Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ox34X4Ribosyldihydronicotinamide dehydrogenase [quinone]

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3ox34X4Ribosyldihydronicotinamide dehydrogenase [quinone]/1.000
4zvmDM2Ribosyldihydronicotinamide dehydrogenase [quinone]/0.634
1sg0STLRibosyldihydronicotinamide dehydrogenase [quinone]/0.619
3nhpHGZRibosyldihydronicotinamide dehydrogenase [quinone]/0.606
3nhrRZWRibosyldihydronicotinamide dehydrogenase [quinone]/0.606
3nhlYTRRibosyldihydronicotinamide dehydrogenase [quinone]/0.604
2bzsCB1Ribosyldihydronicotinamide dehydrogenase [quinone]/0.599
4qohSTLRibosyldihydronicotinamide dehydrogenase [quinone]/0.596
3ox1695Ribosyldihydronicotinamide dehydrogenase [quinone]/0.594
3nhjA2ZRibosyldihydronicotinamide dehydrogenase [quinone]/0.593
2qmzLDPRibosyldihydronicotinamide dehydrogenase [quinone]/0.587
4gr9372Ribosyldihydronicotinamide dehydrogenase [quinone]/0.579
3uxhUXHRibosyldihydronicotinamide dehydrogenase [quinone]/0.571
4gqiM49Ribosyldihydronicotinamide dehydrogenase [quinone]/0.571
3uxe465Ribosyldihydronicotinamide dehydrogenase [quinone]/0.568
3nhfVVVRibosyldihydronicotinamide dehydrogenase [quinone]/0.561
3nfrEWQRibosyldihydronicotinamide dehydrogenase [quinone]/0.558
3g5mFADRibosyldihydronicotinamide dehydrogenase [quinone]/0.557
4fgj1PQRibosyldihydronicotinamide dehydrogenase [quinone]/0.555
3nhwZXZRibosyldihydronicotinamide dehydrogenase [quinone]/0.547
3nhyA7BRibosyldihydronicotinamide dehydrogenase [quinone]/0.547
3o73O73Ribosyldihydronicotinamide dehydrogenase [quinone]/0.538
4zvnFADRibosyldihydronicotinamide dehydrogenase [quinone]/0.535
3gamMXXRibosyldihydronicotinamide dehydrogenase [quinone]/0.529
3owxXRARibosyldihydronicotinamide dehydrogenase [quinone]/0.525
3ox279XRibosyldihydronicotinamide dehydrogenase [quinone]/0.524
1zx1CB1Ribosyldihydronicotinamide dehydrogenase [quinone]/0.523
1xi2CB1Ribosyldihydronicotinamide dehydrogenase [quinone]/0.511
4zvlFADRibosyldihydronicotinamide dehydrogenase [quinone]/0.510
1qr2FADRibosyldihydronicotinamide dehydrogenase [quinone]/0.500
3nhkVAPRibosyldihydronicotinamide dehydrogenase [quinone]/0.500
4qoeFADRibosyldihydronicotinamide dehydrogenase [quinone]/0.479
3nhuM42Ribosyldihydronicotinamide dehydrogenase [quinone]/0.471
2qmyFADRibosyldihydronicotinamide dehydrogenase [quinone]/0.465
4qofFMNRibosyldihydronicotinamide dehydrogenase [quinone]/0.463
1gg5E09NAD(P)H dehydrogenase [quinone] 11.6.5.20.442