1.820 Å
X-ray
2000-08-29
Name: | Isoliquiritigenin 2'-O-methyltransferase |
---|---|
ID: | CHOMT_MEDSA |
AC: | P93324 |
Organism: | Medicago sativa |
Reign: | Eukaryota |
TaxID: | 3879 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
D | 100 % |
B-Factor: | 33.735 |
---|---|
Number of residues: | 24 |
Including | |
Standard Amino Acids: | 21 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 3 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.294 | 1471.500 |
% Hydrophobic | % Polar |
---|---|
62.84 | 37.16 |
According to VolSite |
HET Code: | HCC |
---|---|
Formula: | C15H12O4 |
Molecular weight: | 256.253 g/mol |
DrugBank ID: | DB03285 |
Buried Surface Area: | 53.34 % |
Polar Surface area: | 77.76 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 3 |
Rings: | 2 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 3 |
X | Y | Z |
---|---|---|
5.94395 | -13.4729 | 53.5285 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C8 | CZ | PHE- 135 | 4.08 | 0 | Hydrophobic |
C15 | CB | PHE- 135 | 4.12 | 0 | Hydrophobic |
C4 | SD | MET- 189 | 4.39 | 0 | Hydrophobic |
C5 | CE | MET- 189 | 3.89 | 0 | Hydrophobic |
C15 | CG2 | VAL- 192 | 3.69 | 0 | Hydrophobic |
C13 | CG1 | VAL- 192 | 3.78 | 0 | Hydrophobic |
C11 | CG1 | VAL- 192 | 3.84 | 0 | Hydrophobic |
C11 | CD2 | LEU- 325 | 3.73 | 0 | Hydrophobic |
C8 | CD2 | LEU- 328 | 4.36 | 0 | Hydrophobic |
C3 | CD2 | LEU- 328 | 3.6 | 0 | Hydrophobic |
C4 | SD | MET- 329 | 4.11 | 0 | Hydrophobic |
O19 | OG1 | THR- 332 | 2.6 | 145.91 | H-Bond (Protein Donor) |
C1 | CG2 | THR- 332 | 4 | 0 | Hydrophobic |
O10 | O | HOH- 2018 | 3.04 | 133.99 | H-Bond (Protein Donor) |