1.900 Å
X-ray
2008-12-19
| Name: | Biotin carboxylase |
|---|---|
| ID: | ACCC_ECOLI |
| AC: | P24182 |
| Organism: | Escherichia coli |
| Reign: | Bacteria |
| TaxID: | 83333 |
| EC Number: | 6.3.4.14 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 23.064 |
|---|---|
| Number of residues: | 20 |
| Including | |
| Standard Amino Acids: | 19 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 1 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.577 | 735.750 |
| % Hydrophobic | % Polar |
|---|---|
| 42.66 | 57.34 |
| According to VolSite | |

| HET Code: | L21 |
|---|---|
| Formula: | C10H13N5 |
| Molecular weight: | 203.244 g/mol |
| DrugBank ID: | DB08074 |
| Buried Surface Area: | 61.5 % |
| Polar Surface area: | 69.62 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 4 |
| H-Bond Donors: | 1 |
| Rings: | 2 |
| Aromatic rings: | 2 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 2 |
| X | Y | Z |
|---|---|---|
| 2.68153 | -23.8659 | 23.9925 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C14 | CD1 | ILE- 157 | 4.26 | 0 | Hydrophobic |
| N9 | NZ | LYS- 159 | 2.75 | 164.23 | H-Bond (Protein Donor) |
| N10 | OE2 | GLU- 201 | 3.13 | 167.78 | H-Bond (Ligand Donor) |
| N10 | O | LYS- 202 | 2.88 | 158.68 | H-Bond (Ligand Donor) |
| C12 | CE1 | TYR- 203 | 4.21 | 0 | Hydrophobic |
| N1 | N | LEU- 204 | 3.13 | 164.68 | H-Bond (Protein Donor) |
| C12 | CD1 | ILE- 437 | 4.27 | 0 | Hydrophobic |