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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4gv4 MEJ Poly [ADP-ribose] polymerase 3 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4gv4 MEJPoly [ADP-ribose] polymerase 3 2.4.2.30 1.024
4gv0 8MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.920
4gv2 5MEPoly [ADP-ribose] polymerase 3 2.4.2.30 0.874
3c4h DRLPoly [ADP-ribose] polymerase 3 2.4.2.30 0.768
4avw G18Tankyrase-2 2.4.2.30 0.749
4but 31FTankyrase-2 2.4.2.30 0.742
4buw F33Tankyrase-2 2.4.2.30 0.742
4bux F35Tankyrase-2 2.4.2.30 0.742
4bus 32FTankyrase-2 2.4.2.30 0.740
4r5w XAVPoly [ADP-ribose] polymerase 1 2.4.2.30 0.734
4bue JQFTankyrase-2 2.4.2.30 0.728
4buu F38Tankyrase-2 2.4.2.30 0.726
4buv 16ITankyrase-2 2.4.2.30 0.726
5ds3 09LPoly [ADP-ribose] polymerase 1 2.4.2.30 0.726
4pnm NU1Tankyrase-2 2.4.2.30 0.720
4pnr G18Tankyrase-2 2.4.2.30 0.720
4bud 29FTankyrase-2 2.4.2.30 0.716
4gv7 MEWPoly [ADP-ribose] polymerase 1 2.4.2.30 0.708
4hlm 16STankyrase-2 2.4.2.30 0.704
4l34 1VGTankyrase-2 2.4.2.30 0.704
4l0s 1UZTankyrase-2 2.4.2.30 0.702
4l10 A63Tankyrase-2 2.4.2.30 0.702
3u9y 09LTankyrase-2 2.4.2.30 0.701
4kzu A73Tankyrase-2 2.4.2.30 0.701
4bu9 08CTankyrase-2 2.4.2.30 0.700
4kzl 20DTankyrase-2 2.4.2.30 0.700
3l3m A92Poly [ADP-ribose] polymerase 1 2.4.2.30 0.699
4bjb P34Tankyrase-2 2.4.2.30 0.697
4l2f 1V3Tankyrase-2 2.4.2.30 0.694
2rcw AAIPoly [ADP-ribose] polymerase 1 2.4.2.30 0.693
4bui W2ETankyrase-2 2.4.2.30 0.691
4l0t 1V0Tankyrase-2 2.4.2.30 0.691
4buf F36Tankyrase-2 2.4.2.30 0.690
4bs4 A64Tankyrase-2 2.4.2.30 0.689
5aku 29FTankyrase-2 2.4.2.30 0.688
4hlg 20BTankyrase-2 2.4.2.30 0.687
4hlf 15ZTankyrase-2 2.4.2.30 0.685
1pax DHQPoly [ADP-ribose] polymerase 1 2.4.2.30 0.681
4hlh 20DTankyrase-2 2.4.2.30 0.681
3kr8 XAVTankyrase-2 2.4.2.30 0.680
3l3l L3LPoly [ADP-ribose] polymerase 1 2.4.2.30 0.679
4hki FLNTankyrase-2 2.4.2.30 0.679
5dsy UHBPoly [ADP-ribose] polymerase 2 2.4.2.30 0.678
4bjc RPBTankyrase-2 2.4.2.30 0.677
4tvj 09LPoly [ADP-ribose] polymerase 2 2.4.2.30 0.673
4hl5 15WTankyrase-2 2.4.2.30 0.672
4hkk AGITankyrase-2 2.4.2.30 0.671
4hlk 431Tankyrase-2 2.4.2.30 0.670
4l2k 1V8Tankyrase-2 2.4.2.30 0.668
4l0v 1V1Tankyrase-2 2.4.2.30 0.666
4l33 F70Tankyrase-2 2.4.2.30 0.666
3ce0 P34Poly [ADP-ribose] polymerase 3 2.4.2.30 0.665
4f1q 0RZPoly [ADP-ribose] polymerase 14 2.4.2.30 0.665
4tkg 09LTankyrase-2 2.4.2.30 0.665
4hkn LU2Tankyrase-2 2.4.2.30 0.663
5ewk P34Putative secreted protein / 0.660
4bj9 UHBTankyrase-2 2.4.2.30 0.654
1uk1 FRQPoly [ADP-ribose] polymerase 1 2.4.2.30 0.652