Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2bgiFADNADPH:ferredoxin reductase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2bgiFADNADPH:ferredoxin reductase/1.000
4fk8FADFerredoxin--NADP reductase/0.698
1a8pFADFerredoxin--NADP reductase/0.656
2vnkFADNADPH:ferredoxin reductase/0.648
3crzFADFerredoxin--NADP+ reductase/0.642
2bgjFADNADPH:ferredoxin reductase/0.641
2vnjFADNADPH:ferredoxin reductase/0.633
4b4dFADFerredoxin-NADP reductase/0.602
2qdxFADFerredoxin--NADP+ reductase/0.601
4k1xFADNADPH:ferredoxin reductase/0.531
2vnhFADNADPH:ferredoxin reductase/0.503
3fpkFADFerredoxin-NADP reductase/0.483
3v2uATPProtein GAL3/0.467
1xe55FEPlasmepsin-23.4.23.390.464
1cqxFADFlavohemoprotein/0.461
3muoZPRProlyl endopeptidase/0.460
4frkDWDBeta-secretase 13.4.23.460.459
2cf6NAPCinnamyl alcohol dehydrogenase 51.1.1.1950.458
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
3oqfS51Renin3.4.23.150.456
4bb3KKAIsopenicillin N synthase1.21.3.10.455
1adfTADAlcohol dehydrogenase E chain1.1.1.10.454
2xc3RT8Steroid C26-monooxygenase1.14.13.1410.454
1qrpHH0Pepsin A-43.4.23.10.449
3oeeANPATP synthase subunit alpha, mitochondrial/0.449
3oeeANPATP synthase subunit beta, mitochondrial3.6.3.140.449
1h85FADFerredoxin--NADP reductase1.18.1.20.448
3lqfNADGalactitol dehydrogenase/0.448
4bfwZVWPantothenate kinase2.7.1.330.448
4dptAGSMevalonate diphosphate decarboxylase/0.448
4yafFADNADPH--cytochrome P450 reductase/0.448
1fdrFADFerredoxin--NADP reductase1.18.1.20.447
2vwqNAPGlucose 1-dehydrogenase/0.447
3b70NAPEnoyl reductase LovC10.447
1bygSTUTyrosine-protein kinase CSK/0.446
2cy0NAPShikimate dehydrogenase (NADP(+))/0.446
2zb3NDPProstaglandin reductase 21.3.1.480.446
3d91REMRenin3.4.23.150.446
3p62FMNPentaerythritol tetranitrate reductase/0.446
1krhFADBenzoate 1,2-dioxygenase electron transfer component1.18.1.30.445
3bc3OPTCathepsin L13.4.22.150.445
3triNAPPyrroline-5-carboxylate reductase/0.445
4y9uFADNADPH--cytochrome P450 reductase/0.445
3mdmFJZCholesterol 24-hydroxylase/0.444
1ib0FADNADH-cytochrome b5 reductase 31.6.2.20.443
1ja1FADNADPH--cytochrome P450 reductase/0.443
1xe65FPPlasmepsin-23.4.23.390.443
2yylFAD4-hydroxyphenylacetate 3-monooxygenase oxygenase component1.14.14.90.443
4ejvLCLTranscriptional regulator TcaR/0.443
2wyvNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.442
1psa0ZLPepsin A3.4.23.10.441
3rq6APRADP-dependent (S)-NAD(P)H-hydrate dehydratase/0.441
4eagATP5'-AMP-activated protein kinase subunit gamma-1/0.441
1p0fNAPNADP-dependent alcohol dehydrogenase1.1.1.20.440
2qd4CHDFerrochelatase, mitochondrial4.99.1.10.440
2x86ADPADP-L-glycero-D-manno-heptose-6-epimerase/0.440
3gfbNADL-threonine 3-dehydrogenase/0.440
4zlaBESCytosol aminopeptidase3.4.11.10.440