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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1hszNADAlcohol dehydrogenase 1B1.1.1.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1hszNADAlcohol dehydrogenase 1B1.1.1.11.000
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.635
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.628
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.628
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.617
2ohxNADAlcohol dehydrogenase E chain1.1.1.10.612
1hldNADAlcohol dehydrogenase E chain1.1.1.10.592
1axgNADAlcohol dehydrogenase E chain1.1.1.10.589
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.588
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.586
1adcPADAlcohol dehydrogenase E chain1.1.1.10.571
2oxiNADAlcohol dehydrogenase E chain1.1.1.10.557
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.555
1a71NADAlcohol dehydrogenase E chain1.1.1.10.551
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.534
1mgoNADAlcohol dehydrogenase E chain1.1.1.10.534
5cdsNAJAlcohol dehydrogenase E chain1.1.1.10.529
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.526
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.525
1axeNADAlcohol dehydrogenase E chain1.1.1.10.516
4jjiNADAlcohol dehydrogenase class-3/0.514
4cpdNADAlcohol dehydrogenase/0.511
1hetNADAlcohol dehydrogenase E chain1.1.1.10.502
4dl9NADS-(hydroxymethyl)glutathione dehydrogenase/0.496
4c4oNADSADH/0.494
2fzeAPRAlcohol dehydrogenase class-31.1.1.10.489
4gl4NAIAlcohol dehydrogenase class-3/0.488
5kj6NAJAlcohol dehydrogenase E chain1.1.1.10.487
1e3lNADAlcohol dehydrogenase 41.1.1.10.483
5cdtNAJAlcohol dehydrogenase E chain1.1.1.10.481
5kcpNAJAlcohol dehydrogenase E chain1.1.1.10.473
1hdzNADAlcohol dehydrogenase 1B1.1.1.10.472
1cdoNADAlcohol dehydrogenase 11.1.1.10.463
1p0fNAPNADP-dependent alcohol dehydrogenase1.1.1.20.463
4gkvNADAlcohol dehydrogenase, propanol-preferring1.1.1.10.462
3ukoNADAlcohol dehydrogenase class-3/0.459
5kj1NAJAlcohol dehydrogenase E chain1.1.1.10.456
5kjfNAJAlcohol dehydrogenase E chain1.1.1.10.450
3jv7NADSecondary alcohol dehydrogenase/0.445
4nfsNAJAlcohol dehydrogenase E chain1.1.1.10.445
2xaaNADSecondary alcohol dehydrogenase/0.443