Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4l4c CAM Camphor 5-monooxygenase 1.14.15.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4l4c CAMCamphor 5-monooxygenase 1.14.15.1 0.831
4l4a CAMCamphor 5-monooxygenase 1.14.15.1 0.798
2a1n CAMCamphor 5-monooxygenase 1.14.15.1 0.783
4l4e CAMCamphor 5-monooxygenase 1.14.15.1 0.783
1uyu CAMCamphor 5-monooxygenase 1.14.15.1 0.782
4l4f CAMCamphor 5-monooxygenase 1.14.15.1 0.782
4g3r CAMCamphor 5-monooxygenase 1.14.15.1 0.774
3wrm CAMCamphor 5-monooxygenase 1.14.15.1 0.772
4l49 CAMCamphor 5-monooxygenase 1.14.15.1 0.768
3fwg CAMCamphor 5-monooxygenase 1.14.15.1 0.766
3wrl CAMCamphor 5-monooxygenase 1.14.15.1 0.766
1yrc CAMCamphor 5-monooxygenase 1.14.15.1 0.765
4l4b CAMCamphor 5-monooxygenase 1.14.15.1 0.763
2zax CAMCamphor 5-monooxygenase 1.14.15.1 0.760
1noo CAHCamphor 5-monooxygenase 1.14.15.1 0.757
2qbl CAMCamphor 5-monooxygenase 1.14.15.1 0.756
2cpp CAMCamphor 5-monooxygenase 1.14.15.1 0.752
1t87 CAMCamphor 5-monooxygenase 1.14.15.1 0.749
6cp4 CAMCamphor 5-monooxygenase 1.14.15.1 0.747
2qbn CAMCamphor 5-monooxygenase 1.14.15.1 0.746
1efz PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.744
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
1v2h GUNPurine nucleoside phosphorylase 2.4.2.1 0.744
1yrd CAMCamphor 5-monooxygenase 1.14.15.1 0.744
4e5i 0N9Polymerase acidic protein / 0.744
4e5l DBHPolymerase acidic protein / 0.744
4ek9 EP4Histone-lysine N-methyltransferase, H3 lysine-79 specific 2.1.1.43 0.744
2zui CAMCamphor 5-monooxygenase 1.14.15.1 0.743
3fwi CAMCamphor 5-monooxygenase 1.14.15.1 0.743
1geb CAMCamphor 5-monooxygenase 1.14.15.1 0.738
4cp4 CAMCamphor 5-monooxygenase 1.14.15.1 0.727
2zaw CAMCamphor 5-monooxygenase 1.14.15.1 0.721
4ek1 CAMCamphor 5-monooxygenase 1.14.15.1 0.709
3wrh CAMCamphor 5-monooxygenase 1.14.15.1 0.707
2feu CAMCamphor 5-monooxygenase 1.14.15.1 0.700
3fwf CAMCamphor 5-monooxygenase 1.14.15.1 0.700
3fwj CAMCamphor 5-monooxygenase 1.14.15.1 0.700
3l63 CAMCamphor 5-monooxygenase 1.14.15.1 0.700
3wrj CAMCamphor 5-monooxygenase 1.14.15.1 0.698
4c9o CAMCytochrome P450 / 0.693
4kky CAMCamphor 5-monooxygenase 1.14.15.1 0.686
2a1m CAMCamphor 5-monooxygenase 1.14.15.1 0.684
1t88 CAMCamphor 5-monooxygenase 1.14.15.1 0.682
2z97 CAMCamphor 5-monooxygenase 1.14.15.1 0.680
5cp4 CAMCamphor 5-monooxygenase 1.14.15.1 0.679
1dz6 CAMCamphor 5-monooxygenase 1.14.15.1 0.676
1p0e PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1ulb GUNPurine nucleoside phosphorylase 2.4.2.1 0.660
2pot GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
2pwu GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
2z1x PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
3bld PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4gcx PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4h7z GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4hqv QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4hvx QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
2a1o CAMCamphor 5-monooxygenase 1.14.15.1 0.655
4l4d CAMCamphor 5-monooxygenase 1.14.15.1 0.654
4c9p CAMCytochrome P450 / 0.650