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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4bud 29F Tankyrase-2 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4bud 29FTankyrase-2 2.4.2.30 0.983
4bu9 08CTankyrase-2 2.4.2.30 0.921
4bux F35Tankyrase-2 2.4.2.30 0.892
4buv 16ITankyrase-2 2.4.2.30 0.883
4bus 32FTankyrase-2 2.4.2.30 0.882
4but 31FTankyrase-2 2.4.2.30 0.882
5aku 29FTankyrase-2 2.4.2.30 0.880
4bs4 A64Tankyrase-2 2.4.2.30 0.877
4buf F36Tankyrase-2 2.4.2.30 0.871
4bue JQFTankyrase-2 2.4.2.30 0.869
4l10 A63Tankyrase-2 2.4.2.30 0.854
4buu F38Tankyrase-2 2.4.2.30 0.852
4l0v 1V1Tankyrase-2 2.4.2.30 0.850
4kzu A73Tankyrase-2 2.4.2.30 0.848
4kzl 20DTankyrase-2 2.4.2.30 0.847
4buw F33Tankyrase-2 2.4.2.30 0.843
4l0s 1UZTankyrase-2 2.4.2.30 0.837
4l34 1VGTankyrase-2 2.4.2.30 0.837
4bui W2ETankyrase-2 2.4.2.30 0.836
4hlm 16STankyrase-2 2.4.2.30 0.836
4l09 1URTankyrase-2 2.4.2.30 0.836
4l33 F70Tankyrase-2 2.4.2.30 0.836
4l0t 1V0Tankyrase-2 2.4.2.30 0.835
4l0i 1UWTankyrase-2 2.4.2.30 0.828
3kr8 XAVTankyrase-2 2.4.2.30 0.823
4hlf 15ZTankyrase-2 2.4.2.30 0.819
4hki FLNTankyrase-2 2.4.2.30 0.813
4hlh 20DTankyrase-2 2.4.2.30 0.810
4l2k 1V8Tankyrase-2 2.4.2.30 0.806
4avw G18Tankyrase-2 2.4.2.30 0.804
4hlg 20BTankyrase-2 2.4.2.30 0.798
4hl5 15WTankyrase-2 2.4.2.30 0.797
4hlk 431Tankyrase-2 2.4.2.30 0.797
4hkk AGITankyrase-2 2.4.2.30 0.796
4l2f 1V3Tankyrase-2 2.4.2.30 0.780
4hkn LU2Tankyrase-2 2.4.2.30 0.778
4avu LDRTankyrase-2 2.4.2.30 0.777
4l32 1VFTankyrase-2 2.4.2.30 0.768
4l2g 1V4Tankyrase-2 2.4.2.30 0.766
4hmh F94Tankyrase-2 2.4.2.30 0.760
4bjb P34Tankyrase-2 2.4.2.30 0.738
3u9y 09LTankyrase-2 2.4.2.30 0.734
4gv0 8MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.734
4bjc RPBTankyrase-2 2.4.2.30 0.729
4msk 2C8Tankyrase-1 2.4.2.30 0.726
4r5w XAVPoly [ADP-ribose] polymerase 1 2.4.2.30 0.717
4gv4 MEJPoly [ADP-ribose] polymerase 3 2.4.2.30 0.716
4li6 1XOTankyrase-1 2.4.2.30 0.714
4pnr G18Tankyrase-2 2.4.2.30 0.702
3p0p NNFTankyrase-2 2.4.2.30 0.701
4msg 2C6Tankyrase-1 2.4.2.30 0.700
4pnm NU1Tankyrase-2 2.4.2.30 0.698
3c49 KU8Poly [ADP-ribose] polymerase 3 2.4.2.30 0.691
4gv2 5MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.691
3gn7 3GNPoly [ADP-ribose] polymerase 1 2.4.2.30 0.684
4li8 1XQTankyrase-1 2.4.2.30 0.682
3l3m A92Poly [ADP-ribose] polymerase 1 2.4.2.30 0.679
4tjy 3GNTankyrase-2 2.4.2.30 0.676
4gv7 MEWPoly [ADP-ribose] polymerase 1 2.4.2.30 0.675
5dsy UHBPoly [ADP-ribose] polymerase 2 2.4.2.30 0.667
5ewk P34Putative secreted protein / 0.666
4e5f 0N7Polymerase acidic protein / 0.665
4f1l 0RYPoly [ADP-ribose] polymerase 14 2.4.2.30 0.661
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
2rd6 78PPoly [ADP-ribose] polymerase 1 2.4.2.30 0.660
4l6s 1WQPoly [ADP-ribose] polymerase 1 2.4.2.30 0.659
2rcw AAIPoly [ADP-ribose] polymerase 1 2.4.2.30 0.655
4j3m AJ8Tankyrase-2 2.4.2.30 0.654
4j21 AJ6Tankyrase-2 2.4.2.30 0.652
4tkg 09LTankyrase-2 2.4.2.30 0.651
2uxu NARHTH-type transcriptional regulator TtgR / 0.650
4dgn LU2Casein kinase II subunit alpha 2.7.11.1 0.650