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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3u9y 09L Tankyrase-2 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3u9y 09LTankyrase-2 2.4.2.30 1.090
4tkg 09LTankyrase-2 2.4.2.30 0.919
4avu LDRTankyrase-2 2.4.2.30 0.796
4li8 1XQTankyrase-1 2.4.2.30 0.748
4bus 32FTankyrase-2 2.4.2.30 0.742
4but 31FTankyrase-2 2.4.2.30 0.740
4buv 16ITankyrase-2 2.4.2.30 0.740
4avw G18Tankyrase-2 2.4.2.30 0.737
4bud 29FTankyrase-2 2.4.2.30 0.734
4bux F35Tankyrase-2 2.4.2.30 0.729
4bu9 08CTankyrase-2 2.4.2.30 0.727
4hlm 16STankyrase-2 2.4.2.30 0.720
4msg 2C6Tankyrase-1 2.4.2.30 0.719
4gv0 8MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.714
4bjc RPBTankyrase-2 2.4.2.30 0.709
4buf F36Tankyrase-2 2.4.2.30 0.708
4buw F33Tankyrase-2 2.4.2.30 0.708
4bui W2ETankyrase-2 2.4.2.30 0.707
4gv2 5MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.706
4hlf 15ZTankyrase-2 2.4.2.30 0.706
4l09 1URTankyrase-2 2.4.2.30 0.706
4l2k 1V8Tankyrase-2 2.4.2.30 0.706
4l34 1VGTankyrase-2 2.4.2.30 0.706
4tjy 3GNTankyrase-2 2.4.2.30 0.706
4l0s 1UZTankyrase-2 2.4.2.30 0.705
4l10 A63Tankyrase-2 2.4.2.30 0.705
4l0t 1V0Tankyrase-2 2.4.2.30 0.704
4l33 F70Tankyrase-2 2.4.2.30 0.704
4bs4 A64Tankyrase-2 2.4.2.30 0.703
4kzl 20DTankyrase-2 2.4.2.30 0.703
4kzu A73Tankyrase-2 2.4.2.30 0.703
4gv4 MEJPoly [ADP-ribose] polymerase 3 2.4.2.30 0.701
4hki FLNTankyrase-2 2.4.2.30 0.701
3p0p NNFTankyrase-2 2.4.2.30 0.697
4bjb P34Tankyrase-2 2.4.2.30 0.695
4bue JQFTankyrase-2 2.4.2.30 0.694
4pnm NU1Tankyrase-2 2.4.2.30 0.694
4buu F38Tankyrase-2 2.4.2.30 0.692
5ds3 09LPoly [ADP-ribose] polymerase 1 2.4.2.30 0.688
4mt9 2D6Tankyrase-1 2.4.2.30 0.686
3c49 KU8Poly [ADP-ribose] polymerase 3 2.4.2.30 0.683
4hkk AGITankyrase-2 2.4.2.30 0.683
4pnr G18Tankyrase-2 2.4.2.30 0.682
5dsy UHBPoly [ADP-ribose] polymerase 2 2.4.2.30 0.680
4bj9 UHBTankyrase-2 2.4.2.30 0.678
4j3l AJ5Tankyrase-2 2.4.2.30 0.678
3gn7 3GNPoly [ADP-ribose] polymerase 1 2.4.2.30 0.676
4l32 1VFTankyrase-2 2.4.2.30 0.675
4msk 2C8Tankyrase-1 2.4.2.30 0.674
2rcw AAIPoly [ADP-ribose] polymerase 1 2.4.2.30 0.673
4i9i 1DYTankyrase-1 2.4.2.30 0.673
1efy BZCPoly [ADP-ribose] polymerase 1 2.4.2.30 0.671
4l31 F08Tankyrase-2 2.4.2.30 0.671
3l3m A92Poly [ADP-ribose] polymerase 1 2.4.2.30 0.669
4l0i 1UWTankyrase-2 2.4.2.30 0.669
2rd6 78PPoly [ADP-ribose] polymerase 1 2.4.2.30 0.668
4hkn LU2Tankyrase-2 2.4.2.30 0.668
4l0v 1V1Tankyrase-2 2.4.2.30 0.668
4gv7 MEWPoly [ADP-ribose] polymerase 1 2.4.2.30 0.667
4hlk 431Tankyrase-2 2.4.2.30 0.667
5ewk P34Putative secreted protein / 0.667
4hmh F94Tankyrase-2 2.4.2.30 0.666
3kr8 XAVTankyrase-2 2.4.2.30 0.665
4r5w XAVPoly [ADP-ribose] polymerase 1 2.4.2.30 0.663
1pax DHQPoly [ADP-ribose] polymerase 1 2.4.2.30 0.656
4l2f 1V3Tankyrase-2 2.4.2.30 0.656
5aku 29FTankyrase-2 2.4.2.30 0.656
4f1q 0RZPoly [ADP-ribose] polymerase 14 2.4.2.30 0.650