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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3iggEFQCyclin-dependent kinase 22.7.11.22

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3iggEFQCyclin-dependent kinase 22.7.11.221.000
4ek816KCyclin-dependent kinase 22.7.11.220.555
2r3kSCQCyclin-dependent kinase 22.7.11.220.551
3qwjX6ACyclin-dependent kinase 22.7.11.220.544
3r1yX76Cyclin-dependent kinase 22.7.11.220.539
4kd11QKCyclin-dependent kinase 22.7.11.220.533
2r3jSCJCyclin-dependent kinase 22.7.11.220.532
3r7yZ04Cyclin-dependent kinase 22.7.11.220.529
4fks46KCyclin-dependent kinase 22.7.11.220.528
4acm7YGCyclin-dependent kinase 22.7.11.220.527
2c6o4SPCyclin-dependent kinase 22.7.11.220.525
2btrU73Cyclin-dependent kinase 22.7.11.220.522
3r8lZ30Cyclin-dependent kinase 22.7.11.220.521
3qtrX36Cyclin-dependent kinase 22.7.11.220.520
4fkq42KCyclin-dependent kinase 22.7.11.220.517
2a0cCK9Cyclin-dependent kinase 22.7.11.220.516
3r71X86Cyclin-dependent kinase 22.7.11.220.516
3rpv26ZCyclin-dependent kinase 22.7.11.220.515
3r83Z14Cyclin-dependent kinase 22.7.11.220.514
3lfnA27Cyclin-dependent kinase 22.7.11.220.512
3qqhX0ACyclin-dependent kinase 22.7.11.220.511
3qxoX65Cyclin-dependent kinase 22.7.11.220.510
3qzgX67Cyclin-dependent kinase 22.7.11.220.507
3r9dX6BCyclin-dependent kinase 22.7.11.220.506
4fkpLS5Cyclin-dependent kinase 22.7.11.220.506
3qqlX03Cyclin-dependent kinase 22.7.11.220.505
3r8pZ46Cyclin-dependent kinase 22.7.11.220.504
1ykr628Cyclin-dependent kinase 22.7.11.220.503
4fkg4CKCyclin-dependent kinase 22.7.11.220.503
3rk708ZCyclin-dependent kinase 22.7.11.220.502
3r8vZ62Cyclin-dependent kinase 22.7.11.220.501
3rpo24ZCyclin-dependent kinase 22.7.11.220.501
1oirHDYCyclin-dependent kinase 22.7.11.220.500
3lfqA28Cyclin-dependent kinase 22.7.11.220.500
2w06FRVCyclin-dependent kinase 22.7.11.220.497
1pxlCK4Cyclin-dependent kinase 22.7.11.220.494
4fki09KCyclin-dependent kinase 22.7.11.220.494
3rahO1ZCyclin-dependent kinase 22.7.11.220.492
3rjc06ZCyclin-dependent kinase 22.7.11.220.492
3qu0X40Cyclin-dependent kinase 22.7.11.220.491
3rk909ZCyclin-dependent kinase 22.7.11.220.490
1pxmCK5Cyclin-dependent kinase 22.7.11.220.489
3r1sX73Cyclin-dependent kinase 22.7.11.220.488
1w8cN69Cyclin-dependent kinase 22.7.11.220.486
3rm719ZCyclin-dependent kinase 22.7.11.220.486
3qruX19Cyclin-dependent kinase 22.7.11.220.485
1w0xOLOCyclin-dependent kinase 22.7.11.220.484
2vtiLZ3Cyclin-dependent kinase 22.7.11.220.484
1y91CT9Cyclin-dependent kinase 22.7.11.220.483
1h0w207Cyclin-dependent kinase 22.7.11.220.482
2r3p3SCCyclin-dependent kinase 22.7.11.220.481
3ezrEZRCyclin-dependent kinase 22.7.11.220.481
3r73X87Cyclin-dependent kinase 22.7.11.220.481
3qqkX02Cyclin-dependent kinase 22.7.11.220.479
1b38ATPCyclin-dependent kinase 22.7.11.220.478
3rni21ZCyclin-dependent kinase 22.7.11.220.478
1oitHDTCyclin-dependent kinase 22.7.11.220.474
1pxoCK7Cyclin-dependent kinase 22.7.11.220.473
3fz1B98Cyclin-dependent kinase 22.7.11.220.473
2c6iDT1Cyclin-dependent kinase 22.7.11.220.472
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.472
4fklCK2Cyclin-dependent kinase 22.7.11.220.470
3rm618ZCyclin-dependent kinase 22.7.11.220.469
2xmyCDKCyclin-dependent kinase 22.7.11.220.468
1ckpPVBCyclin-dependent kinase 22.7.11.220.467
3sqq99ZCyclin-dependent kinase 22.7.11.220.467
2r3mSCXCyclin-dependent kinase 22.7.11.220.466
2r3o2SCCyclin-dependent kinase 22.7.11.220.466
1e1xNW1Cyclin-dependent kinase 22.7.11.220.465
2a4lRRCCyclin-dependent kinase 22.7.11.220.465
2vv9IM9Cyclin-dependent kinase 22.7.11.220.465
3ig7EFPCyclin-dependent kinase 22.7.11.220.465
1b39ATPCyclin-dependent kinase 22.7.11.220.464
4fkv61KCyclin-dependent kinase 22.7.11.220.464
2btsU32Cyclin-dependent kinase 22.7.11.220.463
3qtuX44Cyclin-dependent kinase 22.7.11.220.463
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.462
4fkt48KCyclin-dependent kinase 22.7.11.220.462
1g5sI17Cyclin-dependent kinase 22.7.11.220.461
2r64740Cyclin-dependent kinase 22.7.11.220.461
2uzoC62Cyclin-dependent kinase 22.7.11.220.461
4fkr45KCyclin-dependent kinase 22.7.11.220.461
3rak03ZCyclin-dependent kinase 22.7.11.220.460
3s0o50ZCyclin-dependent kinase 22.7.11.220.460
2r3lSCWCyclin-dependent kinase 22.7.11.220.459
1ke5LS1Cyclin-dependent kinase 22.7.11.220.458
2exmZIPCyclin-dependent kinase 22.7.11.220.458
2r3r6SCCyclin-dependent kinase 22.7.11.220.458
3qqfX07Cyclin-dependent kinase 22.7.11.220.458
3qtzX42Cyclin-dependent kinase 22.7.11.220.458
4ek610KCyclin-dependent kinase 22.7.11.220.457
1gii1PUCyclin-dependent kinase 22.7.11.220.456
3qtxX43Cyclin-dependent kinase 22.7.11.220.456
4lyn1YGCyclin-dependent kinase 22.7.11.220.456
3lfsA07Cyclin-dependent kinase 22.7.11.220.455
3s2pPMUCyclin-dependent kinase 22.7.11.220.455
3r6xX84Cyclin-dependent kinase 22.7.11.220.454
3rkb12ZCyclin-dependent kinase 22.7.11.220.454
4bgh3I6Cyclin-dependent kinase 22.7.11.220.454
2vttLZDCyclin-dependent kinase 22.7.11.220.453
3qx2X63Cyclin-dependent kinase 22.7.11.220.453
3s1h56ZCyclin-dependent kinase 22.7.11.220.452
3unk0BYCyclin-dependent kinase 22.7.11.220.452
2vtjLZ4Cyclin-dependent kinase 22.7.11.220.451
3r9hZ67Cyclin-dependent kinase 22.7.11.220.451
2vthLZ2Cyclin-dependent kinase 22.7.11.220.450
3raiX85Cyclin-dependent kinase 22.7.11.220.450
4fkj11KCyclin-dependent kinase 22.7.11.220.450
1pxpCK8Cyclin-dependent kinase 22.7.11.220.449
3pj8404Cyclin-dependent kinase 22.7.11.220.448
2r3fSC8Cyclin-dependent kinase 22.7.11.220.447
3sw418KCyclin-dependent kinase 22.7.11.220.447
1p2a5BNCyclin-dependent kinase 22.7.11.220.446
1v1k3FPCyclin-dependent kinase 22.7.11.220.446
2b52D42Cyclin-dependent kinase 22.7.11.220.446
4eon1ROCyclin-dependent kinase 22.7.11.220.445
2w1hL0FCyclin-dependent kinase 22.7.11.220.444
3qzhX69Cyclin-dependent kinase 22.7.11.220.442
3roy22ZCyclin-dependent kinase 22.7.11.220.441
2r3gSC9Cyclin-dependent kinase 22.7.11.220.440
3ezvEZVCyclin-dependent kinase 22.7.11.220.440