Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ag6PAJPantothenate synthetase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3ag6PAJPantothenate synthetase/1.000
3ioeA7DPantothenate synthetase6.3.2.10.585
3iobA4DPantothenate synthetase6.3.2.10.564
1n2hPAJPantothenate synthetase6.3.2.10.559
2x3fAPCPantothenate synthetase/0.558
3iocA5DPantothenate synthetase6.3.2.10.557
3coz54HPantothenate synthetase6.3.2.10.555
3iodA6DPantothenate synthetase6.3.2.10.554
3ivxFG6Pantothenate synthetase6.3.2.10.553
3isjA8DPantothenate synthetase6.3.2.10.551
4ddhMS0Pantothenate synthetase6.3.2.10.551
3coy53HPantothenate synthetase6.3.2.10.547
1n2iPAJPantothenate synthetase6.3.2.10.536
5hg0SAMPantothenate synthetase/0.526
3ivgFG5Pantothenate synthetase6.3.2.10.521
1n2jPAFPantothenate synthetase6.3.2.10.519
3imgBZ3Pantothenate synthetase6.3.2.10.513
3imeBZ2Pantothenate synthetase6.3.2.10.510
3imgBZ2Pantothenate synthetase6.3.2.10.484
5kwvANPPantothenate synthetase/0.476
1n2eAPCPantothenate synthetase6.3.2.10.452
1n2gAPCPantothenate synthetase6.3.2.10.451