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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1h85FADFerredoxin--NADP reductase1.18.1.2

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1h85FADFerredoxin--NADP reductase1.18.1.21.000
1qh0FADFerredoxin--NADP reductase1.18.1.20.893
1qgyFADFerredoxin--NADP reductase1.18.1.20.834
1b2rFADFerredoxin--NADP reductase1.18.1.20.792
1go2FADFerredoxin--NADP reductase1.18.1.20.767
1e64FADFerredoxin--NADP reductase1.18.1.20.748
1bjkFADFerredoxin--NADP reductase1.18.1.20.742
4c43FADFerredoxin--NADP reductase1.18.1.20.628
3zbtFADFerredoxin--NADP reductase1.18.1.20.613
2b5oFADFerredoxin--NADP reductase1.18.1.20.609
3zc3FADFerredoxin--NADP reductase1.18.1.20.605
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.596
1gjrFADFerredoxin--NADP reductase1.18.1.20.593
1ewyFADFerredoxin--NADP reductase1.18.1.20.591
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.591
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.585
4bprFADFerredoxin--NADP reductase1.18.1.20.583
3w5uFADFerredoxin/0.578
1e63FADFerredoxin--NADP reductase1.18.1.20.571
1qgzFADFerredoxin--NADP reductase1.18.1.20.568
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.567
3vo2FADFerredoxin--NADP reductase/0.565
1queFADFerredoxin--NADP reductase1.18.1.20.561
1ogjFADFerredoxin--NADP reductase1.18.1.20.547
1sm4FADFerredoxin--NADP reductase/0.545
1w87FADFerredoxin--NADP reductase1.18.1.20.544
1ogiFADFerredoxin--NADP reductase1.18.1.20.543
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.541
1gr1FADFerredoxin--NADP reductase1.18.1.20.539
2rc6FADFerredoxin--NADP reductase/0.536
1gvhFADFlavohemoprotein/0.533
1fndFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.532
1gawFADFerredoxin/0.532
1e62FADFerredoxin--NADP reductase1.18.1.20.525
2ok8FADFerredoxin--NADP reductase, apicoplast/0.525
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.523
1amoFADNADPH--cytochrome P450 reductase/0.519
1h42FADFerredoxin--NADP reductase1.18.1.20.514
2xncFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.514
3qe2FADNADPH--cytochrome P450 reductase/0.511
1ja1FADNADPH--cytochrome P450 reductase/0.510
3qfsFADNADPH--cytochrome P450 reductase/0.507
1gaqFADFerredoxin/0.506
4y9uFADNADPH--cytochrome P450 reductase/0.506
4y9rFADNADPH--cytochrome P450 reductase/0.500
4yaoFADNADPH--cytochrome P450 reductase/0.495
1w35FADFerredoxin--NADP reductase1.18.1.20.491
3ojxFADNADPH--cytochrome P450 reductase/0.488
3qftFADNADPH--cytochrome P450 reductase/0.488
3qfcFADNADPH--cytochrome P450 reductase/0.480
1tllFADNitric oxide synthase, brain1.14.13.390.478
3fpkFADFerredoxin-NADP reductase/0.477
2bpoFADNADPH--cytochrome P450 reductase/0.475
4uajFADNa(+)-translocating NADH-quinone reductase subunit F/0.475
4yafFADNADPH--cytochrome P450 reductase/0.470
2vnkFADNADPH:ferredoxin reductase/0.467
4bfuZVUPantothenate kinase2.7.1.330.467
1fdrFADFerredoxin--NADP reductase1.18.1.20.466
1f20FADNitric oxide synthase, brain1.14.13.390.463
1j9zFADNADPH--cytochrome P450 reductase/0.462
2vnjFADNADPH:ferredoxin reductase/0.461
3busSAHDemethylrebeccamycin-D-glucose O-methyltransferase/0.461
2bgjFADNADPH:ferredoxin reductase/0.460
3jqrFADFerredoxin--NADP reductase, apicoplast/0.460
2piaFMNPhthalate dioxygenase reductase/0.459
3c0g3AMPeripheral plasma membrane protein CASK2.7.11.10.459
4a322CDGlycylpeptide N-tetradecanoyltransferase/0.459
3v2uATPProtein GAL3/0.458
2rc5FADFerredoxin--NADP reductase/0.457
3e6eDCSAlanine racemase/0.456
3gwfFADCyclohexanone monooxygenase/0.456
4a30QMIGlycylpeptide N-tetradecanoyltransferase/0.454
1ptjNAPNAD(P) transhydrogenase subunit beta1.6.1.20.453
2bgiFADNADPH:ferredoxin reductase/0.453
3n0bFADFlavin-dependent thymidylate synthase2.1.1.1480.452
3s5wFADL-ornithine N(5)-monooxygenase/0.452
3buvNAP3-oxo-5-beta-steroid 4-dehydrogenase/0.451
1vbiNADMalate/L-lactate dehydrogenase family protein/0.449
2pswCOAN-alpha-acetyltransferase 50/0.449
2r6hFADNa(+)-translocating NADH-quinone reductase subunit F/0.449
2vnhFADNADPH:ferredoxin reductase/0.449
4b65FADL-ornithine N(5)-monooxygenase/0.449
1i5rHYCEstradiol 17-beta-dehydrogenase 11.1.1.620.446
2ejzSAHDiphthine synthase/0.446
3abxRCBGlucanase/0.446
4fk8FADFerredoxin--NADP reductase/0.446
1hzzNAPNAD(P) transhydrogenase subunit beta1.6.1.20.445
3q9bB3NAcetylpolyamine amidohydrolase/0.445
1x1bSAHC-20 methyltransferase/0.442
2owfSAHDiphthine synthase/0.442
3otwCOAPhosphopantetheine adenylyltransferase/0.442
1a8pFADFerredoxin--NADP reductase/0.441
1iolESTEstradiol 17-beta-dehydrogenase 11.1.1.620.441
1r58AO5Methionine aminopeptidase 2/0.441
3u8l09QAcetylcholine-binding protein/0.441
2hydADPPutative multidrug export ATP-binding/permease protein SAV18663.6.30.440