2.900 Å
X-ray
2012-04-07
| Name: | Transcriptional regulator TcaR |
|---|---|
| ID: | Q5HLN6_STAEQ |
| AC: | Q5HLN6 |
| Organism: | Staphylococcus epidermidis |
| Reign: | Bacteria |
| TaxID: | 176279 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| A | 70 % |
| B | 30 % |
| B-Factor: | 51.944 |
|---|---|
| Number of residues: | 27 |
| Including | |
| Standard Amino Acids: | 27 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.673 | 1836.000 |
| % Hydrophobic | % Polar |
|---|---|
| 42.28 | 57.72 |
| According to VolSite | |

| HET Code: | LCL |
|---|---|
| Formula: | C11H11Cl2N2O5 |
| Molecular weight: | 322.121 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 53.17 % |
| Polar Surface area: | 123.99 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 5 |
| H-Bond Donors: | 3 |
| Rings: | 1 |
| Aromatic rings: | 1 |
| Anionic atoms: | 2 |
| Cationic atoms: | 1 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 6 |
| X | Y | Z |
|---|---|---|
| -14.9396 | -39.3618 | -2.943 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| CL1 | CG2 | ILE- 16 | 4.46 | 0 | Hydrophobic |
| C4 | CB | ASN- 20 | 4.33 | 0 | Hydrophobic |
| O9B | O | ALA- 38 | 2.62 | 164.06 | H-Bond (Ligand Donor) |
| C11 | CB | ALA- 38 | 3.82 | 0 | Hydrophobic |
| C9 | CB | GLU- 39 | 4.07 | 0 | Hydrophobic |
| C9 | CB | HIS- 42 | 3.71 | 0 | Hydrophobic |
| C5 | CG | GLN- 61 | 4.47 | 0 | Hydrophobic |
| C5 | CG1 | VAL- 63 | 4.1 | 0 | Hydrophobic |