2.000 Å
X-ray
2008-12-18
Name: | Biotin carboxylase |
---|---|
ID: | ACCC_ECOLI |
AC: | P24182 |
Organism: | Escherichia coli |
Reign: | Bacteria |
TaxID: | 83333 |
EC Number: | 6.3.4.14 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 21.812 |
---|---|
Number of residues: | 23 |
Including | |
Standard Amino Acids: | 20 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 3 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.533 | 610.875 |
% Hydrophobic | % Polar |
---|---|
46.96 | 53.04 |
According to VolSite |
HET Code: | OA1 |
---|---|
Formula: | C10H7BrN2O2 |
Molecular weight: | 267.079 g/mol |
DrugBank ID: | DB08314 |
Buried Surface Area: | 62.17 % |
Polar Surface area: | 69.12 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 3 |
H-Bond Donors: | 1 |
Rings: | 2 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
2.43533 | -23.2804 | 23.9646 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C3 | CD1 | ILE- 157 | 3.75 | 0 | Hydrophobic |
O6 | NZ | LYS- 159 | 2.99 | 139.44 | H-Bond (Protein Donor) |
O10 | NZ | LYS- 159 | 2.85 | 127.92 | H-Bond (Protein Donor) |
C4 | CE | MET- 169 | 3.51 | 0 | Hydrophobic |
BR1 | CG2 | VAL- 171 | 4.25 | 0 | Hydrophobic |
N15 | OE2 | GLU- 201 | 3.09 | 154.54 | H-Bond (Ligand Donor) |
N15 | O | LYS- 202 | 2.58 | 150.15 | H-Bond (Ligand Donor) |
BR1 | CE1 | TYR- 203 | 3.94 | 0 | Hydrophobic |
N13 | N | LEU- 204 | 3.19 | 173.7 | H-Bond (Protein Donor) |
C8 | CD1 | ILE- 437 | 3.53 | 0 | Hydrophobic |