1.800 Å
X-ray
2009-08-10
| Name: | Pantothenate synthetase |
|---|---|
| ID: | PANC_MYCTU |
| AC: | P9WIL5 |
| Organism: | Mycobacterium tuberculosis |
| Reign: | Bacteria |
| TaxID: | 83332 |
| EC Number: | 6.3.2.1 |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| B | 100 % |
| B-Factor: | 23.957 |
|---|---|
| Number of residues: | 23 |
| Including | |
| Standard Amino Acids: | 20 |
| Non Standard Amino Acids: | 1 |
| Water Molecules: | 2 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.884 | 928.125 |
| % Hydrophobic | % Polar |
|---|---|
| 43.64 | 56.36 |
| According to VolSite | |

| HET Code: | BZ2 |
|---|---|
| Formula: | C9H5O3 |
| Molecular weight: | 161.134 g/mol |
| DrugBank ID: | - |
| Buried Surface Area: | 51.85 % |
| Polar Surface area: | 53.27 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 2 |
| H-Bond Donors: | 0 |
| Rings: | 2 |
| Aromatic rings: | 2 |
| Anionic atoms: | 1 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 1 |
| X | Y | Z |
|---|---|---|
| 2.06508 | -10.6713 | 31.5293 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| CAE | CB | PRO- 38 | 3.88 | 0 | Hydrophobic |
| OAA | N | MET- 40 | 2.91 | 154.61 | H-Bond (Protein Donor) |
| CAK | CG | MET- 40 | 3.76 | 0 | Hydrophobic |
| OAA | NE2 | HIS- 47 | 2.76 | 155.59 | H-Bond (Protein Donor) |
| CAD | CG1 | VAL- 139 | 3.78 | 0 | Hydrophobic |
| CAC | CG1 | VAL- 142 | 4 | 0 | Hydrophobic |
| CAD | CG2 | VAL- 143 | 3.52 | 0 | Hydrophobic |
| OAB | O | HOH- 633 | 3.3 | 179.97 | H-Bond (Protein Donor) |