNX4Receptor-type tyrosine-protein phosphatase gamma3.1.3.480.440
3qm4PN0Cytochrome P450 2D6/0.440
3ue4DB8Tyrosine-protein kinase ABL12.7.10.20.440
3uk6ADPRuvB-like 23.6.4.120.440
4agcAXIVascular endothelial growth factor receptor 22.7.10.10.440
4bfrJ82Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform2.7.1.1530.440
4h9614QDihydrofolate reductase1.5.1.30.440
4isk1JYThymidylate synthase/0.440
4nb6444Nuclear receptor ROR-gamma/0.440
5iu86DZAdenosine receptor A2a/0.440