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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4l2f 1V3 Tankyrase-2 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4l2f 1V3Tankyrase-2 2.4.2.30 0.859
4bux F35Tankyrase-2 2.4.2.30 0.783
4buu F38Tankyrase-2 2.4.2.30 0.782
4bud 29FTankyrase-2 2.4.2.30 0.780
4bus 32FTankyrase-2 2.4.2.30 0.780
4but 31FTankyrase-2 2.4.2.30 0.779
4bu9 08CTankyrase-2 2.4.2.30 0.778
4buv 16ITankyrase-2 2.4.2.30 0.773
4hki FLNTankyrase-2 2.4.2.30 0.772
4bue JQFTankyrase-2 2.4.2.30 0.770
4buw F33Tankyrase-2 2.4.2.30 0.769
4hl5 15WTankyrase-2 2.4.2.30 0.769
4hlh 20DTankyrase-2 2.4.2.30 0.769
4hlm 16STankyrase-2 2.4.2.30 0.767
4l0s 1UZTankyrase-2 2.4.2.30 0.767
4l34 1VGTankyrase-2 2.4.2.30 0.767
4hkk AGITankyrase-2 2.4.2.30 0.766
4hlf 15ZTankyrase-2 2.4.2.30 0.766
4l09 1URTankyrase-2 2.4.2.30 0.766
3kr8 XAVTankyrase-2 2.4.2.30 0.765
4l0t 1V0Tankyrase-2 2.4.2.30 0.765
4l0v 1V1Tankyrase-2 2.4.2.30 0.765
4l10 A63Tankyrase-2 2.4.2.30 0.765
4buf F36Tankyrase-2 2.4.2.30 0.764
4kzl 20DTankyrase-2 2.4.2.30 0.764
4kzu A73Tankyrase-2 2.4.2.30 0.763
4l0i 1UWTankyrase-2 2.4.2.30 0.763
4hlk 431Tankyrase-2 2.4.2.30 0.762
4bs4 A64Tankyrase-2 2.4.2.30 0.761
5aku 29FTankyrase-2 2.4.2.30 0.759
4bui W2ETankyrase-2 2.4.2.30 0.755
4l31 F08Tankyrase-2 2.4.2.30 0.754
4l33 F70Tankyrase-2 2.4.2.30 0.750
4hmh F94Tankyrase-2 2.4.2.30 0.746
4l2k 1V8Tankyrase-2 2.4.2.30 0.745
4hlg 20BTankyrase-2 2.4.2.30 0.734
4l32 1VFTankyrase-2 2.4.2.30 0.733
4l2g 1V4Tankyrase-2 2.4.2.30 0.731
4hkn LU2Tankyrase-2 2.4.2.30 0.729
4avw G18Tankyrase-2 2.4.2.30 0.720
4avu LDRTankyrase-2 2.4.2.30 0.719
4pnr G18Tankyrase-2 2.4.2.30 0.708
4bjb P34Tankyrase-2 2.4.2.30 0.705
4gv4 MEJPoly [ADP-ribose] polymerase 3 2.4.2.30 0.694
4pnm NU1Tankyrase-2 2.4.2.30 0.688
3c4h DRLPoly [ADP-ribose] polymerase 3 2.4.2.30 0.681
4gv2 5MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.680
4gv0 8MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.674
4gv7 MEWPoly [ADP-ribose] polymerase 1 2.4.2.30 0.673
2z1x PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.666
4gcx PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.665
1p0e PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.663
2pwu GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.663
3ce0 P34Poly [ADP-ribose] polymerase 3 2.4.2.30 0.663
4hvx QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.662
2pot GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.661
3bld PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.661
1efz PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
1m3q ANGN-glycosylase/DNA lyase 3.2.2 0.660
1v2h GUNPurine nucleoside phosphorylase 2.4.2.1 0.660
2puc GUNHTH-type transcriptional repressor PurR / 0.660
4e5i 0N9Polymerase acidic protein / 0.660
4e5l DBHPolymerase acidic protein / 0.660
4ek9 EP4Histone-lysine N-methyltransferase, H3 lysine-79 specific 2.1.1.43 0.660
4h7z GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4hqv QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1ozq PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.659
4e5f 0N7Polymerase acidic protein / 0.659
4msk 2C8Tankyrase-1 2.4.2.30 0.657
3c49 KU8Poly [ADP-ribose] polymerase 3 2.4.2.30 0.656
3u9y 09LTankyrase-2 2.4.2.30 0.656
4msg 2C6Tankyrase-1 2.4.2.30 0.655
4f1l 0RYPoly [ADP-ribose] polymerase 14 2.4.2.30 0.653
4r5w XAVPoly [ADP-ribose] polymerase 1 2.4.2.30 0.652
4iue AJ4Tankyrase-2 2.4.2.30 0.650