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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1if4 FBS Carbonic anhydrase 2 4.2.1.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1if4 FBSCarbonic anhydrase 2 4.2.1.1 0.837
2wej FB2Carbonic anhydrase 2 4.2.1.1 0.773
3nb5 R21Carbonic anhydrase 2 4.2.1.1 0.772
1kwr SG2Carbonic anhydrase 2 4.2.1.1 0.765
2weg FBVCarbonic anhydrase 2 4.2.1.1 0.765
2weo FBWCarbonic anhydrase 2 4.2.1.1 0.763
3mhi J90Carbonic anhydrase 2 4.2.1.1 0.762
3dc3 AZMCarbonic anhydrase 2 4.2.1.1 0.760
3v2j AZMCarbonic anhydrase 2 4.2.1.1 0.759
1kwq SG1Carbonic anhydrase 2 4.2.1.1 0.758
3ffp LC1Carbonic anhydrase 2 4.2.1.1 0.758
4ito MPXCarbonic anhydrase 2 4.2.1.1 0.753
3mna DWHCarbonic anhydrase 2 4.2.1.1 0.751
3ml2 SU0Carbonic anhydrase 2 4.2.1.1 0.744
2q1q OSPCarbonic anhydrase 2 4.2.1.1 0.743
3igp DT7Carbonic anhydrase 2 4.2.1.1 0.743
4xiw AZMCarbonic anhydrase, alpha type / 0.742
3mmf D9HCarbonic anhydrase 2 4.2.1.1 0.741
4x5s AZMCarbonic anhydrase (Carbonate dehydratase) / 0.741
4ilx 1EZCarbonic anhydrase 2 4.2.1.1 0.739
4uov AZMCarbonate dehydratase / 0.739
3fw3 ETSCarbonic anhydrase 4 4.2.1.1 0.738
1rj6 AZMCarbonic anhydrase 14 4.2.1.1 0.736
3kig DA4Carbonic anhydrase 2 4.2.1.1 0.736
3mhl J71Carbonic anhydrase 2 4.2.1.1 0.736
3mzc S6ICarbonic anhydrase 2 4.2.1.1 0.734
3n3j WWVCarbonic anhydrase 2 4.2.1.1 0.734
1if7 SBRCarbonic anhydrase 2 4.2.1.1 0.733
3oys OYSCarbonic anhydrase 2 4.2.1.1 0.724
4kp8 E1GCarbonic anhydrase 12 4.2.1.1 0.723
3n0n P9BCarbonic anhydrase 2 4.2.1.1 0.722
4lu3 AZMCarbonic anhydrase 14 4.2.1.1 0.722
1zsb AZMCarbonic anhydrase 2 4.2.1.1 0.721
3qyk IE2Carbonic anhydrase 2 4.2.1.1 0.721
2nmx M25Carbonic anhydrase 1 4.2.1.1 0.718
3dd0 EZLCarbonic anhydrase 2 4.2.1.1 0.718
3n4b WWZCarbonic anhydrase 2 4.2.1.1 0.718
3m2n J74Carbonic anhydrase 2 4.2.1.1 0.717
1bnw TPDCarbonic anhydrase 2 4.2.1.1 0.716
3n2p AYXCarbonic anhydrase 2 4.2.1.1 0.715
3dbu D8WCarbonic anhydrase 2 4.2.1.1 0.714
4k13 ETSCarbonic anhydrase 2 4.2.1.1 0.714
1bnt AL2Carbonic anhydrase 2 4.2.1.1 0.713
1i9n IOACarbonic anhydrase 2 4.2.1.1 0.713
3b4f TUOCarbonic anhydrase 2 4.2.1.1 0.713
3oyq OYQCarbonic anhydrase 2 4.2.1.1 0.712
3sbi E90Carbonic anhydrase 2 4.2.1.1 0.712
1cil ETSCarbonic anhydrase 2 4.2.1.1 0.711
1i91 INQCarbonic anhydrase 2 4.2.1.1 0.711
4bf6 X0QCarbonic anhydrase 2 4.2.1.1 0.711
3m2y BE0Carbonic anhydrase 2 4.2.1.1 0.710
1bnu AL3Carbonic anhydrase 2 4.2.1.1 0.709
1jd0 AZMCarbonic anhydrase 12 4.2.1.1 0.708
3dcw EZLCarbonic anhydrase 2 4.2.1.1 0.708
1dmy AZMCarbonic anhydrase 5A, mitochondrial 4.2.1.1 0.707
1g4j FFBCarbonic anhydrase 2 4.2.1.1 0.707
3dcs MZMCarbonic anhydrase 2 4.2.1.1 0.707
1if8 SBSCarbonic anhydrase 2 4.2.1.1 0.706
1bzm MZMCarbonic anhydrase 1 4.2.1.1 0.705
1g4o BSBCarbonic anhydrase 2 4.2.1.1 0.705
3s8x E59Carbonic anhydrase 2 4.2.1.1 0.705
1g45 FSBCarbonic anhydrase 2 4.2.1.1 0.704
3mhc ARZCarbonic anhydrase 2 4.2.1.1 0.704
1g1d FSBCarbonic anhydrase 2 4.2.1.1 0.703
3hku TORCarbonic anhydrase 2 4.2.1.1 0.703
3m40 J45Carbonic anhydrase 2 4.2.1.1 0.702
4bf1 9FKCarbonic anhydrase 2 4.2.1.1 0.702
3d8w D8WCarbonic anhydrase 2 4.2.1.1 0.701
4ht2 V50Carbonic anhydrase 12 4.2.1.1 0.701
1bn3 AL6Carbonic anhydrase 2 4.2.1.1 0.700
1i9q IOFCarbonic anhydrase 2 4.2.1.1 0.700
1if6 FBUCarbonic anhydrase 2 4.2.1.1 0.700
1oq5 CELCarbonic anhydrase 2 4.2.1.1 0.700
1bnv AL7Carbonic anhydrase 2 4.2.1.1 0.699
3znc BZ1Carbonic anhydrase 4 4.2.1.1 0.699
1i8z INLCarbonic anhydrase 2 4.2.1.1 0.698
3dcc D9ZCarbonic anhydrase 2 4.2.1.1 0.698
4dz7 D02Carbonic anhydrase 2 4.2.1.1 0.698
4m2r BZ1Carbonic anhydrase 2 4.2.1.1 0.698
4m2v BZ1Carbonic anhydrase 2 4.2.1.1 0.698
4itp 1GDCarbonic anhydrase 2 4.2.1.1 0.697
4iwz 1GOCarbonic anhydrase 2 4.2.1.1 0.696
1bnm AL8Carbonic anhydrase 2 4.2.1.1 0.695
1bnn AL1Carbonic anhydrase 2 4.2.1.1 0.695
3d9z D9ZCarbonic anhydrase 2 4.2.1.1 0.695
3mho J43Carbonic anhydrase 2 4.2.1.1 0.695
1cnw EG1Carbonic anhydrase 2 4.2.1.1 0.693
4k0z MZMCarbonic anhydrase 2 4.2.1.1 0.693
2nn7 M29Carbonic anhydrase 1 4.2.1.1 0.690
1cny EG3Carbonic anhydrase 2 4.2.1.1 0.689
2h15 B19Carbonic anhydrase 2 4.2.1.1 0.688
1xpz 4TZCarbonic anhydrase 2 4.2.1.1 0.687
3k2f NKXCarbonic anhydrase 2 4.2.1.1 0.686
1bn1 AL5Carbonic anhydrase 2 4.2.1.1 0.685
1eou SMSCarbonic anhydrase 2 4.2.1.1 0.685
3f7b AG5Carbonic anhydrase 4 4.2.1.1 0.683
2h4n AZMCarbonic anhydrase 2 4.2.1.1 0.682
3po6 DT9Carbonic anhydrase 2 4.2.1.1 0.682
1i9p IOECarbonic anhydrase 2 4.2.1.1 0.681
1okm SABCarbonic anhydrase 2 4.2.1.1 0.680
1a42 BZUCarbonic anhydrase 2 4.2.1.1 0.679
1g52 F2BCarbonic anhydrase 2 4.2.1.1 0.677
3m5e JDRCarbonic anhydrase 2 4.2.1.1 0.671
4k0t D9ZCarbonic anhydrase 2 4.2.1.1 0.671
1g54 FFBCarbonic anhydrase 2 4.2.1.1 0.669
2wd2 MS5Carbonic anhydrase 2 4.2.1.1 0.669
3lxe TORCarbonic anhydrase 1 4.2.1.1 0.669
3ni5 C1HCarbonic anhydrase 2 4.2.1.1 0.669
5fl4 9FKCarbonic anhydrase 9 4.2.1.1 0.668
1xq0 4TRCarbonic anhydrase 2 4.2.1.1 0.666
3dd8 2C7Carbonic anhydrase 2 4.2.1.1 0.665
3l14 I7BCarbonic anhydrase 2 4.2.1.1 0.662
3daz MZMCarbonic anhydrase 2 4.2.1.1 0.661
3f7u AG4Carbonic anhydrase 4 4.2.1.1 0.657
3sbh E65Carbonic anhydrase 2 4.2.1.1 0.656
3f4x KLTCarbonic anhydrase 2 4.2.1.1 0.654
1okn STBCarbonic anhydrase 2 4.2.1.1 0.653
2eu3 FF3Carbonic anhydrase 2 4.2.1.1 0.652
2x7t WZBCarbonic anhydrase 2 4.2.1.1 0.652