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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4l0s 1UZ Tankyrase-2 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4l0s 1UZTankyrase-2 2.4.2.30 0.885
4l34 1VGTankyrase-2 2.4.2.30 0.880
4l09 1URTankyrase-2 2.4.2.30 0.879
4l0t 1V0Tankyrase-2 2.4.2.30 0.879
4hlm 16STankyrase-2 2.4.2.30 0.878
4l10 A63Tankyrase-2 2.4.2.30 0.877
4kzu A73Tankyrase-2 2.4.2.30 0.875
4kzl 20DTankyrase-2 2.4.2.30 0.872
4bs4 A64Tankyrase-2 2.4.2.30 0.869
4hki FLNTankyrase-2 2.4.2.30 0.861
4bu9 08CTankyrase-2 2.4.2.30 0.860
4bus 32FTankyrase-2 2.4.2.30 0.859
4l0v 1V1Tankyrase-2 2.4.2.30 0.858
4hlf 15ZTankyrase-2 2.4.2.30 0.856
4buv 16ITankyrase-2 2.4.2.30 0.855
4bux F35Tankyrase-2 2.4.2.30 0.844
4l33 F70Tankyrase-2 2.4.2.30 0.844
4hlh 20DTankyrase-2 2.4.2.30 0.843
4but 31FTankyrase-2 2.4.2.30 0.842
4hlg 20BTankyrase-2 2.4.2.30 0.842
4l0i 1UWTankyrase-2 2.4.2.30 0.841
4l2k 1V8Tankyrase-2 2.4.2.30 0.841
4buf F36Tankyrase-2 2.4.2.30 0.838
4bud 29FTankyrase-2 2.4.2.30 0.837
4hlk 431Tankyrase-2 2.4.2.30 0.823
4hkk AGITankyrase-2 2.4.2.30 0.820
4hkn LU2Tankyrase-2 2.4.2.30 0.813
4l32 1VFTankyrase-2 2.4.2.30 0.811
4bui W2ETankyrase-2 2.4.2.30 0.810
4buu F38Tankyrase-2 2.4.2.30 0.810
3kr8 XAVTankyrase-2 2.4.2.30 0.807
4l31 F08Tankyrase-2 2.4.2.30 0.807
4l2g 1V4Tankyrase-2 2.4.2.30 0.806
4bue JQFTankyrase-2 2.4.2.30 0.799
4buw F33Tankyrase-2 2.4.2.30 0.795
5aku 29FTankyrase-2 2.4.2.30 0.788
4hmh F94Tankyrase-2 2.4.2.30 0.787
4avw G18Tankyrase-2 2.4.2.30 0.771
4l2f 1V3Tankyrase-2 2.4.2.30 0.767
4hl5 15WTankyrase-2 2.4.2.30 0.763
4avu LDRTankyrase-2 2.4.2.30 0.761
4msg 2C6Tankyrase-1 2.4.2.30 0.706
3u9y 09LTankyrase-2 2.4.2.30 0.705
4bjb P34Tankyrase-2 2.4.2.30 0.702
4gv0 8MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.702
4gv4 MEJPoly [ADP-ribose] polymerase 3 2.4.2.30 0.702
4bjc RPBTankyrase-2 2.4.2.30 0.700
4msk 2C8Tankyrase-1 2.4.2.30 0.696
4tjy 3GNTankyrase-2 2.4.2.30 0.685
4pnm NU1Tankyrase-2 2.4.2.30 0.679
4bj9 UHBTankyrase-2 2.4.2.30 0.678
4gv2 5MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.678
4pnr G18Tankyrase-2 2.4.2.30 0.673
3c49 KU8Poly [ADP-ribose] polymerase 3 2.4.2.30 0.672
3c4h DRLPoly [ADP-ribose] polymerase 3 2.4.2.30 0.667
2z1x PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.666
3gn7 3GNPoly [ADP-ribose] polymerase 1 2.4.2.30 0.665
2rd6 78PPoly [ADP-ribose] polymerase 1 2.4.2.30 0.663
3l3m A92Poly [ADP-ribose] polymerase 1 2.4.2.30 0.663
4gcx PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.663
2pot GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.662
2pwu GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.662
4hhz 15SPoly [ADP-ribose] polymerase 1 2.4.2.30 0.662
1p0e PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.661
1efz PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
1m3q ANGN-glycosylase/DNA lyase 3.2.2 0.660
1v2h GUNPurine nucleoside phosphorylase 2.4.2.1 0.660
4e5i 0N9Polymerase acidic protein / 0.660
4e5l DBHPolymerase acidic protein / 0.660
4ek9 EP4Histone-lysine N-methyltransferase, H3 lysine-79 specific 2.1.1.43 0.660
4hvx QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
3bld PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.659
4e5f 0N7Polymerase acidic protein / 0.659
4hqv QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.659
1ozq PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.658
4h7z GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.658
4f1l 0RYPoly [ADP-ribose] polymerase 14 2.4.2.30 0.654
5ds3 09LPoly [ADP-ribose] polymerase 1 2.4.2.30 0.654