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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3p0pNNFTankyrase-22.4.2.30

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity
Align
3p0pNNFTankyrase-22.4.2.301.000
4l0i1UWTankyrase-22.4.2.300.643
4iueAJ4Tankyrase-22.4.2.300.620
4l33F70Tankyrase-22.4.2.300.617
4hlf15ZTankyrase-22.4.2.300.616
4bueJQFTankyrase-22.4.2.300.611
4l321VFTankyrase-22.4.2.300.609
4buxF35Tankyrase-22.4.2.300.604
4bus32FTankyrase-22.4.2.300.599
4l0t1V0Tankyrase-22.4.2.300.598
4l0v1V1Tankyrase-22.4.2.300.596
4hlh20DTankyrase-22.4.2.300.589
4kzl20DTankyrase-22.4.2.300.586
4bufF36Tankyrase-22.4.2.300.584
4hl515WTankyrase-22.4.2.300.582
4l2f1V3Tankyrase-22.4.2.300.577
4l2g1V4Tankyrase-22.4.2.300.575
4avwG18Tankyrase-22.4.2.300.566
4bs4A64Tankyrase-22.4.2.300.561
4pnrG18Tankyrase-22.4.2.300.561
5aku29FTankyrase-22.4.2.300.560
4hkiFLNTankyrase-22.4.2.300.557
4hmhF94Tankyrase-22.4.2.300.555
4hlm16STankyrase-22.4.2.300.554
4krs1SXTankyrase-12.4.2.300.554
4l2k1V8Tankyrase-22.4.2.300.553
4j21AJ6Tankyrase-22.4.2.300.548
4hlk431Tankyrase-22.4.2.300.547
4buwF33Tankyrase-22.4.2.300.541
4hknLU2Tankyrase-22.4.2.300.539
4tkg09LTankyrase-22.4.2.300.521
4bj9UHBTankyrase-22.4.2.300.516
4hyf1AKTankyrase-22.4.2.300.506
4pnmNU1Tankyrase-22.4.2.300.504
4msk2C8Tankyrase-12.4.2.300.496
4l091URTankyrase-22.4.2.300.491
4bjbP34Tankyrase-22.4.2.300.487
4j3lAJ5Tankyrase-22.4.2.300.480
4tjy3GNTankyrase-22.4.2.300.477
4i9i1DYTankyrase-12.4.2.300.471
4li61XOTankyrase-12.4.2.300.467
1efyBZCPoly [ADP-ribose] polymerase 12.4.2.300.466
3rsv3RSBeta-secretase 13.4.23.460.466
3l3mA92Poly [ADP-ribose] polymerase 12.4.2.300.461
2bf7HBIPteridine reductase 11.5.1.330.460
3aivHBO4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase, chloroplastic3.2.1.1820.460
2bfaCB3Pteridine reductase 11.5.1.330.459
4k4eK4ETankyrase-12.4.2.300.459
3qpnPFKcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.454
1paxDHQPoly [ADP-ribose] polymerase 12.4.2.300.451
3qpoPFRcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.449
4fcb0T7cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.447
2dw4FADLysine-specific histone demethylase 1A10.446
4buv16ITankyrase-22.4.2.300.445
4fcd0T6cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.444
3gn73GNPoly [ADP-ribose] polymerase 12.4.2.300.442
3qppPFWcAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A3.1.4.170.442
4phlPILPhosphodiesterase/0.441
4avuLDRTankyrase-22.4.2.300.440