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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2w6oOA3Biotin carboxylase6.3.4.14

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2w6oOA3Biotin carboxylase6.3.4.141.000
2w6qOA5Biotin carboxylase6.3.4.140.576
4mv1ADPBiotin carboxylase6.3.4.140.524
2v5aLZLBiotin carboxylase6.3.4.140.522
2w6zL21Biotin carboxylase6.3.4.140.518
2vr1ATFBiotin carboxylase6.3.4.140.502
4mv4ACPBiotin carboxylase6.3.4.140.501
2v58LZJBiotin carboxylase6.3.4.140.489
3jziJZLBiotin carboxylase6.3.4.140.482
2w6mOA1Biotin carboxylase6.3.4.140.481
2v59LZKBiotin carboxylase6.3.4.140.478
4mv8ACPBiotin carboxylase6.3.4.140.478
2j9gANPBiotin carboxylase6.3.4.140.477
4mv3ACPBiotin carboxylase6.3.4.140.460
3jzfJZKBiotin carboxylase6.3.4.140.455
3g8dADPBiotin carboxylase6.3.4.140.453
2w6pOA4Biotin carboxylase6.3.4.140.449
3p62FMNPentaerythritol tetranitrate reductase/0.446
2w71L23Biotin carboxylase6.3.4.140.445
2vcmM11Isopenicillin N synthase1.21.3.10.443
1ot7CHCBile acid receptor/0.441