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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1e64FADFerredoxin--NADP reductase1.18.1.2

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1e64FADFerredoxin--NADP reductase1.18.1.21.000
1qgyFADFerredoxin--NADP reductase1.18.1.20.776
1h85FADFerredoxin--NADP reductase1.18.1.20.764
1qh0FADFerredoxin--NADP reductase1.18.1.20.750
1bjkFADFerredoxin--NADP reductase1.18.1.20.725
1go2FADFerredoxin--NADP reductase1.18.1.20.708
1b2rFADFerredoxin--NADP reductase1.18.1.20.683
3zbtFADFerredoxin--NADP reductase1.18.1.20.638
1e63FADFerredoxin--NADP reductase1.18.1.20.632
4c43FADFerredoxin--NADP reductase1.18.1.20.630
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.617
2b5oFADFerredoxin--NADP reductase1.18.1.20.603
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.599
1e62FADFerredoxin--NADP reductase1.18.1.20.597
4bprFADFerredoxin--NADP reductase1.18.1.20.595
1queFADFerredoxin--NADP reductase1.18.1.20.593
3w5uFADFerredoxin/0.589
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.585
1ewyFADFerredoxin--NADP reductase1.18.1.20.581
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.574
1ogiFADFerredoxin--NADP reductase1.18.1.20.571
3zc3FADFerredoxin--NADP reductase1.18.1.20.570
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.570
3vo2FADFerredoxin--NADP reductase/0.565
1qgzFADFerredoxin--NADP reductase1.18.1.20.564
1gawFADFerredoxin/0.563
1sm4FADFerredoxin--NADP reductase/0.560
1gjrFADFerredoxin--NADP reductase1.18.1.20.559
1h42FADFerredoxin--NADP reductase1.18.1.20.559
1ogjFADFerredoxin--NADP reductase1.18.1.20.558
1gr1FADFerredoxin--NADP reductase1.18.1.20.550
1w35FADFerredoxin--NADP reductase1.18.1.20.549
2rc6FADFerredoxin--NADP reductase/0.549
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.547
1w87FADFerredoxin--NADP reductase1.18.1.20.545
4y9uFADNADPH--cytochrome P450 reductase/0.543
3fpkFADFerredoxin-NADP reductase/0.535
3qfsFADNADPH--cytochrome P450 reductase/0.531
1gaqFADFerredoxin/0.530
4uajFADNa(+)-translocating NADH-quinone reductase subunit F/0.529
3qe2FADNADPH--cytochrome P450 reductase/0.524
2piaFMNPhthalate dioxygenase reductase/0.522
1gvhFADFlavohemoprotein/0.512
3ojxFADNADPH--cytochrome P450 reductase/0.512
1ja1FADNADPH--cytochrome P450 reductase/0.511
1j9zFADNADPH--cytochrome P450 reductase/0.508
1fndFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.506
4yaoFADNADPH--cytochrome P450 reductase/0.506
2xncFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.505
1tllFADNitric oxide synthase, brain1.14.13.390.500
4y9rFADNADPH--cytochrome P450 reductase/0.499
2ok8FADFerredoxin--NADP reductase, apicoplast/0.496
1amoFADNADPH--cytochrome P450 reductase/0.493
1f20FADNitric oxide synthase, brain1.14.13.390.484
4fk8FADFerredoxin--NADP reductase/0.484
1bx0FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.476
2bf4FADNADPH--cytochrome P450 reductase/0.475
5ah5LSSLeucine--tRNA ligase/0.474
4yafFADNADPH--cytochrome P450 reductase/0.473
2rc5FADFerredoxin--NADP reductase/0.470
3gwfFADCyclohexanone monooxygenase/0.466
1fdrFADFerredoxin--NADP reductase1.18.1.20.465
1krhFADBenzoate 1,2-dioxygenase electron transfer component1.18.1.30.465
3qftFADNADPH--cytochrome P450 reductase/0.463
3u8l09QAcetylcholine-binding protein/0.462
3qfrFADNADPH--cytochrome P450 reductase/0.459
4b65FADL-ornithine N(5)-monooxygenase/0.458
1a8pFADFerredoxin--NADP reductase/0.457
4rn615UProthrombin3.4.21.50.455
3gwfNAPCyclohexanone monooxygenase/0.454
3q9bB3NAcetylpolyamine amidohydrolase/0.454
3busSAHDemethylrebeccamycin-D-glucose O-methyltransferase/0.453
1x1bSAHC-20 methyltransferase/0.451
2r6hFADNa(+)-translocating NADH-quinone reductase subunit F/0.451
2z7hGG3Geranylgeranyl pyrophosphate synthase/0.450
4a322CDGlycylpeptide N-tetradecanoyltransferase/0.450
2bgiFADNADPH:ferredoxin reductase/0.449
4bfsZVSPantothenate kinase2.7.1.330.449
2bgjFADNADPH:ferredoxin reductase/0.448
4gv08MEPoly [ADP-ribose] polymerase 32.4.2.300.448
4ge90L0Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial2.6.1.390.447
1x1dSAHC-20 methyltransferase/0.446
3rupADPBiotin carboxylase6.3.4.140.445
3zhtTD9Multifunctional 2-oxoglutarate metabolism enzyme1.2.4.20.445
1aquESTEstrogen sulfotransferase, testis isoform2.8.2.40.444
2vnkFADNADPH:ferredoxin reductase/0.444
4gv4MEJPoly [ADP-ribose] polymerase 32.4.2.300.443
4p2lFADSulfhydryl oxidase 11.8.3.20.443
1cqxFADFlavohemoprotein/0.442
1kyvRBF6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.442
2jl1NAPTriphenylmethane reductase/0.442
4n9qFMNFMN-dependent NADH-azoreductase 1/0.442
1wliFMNFMN-binding protein/0.440
1x1cSAHC-20 methyltransferase/0.440
5dozNDPJamJ/0.440