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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
5kjfNAJAlcohol dehydrogenase E chain1.1.1.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
5kjfNAJAlcohol dehydrogenase E chain1.1.1.11.000
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.882
5kjcNAJAlcohol dehydrogenase E chain1.1.1.10.809
5kjeNAJAlcohol dehydrogenase E chain1.1.1.10.807
3oq6NAJAlcohol dehydrogenase E chain1.1.1.10.765
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.737
5kczNAJAlcohol dehydrogenase E chain1.1.1.10.729
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.677
5cdgNAJAlcohol dehydrogenase E chain1.1.1.10.638
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.617
1a71NADAlcohol dehydrogenase E chain1.1.1.10.613
1adcPADAlcohol dehydrogenase E chain1.1.1.10.592
4dxhNAJAlcohol dehydrogenase E chain1.1.1.10.590
5kj6NAJAlcohol dehydrogenase E chain1.1.1.10.588
2oxiNADAlcohol dehydrogenase E chain1.1.1.10.580
1hetNADAlcohol dehydrogenase E chain1.1.1.10.572
5kcpNAJAlcohol dehydrogenase E chain1.1.1.10.569
2ohxNADAlcohol dehydrogenase E chain1.1.1.10.564
1axeNADAlcohol dehydrogenase E chain1.1.1.10.556
4nfsNAJAlcohol dehydrogenase E chain1.1.1.10.555
5cdtNAJAlcohol dehydrogenase E chain1.1.1.10.544
5kj1NAJAlcohol dehydrogenase E chain1.1.1.10.532
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.527
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.521
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.503
1axgNADAlcohol dehydrogenase E chain1.1.1.10.501
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.500
3jv7NADSecondary alcohol dehydrogenase/0.500
6adhNADAlcohol dehydrogenase E chain1.1.1.10.500
1hldNADAlcohol dehydrogenase E chain1.1.1.10.496
1hszNADAlcohol dehydrogenase 1B1.1.1.10.495
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.491
1ju9NADAlcohol dehydrogenase E chain1.1.1.10.478
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.477
1a72PADAlcohol dehydrogenase E chain1.1.1.10.473
4rquNADAlcohol dehydrogenase class-P/0.473
5adhAPRAlcohol dehydrogenase E chain1.1.1.10.471
2fzeAPRAlcohol dehydrogenase class-31.1.1.10.461
1e3lNADAlcohol dehydrogenase 41.1.1.10.443
4cpdNADAlcohol dehydrogenase/0.443