Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4c67L5SBromodomain-containing protein 4

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4c67L5SBromodomain-containing protein 4/1.000
2yelWSHBromodomain-containing protein 4/0.621
4bjx73BBromodomain-containing protein 4/0.607
4hxr1A4Bromodomain-containing protein 4/0.581
4uyf73BBromodomain-containing protein 2/0.572
4alhA9PBromodomain-containing protein 2/0.570
4aknS5BBromodomain-containing protein 2/0.559
4j3i1K0Bromodomain-containing protein 4/0.558
4lr61XABromodomain-containing protein 4/0.556
4hbw14ZBromodomain-containing protein 4/0.552
4men25KBromodomain-containing protein 4/0.540
4hxs1A3Bromodomain-containing protein 4/0.539
5bt52LOBromodomain-containing protein 2/0.536
4a9oA9OBromodomain-containing protein 2/0.535
4j1p1K0Bromodomain-containing protein 2/0.526
4nr82LLBromodomain-containing protein 4/0.526
4hxm1A8Bromodomain-containing protein 4/0.519
4gpj0Q1Bromodomain-containing protein 4/0.517
4a9lP9LBromodomain-containing protein 4/0.513
4a9iP9IBromodomain-containing protein 2/0.510
4mr41K0Bromodomain-containing protein 4/0.506
3aqaBYHBromodomain-containing protein 2/0.503
4py6R78Bromodomain protein, putative/0.503
4mep24YBromodomain-containing protein 4/0.501
4uyg73BBromodomain-containing protein 2/0.498
4lyw21QBromodomain-containing protein 4/0.497
4bw1S5BBromodomain-containing protein 4/0.495
4j0s1H3Bromodomain-containing protein 4/0.495
4nqmY1ZBromodomain-containing protein 4/0.495
4o71CPBBromodomain-containing protein 4/0.492
2ydwWSHBromodomain-containing protein 2/0.491
4lrg1XBBromodomain-containing protein 4/0.491
4flpJQ1Bromodomain testis-specific protein/0.490
4a9mP9MBromodomain-containing protein 2/0.489
4a9nA9NBromodomain-containing protein 2/0.488
4c66H4CBromodomain-containing protein 4/0.487
4hxn1A7Bromodomain-containing protein 4/0.486
4cfkLY2Bromodomain-containing protein 4/0.484
4nyv15ECREB-binding protein/0.478
4hby13FBromodomain-containing protein 4/0.477
4mr61K0Bromodomain-containing protein 2/0.476
4meq25OBromodomain-containing protein 4/0.475
3zyu1GHBromodomain-containing protein 4/0.474
4o74R78Bromodomain-containing protein 4/0.473
4ogiR78Bromodomain-containing protein 4/0.473
4j0r1H2Bromodomain-containing protein 4/0.471
4hxo1A6Bromodomain-containing protein 4/0.468
4f3i0S6Bromodomain-containing protein 4/0.466
4nyw2O3CREB-binding protein/0.465
4qzsJQ1Bromodomain-containing protein 4/0.462
4ir5IR5Bromodomain adjacent to zinc finger domain protein 2B/0.460
5dfcEAMBromodomain-containing protein 2/0.458
4meo25VBromodomain-containing protein 4/0.455
2yemWSHBromodomain-containing protein 4/0.452
4bw39BMBromodomain-containing protein 4/0.452
4e960NSBromodomain-containing protein 4/0.452
4nr52LLCREB-binding protein/0.452
4o78SAVBromodomain-containing protein 4/0.452
4alg1GHBromodomain-containing protein 2/0.451
1qlhNADAlcohol dehydrogenase E chain1.1.1.10.445
4bw2UTHBromodomain-containing protein 4/0.442
4mr51K0Bromodomain-containing protein 2/0.442
2ejvNADL-threonine 3-dehydrogenase/0.440
2qblCAMCamphor 5-monooxygenase1.14.15.10.440