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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1hdzNADAlcohol dehydrogenase 1B1.1.1.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1hdzNADAlcohol dehydrogenase 1B1.1.1.11.000
1hszNADAlcohol dehydrogenase 1B1.1.1.10.597
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.585
2ohxNADAlcohol dehydrogenase E chain1.1.1.10.580
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.578
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.567
1mgoNADAlcohol dehydrogenase E chain1.1.1.10.565
1axeNADAlcohol dehydrogenase E chain1.1.1.10.564
2oxiNADAlcohol dehydrogenase E chain1.1.1.10.562
1a71NADAlcohol dehydrogenase E chain1.1.1.10.561
5cdsNAJAlcohol dehydrogenase E chain1.1.1.10.551
2fzeAPRAlcohol dehydrogenase class-31.1.1.10.547
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.547
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.544
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.542
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.542
1adcPADAlcohol dehydrogenase E chain1.1.1.10.540
1axgNADAlcohol dehydrogenase E chain1.1.1.10.529
4dl9NADS-(hydroxymethyl)glutathione dehydrogenase/0.525
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.523
4jjiNADAlcohol dehydrogenase class-3/0.523
1hldNADAlcohol dehydrogenase E chain1.1.1.10.518
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.510
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.509
4c4oNADSADH/0.506
4cpdNADAlcohol dehydrogenase/0.495
1cdoNADAlcohol dehydrogenase 11.1.1.10.492
4gkvNADAlcohol dehydrogenase, propanol-preferring1.1.1.10.492
1e3lNADAlcohol dehydrogenase 41.1.1.10.478
1p0fNAPNADP-dependent alcohol dehydrogenase1.1.1.20.475
4gl4NAIAlcohol dehydrogenase class-3/0.475
1ma0NADAlcohol dehydrogenase class-31.1.1.10.471
1h2bNAJNAD-dependent alcohol dehydrogenase/0.468
3jv7NADSecondary alcohol dehydrogenase/0.464
2xaaNADSecondary alcohol dehydrogenase/0.463
2gsdNADFormate dehydrogenase/0.455
1f8fNADBenzyl alcohol dehydrogenase/0.454
1r37NADNAD-dependent alcohol dehydrogenase1.1.1.10.452
2g5cNADPrephenate dehydrogenase/0.452
4xyeNADFormate dehydrogenase/0.450
1kolNADGlutathione-independent formaldehyde dehydrogenase/0.449
5envNADAlcohol dehydrogenase 11.1.1.10.449
1lluNADAlcohol dehydrogenase/0.444
2vhvNAIAlanine dehydrogenase1.4.1.10.442
1c1dNAIPhenylalanine dehydrogenase/0.441
5a1tNAIL-lactate dehydrogenase/0.441
2hjrAPRMalate dehydrogenase, adjacent gene encodes predicted lactate dehydrogenase/0.440