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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4buu F38 Tankyrase-2 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4buu F38Tankyrase-2 2.4.2.30 0.884
4but 31FTankyrase-2 2.4.2.30 0.867
4buv 16ITankyrase-2 2.4.2.30 0.862
4bu9 08CTankyrase-2 2.4.2.30 0.861
4bus 32FTankyrase-2 2.4.2.30 0.860
4bux F35Tankyrase-2 2.4.2.30 0.858
4bue JQFTankyrase-2 2.4.2.30 0.857
4bud 29FTankyrase-2 2.4.2.30 0.852
4buw F33Tankyrase-2 2.4.2.30 0.852
4buf F36Tankyrase-2 2.4.2.30 0.848
5aku 29FTankyrase-2 2.4.2.30 0.845
4bui W2ETankyrase-2 2.4.2.30 0.836
3kr8 XAVTankyrase-2 2.4.2.30 0.819
4l0s 1UZTankyrase-2 2.4.2.30 0.810
4hlh 20DTankyrase-2 2.4.2.30 0.807
4hlm 16STankyrase-2 2.4.2.30 0.807
4l0t 1V0Tankyrase-2 2.4.2.30 0.806
4l34 1VGTankyrase-2 2.4.2.30 0.804
4bs4 A64Tankyrase-2 2.4.2.30 0.802
4l09 1URTankyrase-2 2.4.2.30 0.802
4l0v 1V1Tankyrase-2 2.4.2.30 0.801
4l10 A63Tankyrase-2 2.4.2.30 0.801
4kzu A73Tankyrase-2 2.4.2.30 0.800
4l0i 1UWTankyrase-2 2.4.2.30 0.800
4kzl 20DTankyrase-2 2.4.2.30 0.799
4l33 F70Tankyrase-2 2.4.2.30 0.792
4hlk 431Tankyrase-2 2.4.2.30 0.789
4hki FLNTankyrase-2 2.4.2.30 0.787
4l31 F08Tankyrase-2 2.4.2.30 0.787
4hkk AGITankyrase-2 2.4.2.30 0.784
4hlf 15ZTankyrase-2 2.4.2.30 0.783
4l2f 1V3Tankyrase-2 2.4.2.30 0.782
4avw G18Tankyrase-2 2.4.2.30 0.776
4hl5 15WTankyrase-2 2.4.2.30 0.772
4l2k 1V8Tankyrase-2 2.4.2.30 0.770
4hlg 20BTankyrase-2 2.4.2.30 0.769
4l32 1VFTankyrase-2 2.4.2.30 0.765
4hmh F94Tankyrase-2 2.4.2.30 0.762
4hkn LU2Tankyrase-2 2.4.2.30 0.758
4l2g 1V4Tankyrase-2 2.4.2.30 0.749
4bjb P34Tankyrase-2 2.4.2.30 0.745
4avu LDRTankyrase-2 2.4.2.30 0.733
4pnr G18Tankyrase-2 2.4.2.30 0.727
4gv4 MEJPoly [ADP-ribose] polymerase 3 2.4.2.30 0.726
4gv0 8MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.711
4mt9 2D6Tankyrase-1 2.4.2.30 0.708
4pnm NU1Tankyrase-2 2.4.2.30 0.705
4tjy 3GNTankyrase-2 2.4.2.30 0.702
3c49 KU8Poly [ADP-ribose] polymerase 3 2.4.2.30 0.697
4gv2 5MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.697
4r5w XAVPoly [ADP-ribose] polymerase 1 2.4.2.30 0.695
3c4h DRLPoly [ADP-ribose] polymerase 3 2.4.2.30 0.692
3u9y 09LTankyrase-2 2.4.2.30 0.692
4msk 2C8Tankyrase-1 2.4.2.30 0.691
4gv7 MEWPoly [ADP-ribose] polymerase 1 2.4.2.30 0.684
4li6 1XOTankyrase-1 2.4.2.30 0.684
4msg 2C6Tankyrase-1 2.4.2.30 0.681
4bjc RPBTankyrase-2 2.4.2.30 0.679
3gn7 3GNPoly [ADP-ribose] polymerase 1 2.4.2.30 0.674
4j3l AJ5Tankyrase-2 2.4.2.30 0.674
3l3m A92Poly [ADP-ribose] polymerase 1 2.4.2.30 0.673
4tkg 09LTankyrase-2 2.4.2.30 0.668
4hhz 15SPoly [ADP-ribose] polymerase 1 2.4.2.30 0.666
2rd6 78PPoly [ADP-ribose] polymerase 1 2.4.2.30 0.665
3p0p NNFTankyrase-2 2.4.2.30 0.661
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
4bj9 UHBTankyrase-2 2.4.2.30 0.660
4e5i 0N9Polymerase acidic protein / 0.660
4e5f 0N7Polymerase acidic protein / 0.659
4j3m AJ8Tankyrase-2 2.4.2.30 0.659
4iue AJ4Tankyrase-2 2.4.2.30 0.658
4tvj 09LPoly [ADP-ribose] polymerase 2 2.4.2.30 0.658
4li8 1XQTankyrase-1 2.4.2.30 0.655
1pax DHQPoly [ADP-ribose] polymerase 1 2.4.2.30 0.654
5ds3 09LPoly [ADP-ribose] polymerase 1 2.4.2.30 0.650