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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4f1l 0RY Poly [ADP-ribose] polymerase 14 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4f1l 0RYPoly [ADP-ribose] polymerase 14 2.4.2.30 0.759
4tjy 3GNTankyrase-2 2.4.2.30 0.685
5ds3 09LPoly [ADP-ribose] polymerase 1 2.4.2.30 0.685
4bj9 UHBTankyrase-2 2.4.2.30 0.684
4bjb P34Tankyrase-2 2.4.2.30 0.684
4bjc RPBTankyrase-2 2.4.2.30 0.683
4gv7 MEWPoly [ADP-ribose] polymerase 1 2.4.2.30 0.676
4hki FLNTankyrase-2 2.4.2.30 0.675
4bux F35Tankyrase-2 2.4.2.30 0.672
3l3m A92Poly [ADP-ribose] polymerase 1 2.4.2.30 0.671
4hlm 16STankyrase-2 2.4.2.30 0.671
4l34 1VGTankyrase-2 2.4.2.30 0.670
3gn7 3GNPoly [ADP-ribose] polymerase 1 2.4.2.30 0.668
4l0t 1V0Tankyrase-2 2.4.2.30 0.668
4l10 A63Tankyrase-2 2.4.2.30 0.667
4kzl 20DTankyrase-2 2.4.2.30 0.666
4l09 1URTankyrase-2 2.4.2.30 0.666
4pnm NU1Tankyrase-2 2.4.2.30 0.666
4r5w XAVPoly [ADP-ribose] polymerase 1 2.4.2.30 0.665
4kzu A73Tankyrase-2 2.4.2.30 0.664
2rd6 78PPoly [ADP-ribose] polymerase 1 2.4.2.30 0.662
3l3l L3LPoly [ADP-ribose] polymerase 1 2.4.2.30 0.662
5dsy UHBPoly [ADP-ribose] polymerase 2 2.4.2.30 0.662
4bud 29FTankyrase-2 2.4.2.30 0.661
1efz PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1v2h GUNPurine nucleoside phosphorylase 2.4.2.1 0.660
2puc GUNHTH-type transcriptional repressor PurR / 0.660
2z1x PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
4e5i 0N9Polymerase acidic protein / 0.660
4e5l DBHPolymerase acidic protein / 0.660
4ek9 EP4Histone-lysine N-methyltransferase, H3 lysine-79 specific 2.1.1.43 0.660
2pot GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.659
1p0e PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.657
4but 31FTankyrase-2 2.4.2.30 0.657
4e5f 0N7Polymerase acidic protein / 0.656
4gcx PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.656
2pwu GUNQueuine tRNA-ribosyltransferase 2.4.2.29 0.655
4hlf 15ZTankyrase-2 2.4.2.30 0.655
4msg 2C6Tankyrase-1 2.4.2.30 0.655
4hvx QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.654
4l0s 1UZTankyrase-2 2.4.2.30 0.654
1ozq PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.653
2rcw AAIPoly [ADP-ribose] polymerase 1 2.4.2.30 0.653
3bld PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.653
4bus 32FTankyrase-2 2.4.2.30 0.653
4buv 16ITankyrase-2 2.4.2.30 0.653
4hlg 20BTankyrase-2 2.4.2.30 0.653
4hqv QEIQueuine tRNA-ribosyltransferase 2.4.2.29 0.653
4l0v 1V1Tankyrase-2 2.4.2.30 0.653
4l2f 1V3Tankyrase-2 2.4.2.30 0.653
3c4h DRLPoly [ADP-ribose] polymerase 3 2.4.2.30 0.652
4bu9 08CTankyrase-2 2.4.2.30 0.652
4buf F36Tankyrase-2 2.4.2.30 0.652
4l2k 1V8Tankyrase-2 2.4.2.30 0.652
4bue JQFTankyrase-2 2.4.2.30 0.651
4l33 F70Tankyrase-2 2.4.2.30 0.651
4gv0 8MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.650