2.310 Å
X-ray
2008-10-02
| Name: | Biotin carboxylase |
|---|---|
| ID: | ACCC_ECOLI |
| AC: | P24182 |
| Organism: | Escherichia coli |
| Reign: | Bacteria |
| TaxID: | 83333 |
| EC Number: | 6.3.4.14 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 100 % |
| B-Factor: | 29.187 |
|---|---|
| Number of residues: | 29 |
| Including | |
| Standard Amino Acids: | 28 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 1 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.701 | 1161.000 |
| % Hydrophobic | % Polar |
|---|---|
| 37.21 | 62.79 |
| According to VolSite | |

| HET Code: | LZL |
|---|---|
| Formula: | C17H15N5 |
| Molecular weight: | 289.334 g/mol |
| DrugBank ID: | DB08146 |
| Buried Surface Area: | 62.91 % |
| Polar Surface area: | 67.93 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 5 |
| H-Bond Donors: | 1 |
| Rings: | 4 |
| Aromatic rings: | 3 |
| Anionic atoms: | 0 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 2 |
| X | Y | Z |
|---|---|---|
| 4.86091 | -22.7675 | 24.1655 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| N18 | NZ | LYS- 159 | 2.84 | 145.13 | H-Bond (Protein Donor) |
| N6 | NZ | LYS- 159 | 3.17 | 141.03 | H-Bond (Protein Donor) |
| C1 | CE | MET- 169 | 4.28 | 0 | Hydrophobic |
| N22 | OE2 | GLU- 201 | 3.2 | 158.61 | H-Bond (Ligand Donor) |
| N22 | O | LYS- 202 | 2.73 | 158.98 | H-Bond (Ligand Donor) |
| N20 | N | LEU- 204 | 3.18 | 164.53 | H-Bond (Protein Donor) |
| C19 | CG | GLN- 233 | 3.97 | 0 | Hydrophobic |
| C9 | CD1 | LEU- 278 | 3.47 | 0 | Hydrophobic |
| C7 | CD2 | LEU- 278 | 4.31 | 0 | Hydrophobic |
| C4 | CD2 | LEU- 278 | 3.88 | 0 | Hydrophobic |
| C13 | CG2 | ILE- 437 | 3.92 | 0 | Hydrophobic |
| C3 | CD1 | ILE- 437 | 3.63 | 0 | Hydrophobic |